RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 PSMF1Q92530 271 aa16.55■□□□□ 0.24
HOXA9-201ENST00000343483 SLC25A38Q96DW6 304 aa16.55■□□□□ 0.24
HOXA9-201ENST00000343483 AUNIPQ9H7T9 357 aa16.55■□□□□ 0.24
HOXA9-201ENST00000343483 TMEM165Q9HC07 324 aa16.55■□□□□ 0.24
HOXA9-201ENST00000343483 PLSCR3Q9NRY6 295 aa16.55■□□□□ 0.24
HOXA9-201ENST00000343483 CENPMQ9NSP4 180 aa16.55■□□□□ 0.24
HOXA9-201ENST00000343483 STMN3Q9NZ72 180 aa16.55■□□□□ 0.24
HOXA9-201ENST00000343483 EMC9Q9Y3B6 208 aa16.55■□□□□ 0.24
HOXA9-201ENST00000343483 NUBP2Q9Y5Y2 271 aa16.55■□□□□ 0.24
HOXA9-201ENST00000343483 TRAV8-7A0A075B6U6 113 aa16.54■□□□□ 0.24
HOXA9-201ENST00000343483 A0A0A6YYJ9 748 aa16.54■□□□□ 0.24
HOXA9-201ENST00000343483 LOC101059948A0A1B0GTJ6 334 aa16.54■□□□□ 0.24
HOXA9-201ENST00000343483 MAS1P04201 325 aa16.54■□□□□ 0.24
HOXA9-201ENST00000343483 GIFP27352 417 aa16.54■□□□□ 0.24
HOXA9-201ENST00000343483 LAP3P28838 519 aa16.54■□□□□ 0.24
HOXA9-201ENST00000343483 ZNF239Q16600 458 aaKnown RBP16.54■□□□□ 0.24
HOXA9-201ENST00000343483 NDUFA5Q16718 116 aa16.54■□□□□ 0.24
HOXA9-201ENST00000343483 YRDCQ86U90 279 aaKnown RBP16.54■□□□□ 0.24
HOXA9-201ENST00000343483 DEFB124Q8NES8 71 aa16.54■□□□□ 0.24
HOXA9-201ENST00000343483 OR14L1PQ8NHC6 308 aa16.54■□□□□ 0.24
HOXA9-201ENST00000343483 SLC39A7Q92504 469 aa16.54■□□□□ 0.24
HOXA9-201ENST00000343483 TMEM246Q9BRR3 403 aa16.54■□□□□ 0.24
HOXA9-201ENST00000343483 MRI1Q9BV20 369 aa16.54■□□□□ 0.24
HOXA9-201ENST00000343483 RYDENQ9NUL5 291 aaKnown RBP16.54■□□□□ 0.24
HOXA9-201ENST00000343483 TRBV5-7A0A0A0MS05 114 aa16.54■□□□□ 0.24
HOXA9-201ENST00000343483 TERTO14746 1132 aaKnown RBP16.54■□□□□ 0.24
HOXA9-201ENST00000343483 TNFSF11O14788 317 aa16.54■□□□□ 0.24
HOXA9-201ENST00000343483 RAF1P04049 648 aa16.54■□□□□ 0.24
HOXA9-201ENST00000343483 TCRBP04435 133 aa16.54■□□□□ 0.24
HOXA9-201ENST00000343483 ADRA2CP18825 462 aa16.54■□□□□ 0.24
HOXA9-201ENST00000343483 CLDN17P56750 224 aa16.54■□□□□ 0.24
HOXA9-201ENST00000343483 H3F3AP84243 136 aa16.54■□□□□ 0.24
HOXA9-201ENST00000343483 LRRTM1Q86UE6 522 aa16.54■□□□□ 0.24
HOXA9-201ENST00000343483 ZNF227Q86WZ6 799 aa16.54■□□□□ 0.24
HOXA9-201ENST00000343483 CATSPERDQ86XM0 798 aa16.54■□□□□ 0.24
HOXA9-201ENST00000343483 SERPINA12Q8IW75 414 aa16.54■□□□□ 0.24
HOXA9-201ENST00000343483 ASCC1Q8N9N2 400 aaKnown RBP16.54■□□□□ 0.24
HOXA9-201ENST00000343483 DNAAF1Q8NEP3 725 aa16.54■□□□□ 0.24
HOXA9-201ENST00000343483 UCN2Q96RP3 112 aa16.54■□□□□ 0.24
HOXA9-201ENST00000343483 C7orf50Q9BRJ6 194 aaKnown RBP16.54■□□□□ 0.24
HOXA9-201ENST00000343483 OR5V1Q9UGF6 321 aa16.54■□□□□ 0.24
HOXA9-201ENST00000343483 FREM3P0C091 2139 aa16.53■□□□□ 0.24
HOXA9-201ENST00000343483 CACNA1CQ13936 2221 aa16.53■□□□□ 0.24
HOXA9-201ENST00000343483 LOC102725191A0A1B0GVB3 256 aa16.53■□□□□ 0.24
HOXA9-201ENST00000343483 ANXA2P2A6NMY6 339 aa16.53■□□□□ 0.24
HOXA9-201ENST00000343483 EIF1BO60739 113 aaKnown RBP16.53■□□□□ 0.24
HOXA9-201ENST00000343483 MT-ND4P03905 459 aa16.53■□□□□ 0.24
HOXA9-201ENST00000343483 ANXA2P07355 339 aaKnown RBP16.53■□□□□ 0.24
HOXA9-201ENST00000343483 H2BFMP0C1H6 154 aa16.53■□□□□ 0.24
HOXA9-201ENST00000343483 RFPL3SP0C7P2 107 aa16.53■□□□□ 0.24
HOXA9-201ENST00000343483 CALCBP10092 127 aa16.53■□□□□ 0.24
HOXA9-201ENST00000343483 SRD5A2P31213 254 aa16.53■□□□□ 0.24
HOXA9-201ENST00000343483 CDAP32320 146 aa16.53■□□□□ 0.24
HOXA9-201ENST00000343483 GDNFP39905 211 aa16.53■□□□□ 0.24
HOXA9-201ENST00000343483 RAC1P63000 192 aa16.53■□□□□ 0.24
HOXA9-201ENST00000343483 CSNK2A1P68400 391 aaPredicted RBP16.53■□□□□ 0.24
HOXA9-201ENST00000343483 MFAP5Q13361 173 aa16.53■□□□□ 0.24
HOXA9-201ENST00000343483 KLF9Q13886 244 aaPredicted RBP16.53■□□□□ 0.24
HOXA9-201ENST00000343483 LRFN4Q6PJG9 635 aa16.53■□□□□ 0.24
HOXA9-201ENST00000343483 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.53■□□□□ 0.24
HOXA9-201ENST00000343483 SYNPRQ8TBG9 265 aa16.53■□□□□ 0.24
HOXA9-201ENST00000343483 CACNG6Q9BXT2 260 aa16.53■□□□□ 0.24
HOXA9-201ENST00000343483 DEPPQ9NTK1 212 aa16.53■□□□□ 0.24
HOXA9-201ENST00000343483 DLL3Q9NYJ7 618 aa16.53■□□□□ 0.24
HOXA9-201ENST00000343483 POLR1DQ9Y2S0 133 aa16.53■□□□□ 0.24
HOXA9-201ENST00000343483 R4GMQ9 66 aa16.53■□□□□ 0.24
HOXA9-201ENST00000343483 H0YC42 278 aa16.52■□□□□ 0.24
HOXA9-201ENST00000343483 STMND1H3BQB6 276 aa16.52■□□□□ 0.24
HOXA9-201ENST00000343483 ERP29P30040 261 aaKnown RBP16.52■□□□□ 0.24
HOXA9-201ENST00000343483 MAB21L1Q13394 359 aa16.52■□□□□ 0.24
HOXA9-201ENST00000343483 SPINK14Q6IE38 97 aa16.52■□□□□ 0.24
HOXA9-201ENST00000343483 TMPRSS12Q86WS5 348 aa16.52■□□□□ 0.24
HOXA9-201ENST00000343483 MCHR2Q969V1 340 aa16.52■□□□□ 0.24
HOXA9-201ENST00000343483 S100A16Q96FQ6 103 aaKnown RBP16.52■□□□□ 0.24
HOXA9-201ENST00000343483 EMC7Q9NPA0 242 aa16.52■□□□□ 0.24
HOXA9-201ENST00000343483 COPZ2Q9P299 210 aa16.52■□□□□ 0.24
HOXA9-201ENST00000343483 CYB5R1Q9UHQ9 305 aa16.52■□□□□ 0.24
HOXA9-201ENST00000343483 AHCTF1Q8WYP5 2266 aa16.52■□□□□ 0.24
HOXA9-201ENST00000343483 A0A0J9YW62 118 aa16.52■□□□□ 0.23
HOXA9-201ENST00000343483 LRRC3CA6NJW4 275 aa16.52■□□□□ 0.23
HOXA9-201ENST00000343483 GJE1A6NN92 205 aa16.52■□□□□ 0.23
HOXA9-201ENST00000343483 DOK2O60496 412 aa16.52■□□□□ 0.23
HOXA9-201ENST00000343483 TRAPPC6AO75865 159 aa16.52■□□□□ 0.23
HOXA9-201ENST00000343483 C1QBP02746 253 aa16.52■□□□□ 0.23
HOXA9-201ENST00000343483 QDPRP09417 244 aa16.52■□□□□ 0.23
HOXA9-201ENST00000343483 CCR6P51684 374 aa16.52■□□□□ 0.23
HOXA9-201ENST00000343483 SNTB2Q13425 540 aaKnown RBP16.52■□□□□ 0.23
HOXA9-201ENST00000343483 DYRK1AQ13627 763 aa16.52■□□□□ 0.23
HOXA9-201ENST00000343483 LIX1LQ8IVB5 337 aa16.52■□□□□ 0.23
HOXA9-201ENST00000343483 RNF133Q8WVZ7 376 aa16.52■□□□□ 0.23
HOXA9-201ENST00000343483 GCDHQ92947 438 aaPredicted RBP16.52■□□□□ 0.23
HOXA9-201ENST00000343483 SLAMF6Q96DU3 332 aa16.52■□□□□ 0.23
HOXA9-201ENST00000343483 MED28Q9H204 178 aa16.52■□□□□ 0.23
HOXA9-201ENST00000343483 LRFN1Q9P244 771 aa16.52■□□□□ 0.23
HOXA9-201ENST00000343483 IL17BQ9UHF5 180 aa16.52■□□□□ 0.23
HOXA9-201ENST00000343483 DHDHQ9UQ10 334 aa16.52■□□□□ 0.23
HOXA9-201ENST00000343483 TMEM269A0A1B0GVZ9 245 aa16.51■□□□□ 0.23
HOXA9-201ENST00000343483 NPIPA2E9PIF3 369 aa16.51■□□□□ 0.23
HOXA9-201ENST00000343483 NPIPA3F8WFD2 350 aa16.51■□□□□ 0.23
HOXA9-201ENST00000343483 TLX3O43711 291 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms