RNA–Protein interactions for RNA: ENST00000336300.9

MRPL55-202, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-202ENST00000336300 OTPQ5XKR4 325 aa13.61□□□□□ -0.23
MRPL55-202ENST00000336300 SLC18B1Q6NT16 456 aa13.61□□□□□ -0.23
MRPL55-202ENST00000336300 PLBD1Q6P4A8 553 aa13.61□□□□□ -0.23
MRPL55-202ENST00000336300 CORO6Q6QEF8 472 aa13.61□□□□□ -0.23
MRPL55-202ENST00000336300 SYNPRQ8TBG9 265 aa13.61□□□□□ -0.23
MRPL55-202ENST00000336300 COQ7Q99807 217 aa13.61□□□□□ -0.23
MRPL55-202ENST00000336300 VRK1Q99986 396 aaPredicted RBP13.61□□□□□ -0.23
MRPL55-202ENST00000336300 RAB1BQ9H0U4 201 aa13.61□□□□□ -0.23
MRPL55-202ENST00000336300 MS4A5Q9H3V2 200 aa13.61□□□□□ -0.23
MRPL55-202ENST00000336300 DYNLRB1Q9NP97 96 aa13.61□□□□□ -0.23
MRPL55-202ENST00000336300 TUBG2Q9NRH3 451 aa13.61□□□□□ -0.23
MRPL55-202ENST00000336300 MRPL22Q9NWU5 206 aaKnown RBP13.61□□□□□ -0.23
MRPL55-202ENST00000336300 SLCO1C1Q9NYB5 712 aa13.61□□□□□ -0.23
MRPL55-202ENST00000336300 GDF2Q9UK05 429 aaPredicted RBP13.61□□□□□ -0.23
MRPL55-202ENST00000336300 GRIP1Q9Y3R0 1128 aa13.61□□□□□ -0.23
MRPL55-202ENST00000336300 LHFPL6Q9Y693 200 aa13.61□□□□□ -0.23
MRPL55-202ENST00000336300 MAP1AP78559 2803 aaPredicted RBP13.6□□□□□ -0.23
MRPL55-202ENST00000336300 A0A1W2PPW3 197 aa13.6□□□□□ -0.23
MRPL55-202ENST00000336300 ZNF593O00488 134 aaPredicted RBP13.6□□□□□ -0.23
MRPL55-202ENST00000336300 MITFO75030 526 aaPredicted RBP13.6□□□□□ -0.23
MRPL55-202ENST00000336300 GLCEO94923 617 aa13.6□□□□□ -0.23
MRPL55-202ENST00000336300 GSTT1P30711 240 aa13.6□□□□□ -0.23
MRPL55-202ENST00000336300 GGT2P36268 569 aa13.6□□□□□ -0.23
MRPL55-202ENST00000336300 RGS6P49758 472 aa13.6□□□□□ -0.23
MRPL55-202ENST00000336300 ENTPD1P49961 510 aa13.6□□□□□ -0.23
MRPL55-202ENST00000336300 PPOXP50336 477 aa13.6□□□□□ -0.23
MRPL55-202ENST00000336300 NUDT6P53370 316 aa13.6□□□□□ -0.23
MRPL55-202ENST00000336300 KLF3P57682 345 aaPredicted RBP13.6□□□□□ -0.23
MRPL55-202ENST00000336300 HIST1H3AP68431 136 aa13.6□□□□□ -0.23
MRPL55-202ENST00000336300 PPP2R2BQ00005 443 aa13.6□□□□□ -0.23
MRPL55-202ENST00000336300 KLHL12Q53G59 568 aa13.6□□□□□ -0.23
MRPL55-202ENST00000336300 SLC35D3Q5M8T2 416 aa13.6□□□□□ -0.23
MRPL55-202ENST00000336300 HIST2H3PS2Q5TEC6 136 aa13.6□□□□□ -0.23
MRPL55-202ENST00000336300 TMEM154Q6P9G4 183 aa13.6□□□□□ -0.23
MRPL55-202ENST00000336300 HIST2H3AQ71DI3 136 aa13.6□□□□□ -0.23
MRPL55-202ENST00000336300 TGIF2LYQ8IUE0 185 aa13.6□□□□□ -0.23
MRPL55-202ENST00000336300 CPOQ8IVL8 374 aa13.6□□□□□ -0.23
MRPL55-202ENST00000336300 LINC00346Q8IVM7 164 aa13.6□□□□□ -0.23
MRPL55-202ENST00000336300 OR5L1Q8NGL2 311 aa13.6□□□□□ -0.23
MRPL55-202ENST00000336300 ABHD4Q8TB40 342 aa13.6□□□□□ -0.23
MRPL55-202ENST00000336300 PTP4A1Q93096 173 aa13.6□□□□□ -0.23
MRPL55-202ENST00000336300 DOK1Q99704 481 aa13.6□□□□□ -0.23
MRPL55-202ENST00000336300 CIB1Q99828 191 aa13.6□□□□□ -0.23
MRPL55-202ENST00000336300 SYT3Q9BQG1 590 aa13.6□□□□□ -0.23
MRPL55-202ENST00000336300 C9orf16Q9BUW7 83 aa13.6□□□□□ -0.23
MRPL55-202ENST00000336300 MRPL37Q9BZE1 423 aaKnown RBP13.6□□□□□ -0.23
MRPL55-202ENST00000336300 MED20Q9H944 212 aa13.6□□□□□ -0.23
MRPL55-202ENST00000336300 TBCCD1Q9NVR7 557 aa13.6□□□□□ -0.23
MRPL55-202ENST00000336300 H2AFY2Q9P0M6 372 aaPredicted RBP13.6□□□□□ -0.23
MRPL55-202ENST00000336300 ARID1AO14497 2285 aa13.6□□□□□ -0.23
MRPL55-202ENST00000336300 PRODHO43272 600 aa13.59□□□□□ -0.23
MRPL55-202ENST00000336300 ICMTO60725 284 aa13.59□□□□□ -0.23
MRPL55-202ENST00000336300 BAG2O95816 211 aa13.59□□□□□ -0.23
MRPL55-202ENST00000336300 F12P00748 615 aaPredicted RBP13.59□□□□□ -0.23
MRPL55-202ENST00000336300 MT-ND5P03915 603 aa13.59□□□□□ -0.23
MRPL55-202ENST00000336300 SPARCP09486 303 aa13.59□□□□□ -0.23
MRPL55-202ENST00000336300 CLUP10909 449 aa13.59□□□□□ -0.23
MRPL55-202ENST00000336300 ZNF250P15622 560 aa13.59□□□□□ -0.23
MRPL55-202ENST00000336300 WNT5AP41221 380 aa13.59□□□□□ -0.23
MRPL55-202ENST00000336300 EFNA4P52798 201 aa13.59□□□□□ -0.23
MRPL55-202ENST00000336300 RAD23AP54725 363 aa13.59□□□□□ -0.23
MRPL55-202ENST00000336300 RPS7P62081 194 aaKnown RBP13.59□□□□□ -0.23
MRPL55-202ENST00000336300 DBPQ10586 325 aaPredicted RBP13.59□□□□□ -0.23
MRPL55-202ENST00000336300 NKPD1Q17RQ9 610 aa13.59□□□□□ -0.23
MRPL55-202ENST00000336300 TEX30Q5JUR7 227 aa13.59□□□□□ -0.23
MRPL55-202ENST00000336300 CXXC5Q7LFL8 322 aaKnown RBP13.59□□□□□ -0.23
MRPL55-202ENST00000336300 SHFQ7M4L6 423 aa13.59□□□□□ -0.23
MRPL55-202ENST00000336300 ZNF511Q8NB15 262 aa13.59□□□□□ -0.23
MRPL55-202ENST00000336300 SNX33Q8WV41 574 aa13.59□□□□□ -0.23
MRPL55-202ENST00000336300 ZNRF4Q8WWF5 429 aa13.59□□□□□ -0.23
MRPL55-202ENST00000336300 INTS14Q96SY0 518 aa13.59□□□□□ -0.23
MRPL55-202ENST00000336300 ATF6BQ99941 703 aa13.59□□□□□ -0.23
MRPL55-202ENST00000336300 RIBC2Q9H4K1 309 aa13.59□□□□□ -0.23
MRPL55-202ENST00000336300 WDR76Q9H967 626 aa13.59□□□□□ -0.23
MRPL55-202ENST00000336300 FZR1Q9UM11 496 aa13.59□□□□□ -0.23
MRPL55-202ENST00000336300 COMMD3-BMI1R4GMX3 469 aa13.59□□□□□ -0.23
MRPL55-202ENST00000336300 PRRC2AP48634 2157 aaKnown RBP13.59□□□□□ -0.23
MRPL55-202ENST00000336300 VPS13CQ709C8 3753 aa13.58□□□□□ -0.23
MRPL55-202ENST00000336300 USF3Q68DE3 2245 aa13.58□□□□□ -0.24
MRPL55-202ENST00000336300 TMEM129A0AVI4 362 aa13.58□□□□□ -0.24
MRPL55-202ENST00000336300 ZAR1LA6NP61 321 aa13.58□□□□□ -0.24
MRPL55-202ENST00000336300 H3BSA7 217 aa13.58□□□□□ -0.24
MRPL55-202ENST00000336300 J3QW42 95 aa13.58□□□□□ -0.24
MRPL55-202ENST00000336300 M0R233 179 aa13.58□□□□□ -0.24
MRPL55-202ENST00000336300 SSX4O60224 188 aa13.58□□□□□ -0.24
MRPL55-202ENST00000336300 IGHV4-39P01824 125 aa13.58□□□□□ -0.24
MRPL55-202ENST00000336300 ADRA2AP08913 450 aa13.58□□□□□ -0.24
MRPL55-202ENST00000336300 ALDH3A2P51648 485 aa13.58□□□□□ -0.24
MRPL55-202ENST00000336300 DSCR9P59020 149 aa13.58□□□□□ -0.24
MRPL55-202ENST00000336300 PPP1CBP62140 327 aa13.58□□□□□ -0.24
MRPL55-202ENST00000336300 TAF13Q15543 124 aa13.58□□□□□ -0.24
MRPL55-202ENST00000336300 CLEC12BQ2HXU8 276 aa13.58□□□□□ -0.24
MRPL55-202ENST00000336300 SLX4IPQ5VYV7 408 aa13.58□□□□□ -0.24
MRPL55-202ENST00000336300 DCXRQ7Z4W1 244 aa13.58□□□□□ -0.24
MRPL55-202ENST00000336300 ERI1Q8IV48 349 aaKnown RBP13.58□□□□□ -0.24
MRPL55-202ENST00000336300 ZNF101Q8IZC7 436 aa13.58□□□□□ -0.24
MRPL55-202ENST00000336300 PQLC1Q8N2U9 271 aa13.58□□□□□ -0.24
MRPL55-202ENST00000336300 WFDC11Q8NEX6 87 aa13.58□□□□□ -0.24
MRPL55-202ENST00000336300 SPTSSAQ969W0 71 aa13.58□□□□□ -0.24
MRPL55-202ENST00000336300 Q96MF0 132 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms