RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 PRAMEF26H0Y7S4 382 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 H0YIZ8 118 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 LDLRAD4O15165 306 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 OR5AC1P0C628 307 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 DANCRP0C864 163 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 CYBAP13498 195 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 HIST1H1CP16403 213 aaKnown RBP7.56□□□□□ -1.2
SKA2-201ENST00000330137 SSR2P43308 183 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 EFNB2P52799 333 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 SNRPNP63162 240 aaKnown RBP7.56□□□□□ -1.2
SKA2-201ENST00000330137 EXOSC6Q5RKV6 272 aaKnown RBP7.56□□□□□ -1.2
SKA2-201ENST00000330137 YOD1Q5VVQ6 348 aaPredicted RBP7.56□□□□□ -1.2
SKA2-201ENST00000330137 ZNF529Q6P280 563 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 OLIG3Q7RTU3 272 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 LRRTM4Q86VH4 590 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 EXD3Q8N9H8 876 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 RNF128Q8TEB7 428 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 AQP3Q92482 292 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 KTI12Q96EK9 354 aaPredicted RBP7.56□□□□□ -1.2
SKA2-201ENST00000330137 CCNL2Q96S94 520 aaPredicted RBP7.56□□□□□ -1.2
SKA2-201ENST00000330137 GPR61Q9BZJ8 451 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 TMEM242Q9NWH2 141 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 VSX1Q9NZR4 365 aaPredicted RBP7.56□□□□□ -1.2
SKA2-201ENST00000330137 PRODH2Q9UF12 536 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 PITPNC1Q9UKF7 332 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 KCNK6Q9Y257 313 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 ENTPD2Q9Y5L3 495 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 C9J4A7 227 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 FCMRO60667 390 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 HIST1H2BKO60814 126 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 GPANK1O95872 356 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 GYPBP06028 91 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 HIST1H2BJP06899 126 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 ERCC1P07992 297 aaPredicted RBP7.56□□□□□ -1.2
SKA2-201ENST00000330137 AKR1A1P14550 325 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 FOLR1P15328 257 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 HIST1H2BOP23527 126 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 HIST1H2BBP33778 126 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 NAA10P41227 235 aaPredicted RBP7.56□□□□□ -1.2
SKA2-201ENST00000330137 HIST1H2BDP58876 126 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 HIST1H2BCP62807 126 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 ZIC1Q15915 447 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 HIST2H2BEQ16778 126 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 KHDC3LQ587J8 217 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.56□□□□□ -1.2
SKA2-201ENST00000330137 LINC00114Q6XXX2 140 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 SLC35D2Q76EJ3 337 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 HSD11B1LQ7Z5J1 315 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 ADGRE4PQ86SQ3 457 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 OR10AD1Q8NGE0 317 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 METTL21AQ8WXB1 218 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 HIST1H2BHQ93079 126 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 TMEM106AQ96A25 262 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 ZNF681Q96N22 645 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 CASD1Q96PB1 797 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 TNFRSF13CQ96RJ3 184 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 HIST1H2BNQ99877 126 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 HIST1H2BMQ99879 126 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 CNTNAP3Q9BZ76 1288 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 ZDHHC8Q9ULC8 765 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 ZNF780BQ9Y6R6 833 aa7.56□□□□□ -1.2
SKA2-201ENST00000330137 TRAV8-7A0A075B6U6 113 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 TRAV27A0A087WT01 109 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 ZNF726A6NNF4 738 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 M0QYG6 137 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 ALOX12BO75342 701 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 SFT2D2O95562 160 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 MAS1P04201 325 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 OR8U9P0C7N5 309 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 CASP6P55212 293 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 SKP1P63208 163 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 TSTA3Q13630 321 aaPredicted RBP7.55□□□□□ -1.2
SKA2-201ENST00000330137 SLC10A1Q14973 349 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 USF2Q15853 346 aaPredicted RBP7.55□□□□□ -1.2
SKA2-201ENST00000330137 SCGB2B2Q4G0G5 96 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 THEM4Q5T1C6 240 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 AKR1C8PQ5T2L2 129 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 LINC01590Q5TEZ4 76 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 TPGS2Q68CL5 300 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 OR2A2Q6IF42 318 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 HOGA1Q86XE5 327 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 OR8U1Q8NH10 309 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 WFDC5Q8TCV5 224 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 SMARCD2Q92925 531 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 SCAMP4Q969E2 229 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 DCBLD2Q96PD2 775 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 SDF2Q99470 211 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 TRIM2Q9C040 744 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 WNT5BQ9H1J7 359 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 PLEKHA2Q9HB19 425 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 SLC23A2Q9UGH3 650 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 CD84Q9UIB8 345 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 TRDCB7Z8K6 153 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 NARSO43776 548 aaKnown RBP7.55□□□□□ -1.2
SKA2-201ENST00000330137 RPS2P15880 293 aaKnown RBP7.55□□□□□ -1.2
SKA2-201ENST00000330137 AK4P27144 223 aaPredicted RBP7.55□□□□□ -1.2
SKA2-201ENST00000330137 CD52P31358 61 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 THBS4P35443 961 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 ZNF84P51523 738 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 PRPS1P60891 318 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms