RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 PMS2P2O95744 297 aa9.66□□□□□ -0.86
RTN3-201ENST00000338850 HRGP04196 525 aa9.66□□□□□ -0.86
RTN3-201ENST00000338850 ALDOBP05062 364 aa9.66□□□□□ -0.86
RTN3-201ENST00000338850 GP1BBP13224 206 aa9.66□□□□□ -0.86
RTN3-201ENST00000338850 CXCR1P25024 350 aa9.66□□□□□ -0.86
RTN3-201ENST00000338850 PGDP52209 483 aa9.66□□□□□ -0.86
RTN3-201ENST00000338850 TAS2R19P59542 299 aa9.66□□□□□ -0.86
RTN3-201ENST00000338850 GPR85P60893 370 aa9.66□□□□□ -0.86
RTN3-201ENST00000338850 TSPAN5P62079 268 aa9.66□□□□□ -0.86
RTN3-201ENST00000338850 MAT1AQ00266 395 aaKnown RBP9.66□□□□□ -0.86
RTN3-201ENST00000338850 WDR38Q5JTN6 314 aa9.66□□□□□ -0.86
RTN3-201ENST00000338850 C1orf100Q5SVJ3 147 aa9.66□□□□□ -0.86
RTN3-201ENST00000338850 SLC25A25Q6KCM7 469 aa9.66□□□□□ -0.86
RTN3-201ENST00000338850 CBLN3Q6UW01 205 aa9.66□□□□□ -0.86
RTN3-201ENST00000338850 CATSPERDQ86XM0 798 aa9.66□□□□□ -0.86
RTN3-201ENST00000338850 IZUMO1Q8IYV9 350 aa9.66□□□□□ -0.86
RTN3-201ENST00000338850 PRSS35Q8N3Z0 413 aa9.66□□□□□ -0.86
RTN3-201ENST00000338850 EIF4E3Q8N5X7 224 aaKnown RBP9.66□□□□□ -0.86
RTN3-201ENST00000338850 CLEC1AQ8NC01 280 aa9.66□□□□□ -0.86
RTN3-201ENST00000338850 ZNF563Q8TA94 476 aa9.66□□□□□ -0.86
RTN3-201ENST00000338850 RNF138Q8WVD3 245 aa9.66□□□□□ -0.86
RTN3-201ENST00000338850 METTL21AQ8WXB1 218 aa9.66□□□□□ -0.86
RTN3-201ENST00000338850 ST8SIA1Q92185 356 aa9.66□□□□□ -0.86
RTN3-201ENST00000338850 TAAR8Q969N4 342 aa9.66□□□□□ -0.86
RTN3-201ENST00000338850 C8orf44Q96CB5 159 aa9.66□□□□□ -0.86
RTN3-201ENST00000338850 FOXRED1Q96CU9 486 aaPredicted RBP9.66□□□□□ -0.86
RTN3-201ENST00000338850 KTI12Q96EK9 354 aaPredicted RBP9.66□□□□□ -0.86
RTN3-201ENST00000338850 CITED4Q96RK1 184 aa9.66□□□□□ -0.86
RTN3-201ENST00000338850 ZNF587Q96SQ5 575 aaPredicted RBP9.66□□□□□ -0.86
RTN3-201ENST00000338850 RBCK1Q9BYM8 510 aa9.66□□□□□ -0.86
RTN3-201ENST00000338850 OR10A4Q9H209 315 aa9.66□□□□□ -0.86
RTN3-201ENST00000338850 APMAPQ9HDC9 416 aa9.66□□□□□ -0.86
RTN3-201ENST00000338850 CUTCQ9NTM9 273 aa9.66□□□□□ -0.86
RTN3-201ENST00000338850 SLC2A8Q9NY64 477 aa9.66□□□□□ -0.86
RTN3-201ENST00000338850 FBLN5Q9UBX5 448 aa9.66□□□□□ -0.86
RTN3-201ENST00000338850 KLK11Q9UBX7 282 aa9.66□□□□□ -0.86
RTN3-201ENST00000338850 OPN4Q9UHM6 478 aa9.66□□□□□ -0.86
RTN3-201ENST00000338850 IKZF2Q9UKS7 526 aa9.66□□□□□ -0.86
RTN3-201ENST00000338850 ZNF346Q9UL40 294 aaKnown RBP9.66□□□□□ -0.86
RTN3-201ENST00000338850 CLEC4AQ9UMR7 237 aa9.66□□□□□ -0.86
RTN3-201ENST00000338850 TRAV8-7A0A075B6U6 113 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 A0A1W2PPL8 197 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 IDSB3KWA1 339 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 MCRIP1C9JLW8 97 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 L7N2F9 121 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 GNB5O14775 395 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 CD74P04233 296 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 LPLP06858 475 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 CTSBP07858 339 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 SFTPCP11686 197 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 RPA2P15927 270 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 PPP3CBP16298 524 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 ZP3P21754 424 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 NFYAP23511 347 aaPredicted RBP9.65□□□□□ -0.86
RTN3-201ENST00000338850 IL12BP29460 328 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 PRSS3P35030 304 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 PTGS2P35354 604 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 RAD52P43351 418 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 POU3F4P49335 361 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 GSK3AP49840 483 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 RIDAP52758 137 aaKnown RBP9.65□□□□□ -0.86
RTN3-201ENST00000338850 GFERP55789 205 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 PSMA6P60900 246 aaKnown RBP9.65□□□□□ -0.86
RTN3-201ENST00000338850 GMFBP60983 142 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 AANATQ16613 207 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 RNASE12Q5GAN4 147 aaKnown RBP9.65□□□□□ -0.86
RTN3-201ENST00000338850 SFRP4Q6FHJ7 346 aaPredicted RBP9.65□□□□□ -0.86
RTN3-201ENST00000338850 RAB12Q6IQ22 244 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 C3P1Q6ZMU1 363 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 ZNF704Q6ZNC4 412 aaPredicted RBP9.65□□□□□ -0.86
RTN3-201ENST00000338850 OVCH2Q7RTZ1 564 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 DPY19L4Q7Z388 723 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 TIPARPQ7Z3E1 657 aaKnown RBP9.65□□□□□ -0.86
RTN3-201ENST00000338850 GPAT4Q86UL3 456 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 COMMD7Q86VX2 200 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 PLXDC1Q8IUK5 500 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 OR8H3Q8N146 312 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 C10orf53Q8N6V4 93 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 DTX3Q8N9I9 347 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 PLPP5Q8NEB5 264 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 OR2AK2Q8NG84 335 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 OR4C16Q8NGL9 310 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 OR52N5Q8NH56 324 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 LRRC20Q8TCA0 184 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 SCARB1Q8WTV0 552 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 TMEM234Q8WY98 164 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 SLC25A28Q96A46 364 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 DACT3Q96B18 629 aaPredicted RBP9.65□□□□□ -0.86
RTN3-201ENST00000338850 FAM3DQ96BQ1 224 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 MS4A3Q96HJ5 214 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 ZPBPQ9BS86 351 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 DPCDQ9BVM2 203 aaPredicted RBP9.65□□□□□ -0.86
RTN3-201ENST00000338850 FAM117AQ9C073 453 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 SYT4Q9H2B2 425 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 CKLFQ9UBR5 152 aa9.65□□□□□ -0.86
RTN3-201ENST00000338850 TMEM184BQ9Y519 407 aaPredicted RBP9.65□□□□□ -0.86
RTN3-201ENST00000338850 LOC101059948A0A1B0GTJ6 334 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 A0A1B0GW55 424 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 hCG_1807616A0A1W2PRN6 198 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 ZNF891A8MT65 544 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms