RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 PEX12O00623 359 aa10.71□□□□□ -0.7
SHMT2-201ENST00000328923 TSPAN2O60636 221 aa10.71□□□□□ -0.7
SHMT2-201ENST00000328923 SCGNO76038 276 aa10.71□□□□□ -0.7
SHMT2-201ENST00000328923 SCAF4O95104 1147 aaKnown RBP10.71□□□□□ -0.7
SHMT2-201ENST00000328923 MRPL3P09001 348 aaKnown RBP10.71□□□□□ -0.7
SHMT2-201ENST00000328923 IGFALSP35858 605 aa10.71□□□□□ -0.7
SHMT2-201ENST00000328923 NR0B2Q15466 257 aa10.71□□□□□ -0.7
SHMT2-201ENST00000328923 GUK1Q16774 197 aa10.71□□□□□ -0.7
SHMT2-201ENST00000328923 PRAMEF14Q5SWL7 426 aa10.71□□□□□ -0.7
SHMT2-201ENST00000328923 OR2L3Q8NG85 312 aa10.71□□□□□ -0.7
SHMT2-201ENST00000328923 MRGPRDQ8TDS7 321 aa10.71□□□□□ -0.7
SHMT2-201ENST00000328923 METTL21AQ8WXB1 218 aa10.71□□□□□ -0.7
SHMT2-201ENST00000328923 AUTS2Q8WXX7 1259 aa10.71□□□□□ -0.7
SHMT2-201ENST00000328923 SUSD6Q92537 303 aa10.71□□□□□ -0.7
SHMT2-201ENST00000328923 TAAR8Q969N4 342 aa10.71□□□□□ -0.7
SHMT2-201ENST00000328923 SLC41A3Q96GZ6 507 aa10.71□□□□□ -0.7
SHMT2-201ENST00000328923 ZNF587Q96SQ5 575 aaPredicted RBP10.71□□□□□ -0.7
SHMT2-201ENST00000328923 MFRPQ9BY79 579 aa10.71□□□□□ -0.7
SHMT2-201ENST00000328923 EIF5A2Q9GZV4 153 aaKnown RBP10.71□□□□□ -0.7
SHMT2-201ENST00000328923 MTFP1Q9UDX5 166 aa10.71□□□□□ -0.7
SHMT2-201ENST00000328923 OR5V1Q9UGF6 321 aa10.71□□□□□ -0.7
SHMT2-201ENST00000328923 RNF24Q9Y225 148 aa10.71□□□□□ -0.7
SHMT2-201ENST00000328923 FARSAQ9Y285 508 aaKnown RBP10.71□□□□□ -0.7
SHMT2-201ENST00000328923 COL4A6Q14031 1691 aa10.7□□□□□ -0.7
SHMT2-201ENST00000328923 CCDC163A0A0D9SF12 145 aa10.7□□□□□ -0.7
SHMT2-201ENST00000328923 IFITM5A6NNB3 132 aa10.7□□□□□ -0.7
SHMT2-201ENST00000328923 MASP2O00187 686 aa10.7□□□□□ -0.7
SHMT2-201ENST00000328923 HLA-AP01891 365 aaKnown RBP10.7□□□□□ -0.7
SHMT2-201ENST00000328923 CATP04040 527 aaKnown RBP10.7□□□□□ -0.7
SHMT2-201ENST00000328923 SERPINA4P29622 427 aa10.7□□□□□ -0.7
SHMT2-201ENST00000328923 PYCR1P32322 319 aa10.7□□□□□ -0.7
SHMT2-201ENST00000328923 BMI1P35226 326 aa10.7□□□□□ -0.7
SHMT2-201ENST00000328923 PPM1FP49593 454 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-201ENST00000328923 PRSS53Q2L4Q9 553 aa10.7□□□□□ -0.7
SHMT2-201ENST00000328923 DMKNQ6E0U4 476 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-201ENST00000328923 ZNF836Q6ZNA1 936 aa10.7□□□□□ -0.7
SHMT2-201ENST00000328923 GCNT2Q8N0V5 402 aa10.7□□□□□ -0.7
SHMT2-201ENST00000328923 GJD3Q8N144 294 aa10.7□□□□□ -0.7
SHMT2-201ENST00000328923 C10orf53Q8N6V4 93 aa10.7□□□□□ -0.7
SHMT2-201ENST00000328923 OR4K15Q8NH41 348 aa10.7□□□□□ -0.7
SHMT2-201ENST00000328923 NEIL2Q969S2 332 aa10.7□□□□□ -0.7
SHMT2-201ENST00000328923 VWCEQ96DN2 955 aa10.7□□□□□ -0.7
SHMT2-201ENST00000328923 SCRT1Q9BWW7 348 aa10.7□□□□□ -0.7
SHMT2-201ENST00000328923 GPR87Q9BY21 358 aa10.7□□□□□ -0.7
SHMT2-201ENST00000328923 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.7□□□□□ -0.7
SHMT2-201ENST00000328923 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.7□□□□□ -0.7
SHMT2-201ENST00000328923 STEAP1Q9UHE8 339 aa10.7□□□□□ -0.7
SHMT2-201ENST00000328923 ZFP30Q9Y2G7 519 aa10.7□□□□□ -0.7
SHMT2-201ENST00000328923 ANAPC1Q9H1A4 1944 aa10.7□□□□□ -0.7
SHMT2-201ENST00000328923 CDHR4A6H8M9 788 aa10.69□□□□□ -0.7
SHMT2-201ENST00000328923 HMGN4O00479 90 aa10.69□□□□□ -0.7
SHMT2-201ENST00000328923 PLRG1O43660 514 aaKnown RBP10.69□□□□□ -0.7
SHMT2-201ENST00000328923 GPANK1O95872 356 aa10.69□□□□□ -0.7
SHMT2-201ENST00000328923 AKAIN1P0CW23 69 aa10.69□□□□□ -0.7
SHMT2-201ENST00000328923 PGA4P0DJD7 388 aa10.69□□□□□ -0.7
SHMT2-201ENST00000328923 PGA5P0DJD9 388 aa10.69□□□□□ -0.7
SHMT2-201ENST00000328923 IMPA1P29218 277 aa10.69□□□□□ -0.7
SHMT2-201ENST00000328923 SUCLG1P53597 346 aaKnown RBP10.69□□□□□ -0.7
SHMT2-201ENST00000328923 RGS8P57771 180 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-201ENST00000328923 Q5PR19 223 aa10.69□□□□□ -0.7
SHMT2-201ENST00000328923 OVCH1Q7RTY7 1134 aa10.69□□□□□ -0.7
SHMT2-201ENST00000328923 HMGN2P46Q86SG4 172 aa10.69□□□□□ -0.7
SHMT2-201ENST00000328923 SFXN5Q8TD22 340 aa10.69□□□□□ -0.7
SHMT2-201ENST00000328923 ZBTB8AQ96BR9 441 aa10.69□□□□□ -0.7
SHMT2-201ENST00000328923 HAVCR1Q96D42 359 aa10.69□□□□□ -0.7
SHMT2-201ENST00000328923 ALG14Q96F25 216 aa10.69□□□□□ -0.7
SHMT2-201ENST00000328923 RCC1LQ96I51 464 aaKnown RBP10.69□□□□□ -0.7
SHMT2-201ENST00000328923 MYADMQ96S97 322 aa10.69□□□□□ -0.7
SHMT2-201ENST00000328923 ZNF2Q9BSG1 426 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-201ENST00000328923 POTEKPQ9BYX7 375 aa10.69□□□□□ -0.7
SHMT2-201ENST00000328923 CAPN10Q9HC96 672 aa10.69□□□□□ -0.7
SHMT2-201ENST00000328923 PRM3Q9NNZ6 103 aa10.69□□□□□ -0.7
SHMT2-201ENST00000328923 PARP11Q9NR21 331 aa10.69□□□□□ -0.7
SHMT2-201ENST00000328923 V9GYS6 101 aa10.69□□□□□ -0.7
SHMT2-201ENST00000328923 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-201ENST00000328923 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-201ENST00000328923 C20orf202A1L168 122 aa10.69□□□□□ -0.7
SHMT2-201ENST00000328923 K7EP13 123 aa10.69□□□□□ -0.7
SHMT2-201ENST00000328923 ARL6IP5O75915 188 aa10.69□□□□□ -0.7
SHMT2-201ENST00000328923 GJB5O95377 273 aa10.69□□□□□ -0.7
SHMT2-201ENST00000328923 CNOT4O95628 575 aaKnown RBP10.69□□□□□ -0.7
SHMT2-201ENST00000328923 CST2P09228 141 aa10.69□□□□□ -0.7
SHMT2-201ENST00000328923 CSF1P09603 554 aa10.69□□□□□ -0.7
SHMT2-201ENST00000328923 PNLIPP16233 465 aa10.69□□□□□ -0.7
SHMT2-201ENST00000328923 TNFSF10P50591 281 aa10.69□□□□□ -0.7
SHMT2-201ENST00000328923 IDH3GP51553 393 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-201ENST00000328923 SELENOTP62341 195 aa10.69□□□□□ -0.7
SHMT2-201ENST00000328923 SNRPNP63162 240 aaKnown RBP10.69□□□□□ -0.7
SHMT2-201ENST00000328923 SYPL1Q16563 259 aa10.69□□□□□ -0.7
SHMT2-201ENST00000328923 EIF5AL1Q6IS14 154 aaKnown RBP10.69□□□□□ -0.7
SHMT2-201ENST00000328923 CNKSR3Q6P9H4 555 aa10.69□□□□□ -0.7
SHMT2-201ENST00000328923 C17orf64Q86WR6 236 aa10.69□□□□□ -0.7
SHMT2-201ENST00000328923 VRK2Q86Y07 508 aa10.69□□□□□ -0.7
SHMT2-201ENST00000328923 KMT5CQ86Y97 462 aa10.69□□□□□ -0.7
SHMT2-201ENST00000328923 OR6K2Q8NGY2 324 aa10.69□□□□□ -0.7
SHMT2-201ENST00000328923 MITD1Q8WV92 249 aa10.69□□□□□ -0.7
SHMT2-201ENST00000328923 SMPDL3AQ92484 453 aa10.69□□□□□ -0.7
SHMT2-201ENST00000328923 RNF126Q9BV68 326 aa10.69□□□□□ -0.7
SHMT2-201ENST00000328923 P2RX2Q9UBL9 471 aa10.69□□□□□ -0.7
SHMT2-201ENST00000328923 TBX21Q9UL17 535 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms