RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 CDAP32320 146 aa13.23□□□□□ -0.29
CLCNKA-201ENST00000331433 CLRN1P58418 232 aa13.23□□□□□ -0.29
CLCNKA-201ENST00000331433 IL11RAQ14626 422 aa13.23□□□□□ -0.29
CLCNKA-201ENST00000331433 TMEM176BQ3YBM2 270 aaPredicted RBP13.23□□□□□ -0.29
CLCNKA-201ENST00000331433 OR10K2Q6IF99 312 aa13.23□□□□□ -0.29
CLCNKA-201ENST00000331433 OR10S1Q8NGN2 331 aa13.23□□□□□ -0.29
CLCNKA-201ENST00000331433 IER2Q9BTL4 223 aa13.23□□□□□ -0.29
CLCNKA-201ENST00000331433 METTL17Q9H7H0 456 aaPredicted RBP13.23□□□□□ -0.29
CLCNKA-201ENST00000331433 SEC61A2Q9H9S3 476 aa13.23□□□□□ -0.29
CLCNKA-201ENST00000331433 KLHL13Q9P2N7 655 aa13.23□□□□□ -0.29
CLCNKA-201ENST00000331433 GPN3Q9UHW5 284 aaPredicted RBP13.23□□□□□ -0.29
CLCNKA-201ENST00000331433 PTRH2Q9Y3E5 179 aaKnown RBP13.23□□□□□ -0.29
CLCNKA-201ENST00000331433 TRAF3IP2O43734 574 aaPredicted RBP13.23□□□□□ -0.29
CLCNKA-201ENST00000331433 PRAF2O60831 178 aa13.23□□□□□ -0.29
CLCNKA-201ENST00000331433 NDUFB6O95139 128 aa13.23□□□□□ -0.29
CLCNKA-201ENST00000331433 ISG15P05161 165 aa13.23□□□□□ -0.29
CLCNKA-201ENST00000331433 METTL11BQ5VVY1 283 aa13.23□□□□□ -0.29
CLCNKA-201ENST00000331433 ZNF704Q6ZNC4 412 aaPredicted RBP13.23□□□□□ -0.29
CLCNKA-201ENST00000331433 CREB3L2Q70SY1 520 aa13.23□□□□□ -0.29
CLCNKA-201ENST00000331433 ZNF436Q9C0F3 470 aaPredicted RBP13.23□□□□□ -0.29
CLCNKA-201ENST00000331433 WDR54Q9H977 334 aa13.23□□□□□ -0.29
CLCNKA-201ENST00000331433 FAM206AQ9NX38 181 aa13.23□□□□□ -0.29
CLCNKA-201ENST00000331433 MASP2O00187 686 aa13.22□□□□□ -0.29
CLCNKA-201ENST00000331433 TPPPO94811 219 aa13.22□□□□□ -0.29
CLCNKA-201ENST00000331433 TOXO94900 526 aa13.22□□□□□ -0.29
CLCNKA-201ENST00000331433 ACSM4P0C7M7 580 aa13.22□□□□□ -0.29
CLCNKA-201ENST00000331433 PGA4P0DJD7 388 aa13.22□□□□□ -0.29
CLCNKA-201ENST00000331433 PGA3P0DJD8 388 aa13.22□□□□□ -0.29
CLCNKA-201ENST00000331433 LAP3P28838 519 aa13.22□□□□□ -0.29
CLCNKA-201ENST00000331433 ANGPT1Q15389 498 aa13.22□□□□□ -0.29
CLCNKA-201ENST00000331433 DEGS2Q6QHC5 323 aa13.22□□□□□ -0.29
CLCNKA-201ENST00000331433 FAM198BQ6UWH4 519 aa13.22□□□□□ -0.29
CLCNKA-201ENST00000331433 GLDNQ6ZMI3 551 aaPredicted RBP13.22□□□□□ -0.29
CLCNKA-201ENST00000331433 CFAP77Q6ZQR2 320 aa13.22□□□□□ -0.29
CLCNKA-201ENST00000331433 ZNF627Q7L945 461 aa13.22□□□□□ -0.29
CLCNKA-201ENST00000331433 NOXO1Q8NFA2 376 aa13.22□□□□□ -0.29
CLCNKA-201ENST00000331433 OR8S1Q8NH09 359 aa13.22□□□□□ -0.29
CLCNKA-201ENST00000331433 DVL3Q92997 716 aaPredicted RBP13.22□□□□□ -0.29
CLCNKA-201ENST00000331433 ZNF69Q9UC07 566 aa13.22□□□□□ -0.29
CLCNKA-201ENST00000331433 RTTNQ86VV8 2226 aa13.22□□□□□ -0.29
CLCNKA-201ENST00000331433 IGHV1-45A0A0A0MS14 117 aa13.22□□□□□ -0.29
CLCNKA-201ENST00000331433 A0A1B0GVI7 797 aa13.22□□□□□ -0.29
CLCNKA-201ENST00000331433 PYCARD-AS1I3L0S3 204 aa13.22□□□□□ -0.29
CLCNKA-201ENST00000331433 ERVH48-1M5A8F1 160 aa13.22□□□□□ -0.29
CLCNKA-201ENST00000331433 IGHG1P01857 330 aa13.22□□□□□ -0.29
CLCNKA-201ENST00000331433 TTRP02766 147 aa13.22□□□□□ -0.29
CLCNKA-201ENST00000331433 KLK3P07288 261 aaPredicted RBP13.22□□□□□ -0.29
CLCNKA-201ENST00000331433 GTF2F2P13984 249 aa13.22□□□□□ -0.29
CLCNKA-201ENST00000331433 PRSS3P35030 304 aa13.22□□□□□ -0.29
CLCNKA-201ENST00000331433 MMP16P51512 607 aa13.22□□□□□ -0.29
CLCNKA-201ENST00000331433 THEM4Q5T1C6 240 aa13.22□□□□□ -0.29
CLCNKA-201ENST00000331433 TMEM244Q5VVB8 128 aa13.22□□□□□ -0.29
CLCNKA-201ENST00000331433 SEZ6L2Q6UXD5 910 aa13.22□□□□□ -0.29
CLCNKA-201ENST00000331433 NLRC3Q7RTR2 1065 aa13.22□□□□□ -0.29
CLCNKA-201ENST00000331433 FADS6Q8N9I5 356 aa13.22□□□□□ -0.29
CLCNKA-201ENST00000331433 OR6M1Q8NGM8 313 aa13.22□□□□□ -0.29
CLCNKA-201ENST00000331433 OR2T35Q8NGX2 323 aa13.22□□□□□ -0.29
CLCNKA-201ENST00000331433 FGGYQ96C11 551 aa13.22□□□□□ -0.29
CLCNKA-201ENST00000331433 CHIAQ9BZP6 476 aa13.22□□□□□ -0.29
CLCNKA-201ENST00000331433 PTGES2Q9H7Z7 377 aa13.22□□□□□ -0.29
CLCNKA-201ENST00000331433 ZMAT3Q9HA38 289 aaKnown RBP13.22□□□□□ -0.29
CLCNKA-201ENST00000331433 EMC3Q9P0I2 261 aa13.22□□□□□ -0.29
CLCNKA-201ENST00000331433 POLR1DQ9Y2S0 133 aa13.22□□□□□ -0.29
CLCNKA-201ENST00000331433 LHFPL6Q9Y693 200 aa13.22□□□□□ -0.29
CLCNKA-201ENST00000331433 LOC102723996A0A087X1L8 192 aa13.21□□□□□ -0.29
CLCNKA-201ENST00000331433 ARPC4-TTLL3A0A0A6YYG9 625 aa13.21□□□□□ -0.29
CLCNKA-201ENST00000331433 C19orf67A6NJJ6 358 aa13.21□□□□□ -0.29
CLCNKA-201ENST00000331433 G3V3Y1 287 aa13.21□□□□□ -0.29
CLCNKA-201ENST00000331433 TP53I11O14683 189 aa13.21□□□□□ -0.29
CLCNKA-201ENST00000331433 YKT6O15498 198 aa13.21□□□□□ -0.29
CLCNKA-201ENST00000331433 LAMTOR5O43504 91 aa13.21□□□□□ -0.29
CLCNKA-201ENST00000331433 KLF7O75840 302 aaPredicted RBP13.21□□□□□ -0.29
CLCNKA-201ENST00000331433 CSF1P09603 554 aa13.21□□□□□ -0.29
CLCNKA-201ENST00000331433 UBCP0CG48 685 aaKnown RBP13.21□□□□□ -0.29
CLCNKA-201ENST00000331433 COX6A1P12074 109 aa13.21□□□□□ -0.29
CLCNKA-201ENST00000331433 DNASE1P24855 282 aa13.21□□□□□ -0.29
CLCNKA-201ENST00000331433 ZNF782Q6ZMW2 699 aaPredicted RBP13.21□□□□□ -0.29
CLCNKA-201ENST00000331433 CDH24Q86UP0 819 aa13.21□□□□□ -0.29
CLCNKA-201ENST00000331433 AGBL5Q8NDL9 886 aa13.21□□□□□ -0.29
CLCNKA-201ENST00000331433 OR52B4Q8NGK2 314 aa13.21□□□□□ -0.29
CLCNKA-201ENST00000331433 C1orf198Q9H425 327 aa13.21□□□□□ -0.29
CLCNKA-201ENST00000331433 SLC17A5Q9NRA2 495 aa13.21□□□□□ -0.29
CLCNKA-201ENST00000331433 CA10Q9NS85 328 aa13.21□□□□□ -0.29
CLCNKA-201ENST00000331433 NXT1Q9UKK6 140 aaKnown RBP13.21□□□□□ -0.29
CLCNKA-201ENST00000331433 G3V3Q6 166 aa13.21□□□□□ -0.29
CLCNKA-201ENST00000331433 NTN3O00634 580 aaPredicted RBP13.21□□□□□ -0.29
CLCNKA-201ENST00000331433 CD3DP04234 171 aa13.21□□□□□ -0.29
CLCNKA-201ENST00000331433 FAUP35544 74 aaKnown RBP13.21□□□□□ -0.29
CLCNKA-201ENST00000331433 TRIM61Q5EBN2 209 aa13.21□□□□□ -0.29
CLCNKA-201ENST00000331433 KLHL24Q6TFL4 600 aa13.21□□□□□ -0.29
CLCNKA-201ENST00000331433 MAML2Q8IZL2 1156 aaPredicted RBP13.21□□□□□ -0.29
CLCNKA-201ENST00000331433 DEFB123Q8N688 67 aa13.21□□□□□ -0.29
CLCNKA-201ENST00000331433 OR4D6Q8NGJ1 314 aa13.21□□□□□ -0.29
CLCNKA-201ENST00000331433 GPR137Q96N19 417 aa13.21□□□□□ -0.29
CLCNKA-201ENST00000331433 GINS4Q9BRT9 223 aa13.21□□□□□ -0.29
CLCNKA-201ENST00000331433 PBOV1Q9GZY1 135 aa13.21□□□□□ -0.29
CLCNKA-201ENST00000331433 NPDC1Q9NQX5 325 aaPredicted RBP13.21□□□□□ -0.29
CLCNKA-201ENST00000331433 SCP2D1Q9UJQ7 156 aa13.21□□□□□ -0.29
CLCNKA-201ENST00000331433 GDF2Q9UK05 429 aaPredicted RBP13.21□□□□□ -0.29
CLCNKA-201ENST00000331433 ELF5Q9UKW6 265 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms