RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 MMP16P51512 607 aa17.69■□□□□ 0.42
RTN1-202ENST00000342503 NOVA1P51513 510 aaKnown RBP17.69■□□□□ 0.42
RTN1-202ENST00000342503 SOX8P57073 446 aa17.69■□□□□ 0.42
RTN1-202ENST00000342503 PDSS1Q5T2R2 415 aa17.69■□□□□ 0.42
RTN1-202ENST00000342503 BCL2L15Q5TBC7 163 aa17.69■□□□□ 0.42
RTN1-202ENST00000342503 CCBE1Q6UXH8 406 aaPredicted RBP17.69■□□□□ 0.42
RTN1-202ENST00000342503 FOXL2NBQ6ZUU3 175 aa17.69■□□□□ 0.42
RTN1-202ENST00000342503 ASB5Q8WWX0 329 aa17.69■□□□□ 0.42
RTN1-202ENST00000342503 ZNF845Q96IR2 970 aaPredicted RBP17.69■□□□□ 0.42
RTN1-202ENST00000342503 PCDHGA9Q9Y5G4 932 aaKnown RBP17.69■□□□□ 0.42
RTN1-202ENST00000342503 ARPC4-TTLL3A0A0A6YYG9 625 aa17.68■□□□□ 0.42
RTN1-202ENST00000342503 ZNF878C9JN71 531 aa17.68■□□□□ 0.42
RTN1-202ENST00000342503 CDK2AP1O14519 115 aa17.68■□□□□ 0.42
RTN1-202ENST00000342503 TM4SF5O14894 197 aa17.68■□□□□ 0.42
RTN1-202ENST00000342503 DHHO43323 396 aa17.68■□□□□ 0.42
RTN1-202ENST00000342503 TMEM127O75204 238 aa17.68■□□□□ 0.42
RTN1-202ENST00000342503 SLC43A1O75387 559 aa17.68■□□□□ 0.42
RTN1-202ENST00000342503 GLSO94925 669 aaPredicted RBP17.68■□□□□ 0.42
RTN1-202ENST00000342503 ISG15P05161 165 aa17.68■□□□□ 0.42
RTN1-202ENST00000342503 ACHEP22303 614 aa17.68■□□□□ 0.42
RTN1-202ENST00000342503 PITPNBP48739 271 aa17.68■□□□□ 0.42
RTN1-202ENST00000342503 LHX2P50458 406 aa17.68■□□□□ 0.42
RTN1-202ENST00000342503 ASAH1Q13510 395 aa17.68■□□□□ 0.42
RTN1-202ENST00000342503 TRIQKQ629K1 86 aa17.68■□□□□ 0.42
RTN1-202ENST00000342503 ZNF704Q6ZNC4 412 aaPredicted RBP17.68■□□□□ 0.42
RTN1-202ENST00000342503 TMPRSS7Q7RTY8 843 aa17.68■□□□□ 0.42
RTN1-202ENST00000342503 KCNJ15Q99712 375 aa17.68■□□□□ 0.42
RTN1-202ENST00000342503 ZNF416Q9BWM5 594 aa17.68■□□□□ 0.42
RTN1-202ENST00000342503 RBM24Q9BX46 236 aaKnown RBP17.68■□□□□ 0.42
RTN1-202ENST00000342503 SLC6A15Q9H2J7 730 aa17.68■□□□□ 0.42
RTN1-202ENST00000342503 LOC107986453A0A1B0GWG9 222 aa17.67■□□□□ 0.42
RTN1-202ENST00000342503 ANXA2P2A6NMY6 339 aa17.67■□□□□ 0.42
RTN1-202ENST00000342503 KLRC4-KLRK1H3BQV0 150 aa17.67■□□□□ 0.42
RTN1-202ENST00000342503 P2RY10O00398 339 aa17.67■□□□□ 0.42
RTN1-202ENST00000342503 RER1O15258 196 aa17.67■□□□□ 0.42
RTN1-202ENST00000342503 HLA-DQB1P01920 261 aa17.67■□□□□ 0.42
RTN1-202ENST00000342503 ANXA2P07355 339 aaKnown RBP17.67■□□□□ 0.42
RTN1-202ENST00000342503 CD46P15529 392 aa17.67■□□□□ 0.42
RTN1-202ENST00000342503 MSR1P21757 451 aa17.67■□□□□ 0.42
RTN1-202ENST00000342503 NTF4P34130 210 aa17.67■□□□□ 0.42
RTN1-202ENST00000342503 RFX2P48378 723 aa17.67■□□□□ 0.42
RTN1-202ENST00000342503 CLDN12P56749 244 aa17.67■□□□□ 0.42
RTN1-202ENST00000342503 LSM6P62312 80 aaKnown RBP17.67■□□□□ 0.42
RTN1-202ENST00000342503 UBE2NLQ5JXB2 153 aa17.67■□□□□ 0.42
RTN1-202ENST00000342503 ASPHD2Q6ICH7 369 aa17.67■□□□□ 0.42
RTN1-202ENST00000342503 CPNE4Q96A23 557 aaPredicted RBP17.67■□□□□ 0.42
RTN1-202ENST00000342503 CMTM3Q96MX0 182 aa17.67■□□□□ 0.42
RTN1-202ENST00000342503 ULBP2Q9BZM5 246 aa17.67■□□□□ 0.42
RTN1-202ENST00000342503 NELFAQ9H3P2 528 aa17.67■□□□□ 0.42
RTN1-202ENST00000342503 PNRC2Q9NPJ4 139 aaKnown RBP17.67■□□□□ 0.42
RTN1-202ENST00000342503 HHLA2Q9UM44 414 aa17.67■□□□□ 0.42
RTN1-202ENST00000342503 CNTRLQ7Z7A1 2325 aa17.67■□□□□ 0.42
RTN1-202ENST00000342503 WT1P19544 449 aaPredicted RBP17.67■□□□□ 0.42
RTN1-202ENST00000342503 HSD11B1P28845 292 aa17.67■□□□□ 0.42
RTN1-202ENST00000342503 GUCA1AP43080 201 aaPredicted RBP17.67■□□□□ 0.42
RTN1-202ENST00000342503 TAF13Q15543 124 aa17.67■□□□□ 0.42
RTN1-202ENST00000342503 TMEM244Q5VVB8 128 aa17.67■□□□□ 0.42
RTN1-202ENST00000342503 NRARPQ7Z6K4 114 aa17.67■□□□□ 0.42
RTN1-202ENST00000342503 C19orf18Q8NEA5 215 aa17.67■□□□□ 0.42
RTN1-202ENST00000342503 OR13C3Q8NGS6 347 aa17.67■□□□□ 0.42
RTN1-202ENST00000342503 NABP1Q96AH0 204 aa17.67■□□□□ 0.42
RTN1-202ENST00000342503 WACQ9BTA9 647 aa17.67■□□□□ 0.42
RTN1-202ENST00000342503 PBOV1Q9GZY1 135 aa17.67■□□□□ 0.42
RTN1-202ENST00000342503 IRF2BPLQ9H1B7 796 aa17.67■□□□□ 0.42
RTN1-202ENST00000342503 ZNF552Q9H707 407 aaPredicted RBP17.67■□□□□ 0.42
RTN1-202ENST00000342503 LIN7BQ9HAP6 207 aa17.67■□□□□ 0.42
RTN1-202ENST00000342503 RCE1Q9Y256 329 aa17.67■□□□□ 0.42
RTN1-202ENST00000342503 PLA2G10O15496 165 aa17.66■□□□□ 0.42
RTN1-202ENST00000342503 CYTIPO60759 359 aa17.66■□□□□ 0.42
RTN1-202ENST00000342503 UBCP0CG48 685 aaKnown RBP17.66■□□□□ 0.42
RTN1-202ENST00000342503 ZNF84P51523 738 aa17.66■□□□□ 0.42
RTN1-202ENST00000342503 CLDN18P56856 261 aa17.66■□□□□ 0.42
RTN1-202ENST00000342503 ARG2P78540 354 aa17.66■□□□□ 0.42
RTN1-202ENST00000342503 SRYQ05066 204 aa17.66■□□□□ 0.42
RTN1-202ENST00000342503 ENDOGQ14249 297 aaKnown RBP17.66■□□□□ 0.42
RTN1-202ENST00000342503 PYHIN1Q6K0P9 492 aa17.66■□□□□ 0.42
RTN1-202ENST00000342503 FCRLAQ7L513 359 aa17.66■□□□□ 0.42
RTN1-202ENST00000342503 AAED1Q7RTV5 226 aa17.66■□□□□ 0.42
RTN1-202ENST00000342503 NEDD4LQ96PU5 975 aa17.66■□□□□ 0.42
RTN1-202ENST00000342503 COL25A1Q9BXS0 654 aaPredicted RBP17.66■□□□□ 0.42
RTN1-202ENST00000342503 C11orf54Q9H0W9 315 aaPredicted RBP17.66■□□□□ 0.42
RTN1-202ENST00000342503 OR5V1Q9UGF6 321 aa17.66■□□□□ 0.42
RTN1-202ENST00000342503 TTRP02766 147 aa17.65■□□□□ 0.42
RTN1-202ENST00000342503 CD2P06729 351 aa17.65■□□□□ 0.42
RTN1-202ENST00000342503 ACSM4P0C7M7 580 aa17.65■□□□□ 0.42
RTN1-202ENST00000342503 CALCBP10092 127 aa17.65■□□□□ 0.42
RTN1-202ENST00000342503 PSMA6P60900 246 aaKnown RBP17.65■□□□□ 0.42
RTN1-202ENST00000342503 HYAL4Q2M3T9 481 aa17.65■□□□□ 0.42
RTN1-202ENST00000342503 RHOUQ7L0Q8 258 aa17.65■□□□□ 0.42
RTN1-202ENST00000342503 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.65■□□□□ 0.42
RTN1-202ENST00000342503 ZNF554Q86TJ5 538 aa17.65■□□□□ 0.42
RTN1-202ENST00000342503 ELMOD2Q8IZ81 293 aa17.65■□□□□ 0.42
RTN1-202ENST00000342503 CMTM4Q8IZR5 234 aa17.65■□□□□ 0.42
RTN1-202ENST00000342503 CADM3Q8N126 398 aa17.65■□□□□ 0.42
RTN1-202ENST00000342503 HAS2Q92819 552 aa17.65■□□□□ 0.42
RTN1-202ENST00000342503 ZNF837Q96EG3 531 aaPredicted RBP17.65■□□□□ 0.42
RTN1-202ENST00000342503 ABHD1Q96SE0 405 aa17.65■□□□□ 0.42
RTN1-202ENST00000342503 MRI1Q9BV20 369 aa17.65■□□□□ 0.42
RTN1-202ENST00000342503 NIPAL2Q9H841 368 aa17.65■□□□□ 0.42
RTN1-202ENST00000342503 DLL3Q9NYJ7 618 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms