RNA–Protein interactions for RNA: ENST00000325243.6

CBX3P1-201, Transcript of chromobox 3 pseudogene 1, humanhuman

BASIC

Gene CBX3P1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P1-201ENST00000325243 RCC1P18754 421 aaPredicted RBP1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 CSNK2A2P19784 350 aaPredicted RBP1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 RFC3P40938 356 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 BTDP43251 543 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 VDAC2P45880 294 aaPredicted RBP1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 GPR1P46091 355 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 SERPINB8P50452 374 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 CCR8P51685 355 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 PLK1P53350 603 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 YWHAEP62258 255 aaKnown RBP1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 TNNC1P63316 161 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 SP4Q02446 784 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 ZNF92Q03936 586 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 ZNF33AQ06730 810 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 ARL6IP1Q15041 203 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 SF3A2Q15428 464 aaKnown RBP1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 ZNF726P1Q15940 193 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 HSP90AA4PQ58FG1 418 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 C1orf100Q5SVJ3 147 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 SPECC1LQ69YQ0 1117 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 PDPK2PQ6A1A2 396 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 ADNP2Q6IQ32 1131 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 CNIH2Q6PI25 160 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 SPESP1Q6UW49 350 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 ZNF620Q6ZNG0 422 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 RFLNAQ6ZTI6 216 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 COPS6Q7L5N1 327 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 ARCQ7LC44 396 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 ZNF571Q7Z3V5 609 aaPredicted RBP1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 FAM220AQ7Z4H9 259 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 CMC1Q7Z7K0 106 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 THOC6Q86W42 341 aaKnown RBP1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 PLA2G4DQ86XP0 818 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 RBM45Q8IUH3 476 aaKnown RBP1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 CBLN2Q8IUK8 224 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 ZNF547Q8IVP9 402 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 LRRC8AQ8IWT6 810 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 CD302Q8IX05 232 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 SELENOHQ8IZQ5 122 aaKnown RBP1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 MYOCDQ8IZQ8 938 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 ARHGAP18Q8N392 663 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 FAM71E2Q8N5Q1 922 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 GATSQ8NAP1 163 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 OR2AP1Q8NGE2 309 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 OR51F2Q8NH61 342 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 OR9G1Q8NH87 305 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 CXorf40AQ8TE69 158 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 NDRG1Q92597 394 aaKnown RBP1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 STMN2Q93045 179 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 TMEM54Q969K7 222 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 RPUSD4Q96CM3 377 aaKnown RBP1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 ZBED3Q96IU2 234 aaPredicted RBP1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 ACBD6Q9BR61 282 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 LZTS2Q9BRK4 669 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 MAP1LC3CQ9BXW4 147 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 FRMD8P1Q9BZ68 369 aaPredicted RBP1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 ZYG11BQ9C0D3 744 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 RAB1BQ9H0U4 201 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 CSNK1G1Q9HCP0 422 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 ZNF302Q9NR11 478 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 QPCTLQ9NXS2 382 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 CALYQ9NYX4 217 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 TREM2Q9NZC2 230 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 KCNIP1Q9NZI2 227 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 CCDC59Q9P031 241 aaKnown RBP1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 LGALS13Q9UHV8 139 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 ZNF225Q9UK10 706 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 FLVCR2Q9UPI3 526 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 NOSIPQ9Y314 301 aaKnown RBP1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 MSH6P52701 1360 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 THSD7BQ9C0I4 1608 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 CCDC180Q9P1Z9 1646 aa1.44□□□□□ -2.18
CBX3P1-201ENST00000325243 ADGRA3Q8IWK6 1321 aa1.43□□□□□ -2.18
CBX3P1-201ENST00000325243 AKNAQ7Z591 1439 aa1.43□□□□□ -2.18
CBX3P1-201ENST00000325243 TRAV6A0A075B6T7 132 aa1.43□□□□□ -2.18
CBX3P1-201ENST00000325243 GOLGA8QA0A0J9YX86 632 aa1.43□□□□□ -2.18
CBX3P1-201ENST00000325243 GSTTP1A0A1W2PQM5 241 aa1.43□□□□□ -2.18
CBX3P1-201ENST00000325243 A6NDX4 124 aa1.43□□□□□ -2.18
CBX3P1-201ENST00000325243 IQCF5A8MTL0 148 aa1.43□□□□□ -2.18
CBX3P1-201ENST00000325243 PDZK1P1A8MUH7 402 aa1.43□□□□□ -2.18
CBX3P1-201ENST00000325243 H0YHG0 523 aa1.43□□□□□ -2.18
CBX3P1-201ENST00000325243 TMX2-CTNND1H3BSU7 103 aa1.43□□□□□ -2.18
CBX3P1-201ENST00000325243 K7EN84 100 aa1.43□□□□□ -2.18
CBX3P1-201ENST00000325243 RFXANKO14593 260 aa1.43□□□□□ -2.18
CBX3P1-201ENST00000325243 ZNF780AO75290 641 aaPredicted RBP1.43□□□□□ -2.18
CBX3P1-201ENST00000325243 HSBP1O75506 76 aa1.43□□□□□ -2.18
CBX3P1-201ENST00000325243 EIF3GO75821 320 aaKnown RBP eCLIP1.43□□□□□ -2.18
CBX3P1-201ENST00000325243 SC5DO75845 299 aa1.43□□□□□ -2.18
CBX3P1-201ENST00000325243 TDP2O95551 362 aa1.43□□□□□ -2.18
CBX3P1-201ENST00000325243 INSP01308 110 aa1.43□□□□□ -2.18
CBX3P1-201ENST00000325243 HBE1P02100 147 aa1.43□□□□□ -2.18
CBX3P1-201ENST00000325243 CATP04040 527 aaKnown RBP1.43□□□□□ -2.18
CBX3P1-201ENST00000325243 DCNP07585 359 aaKnown RBP1.43□□□□□ -2.18
CBX3P1-201ENST00000325243 GABRG2P18507 467 aa1.43□□□□□ -2.18
CBX3P1-201ENST00000325243 TCN1P20061 433 aaPredicted RBP1.43□□□□□ -2.18
CBX3P1-201ENST00000325243 CCNOP22674 350 aa1.43□□□□□ -2.18
CBX3P1-201ENST00000325243 FOXN2P32314 431 aa1.43□□□□□ -2.18
CBX3P1-201ENST00000325243 SLC26A3P40879 764 aa1.43□□□□□ -2.18
CBX3P1-201ENST00000325243 TNFSF9P41273 254 aa1.43□□□□□ -2.18
CBX3P1-201ENST00000325243 KIR2DS4P43632 304 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms