RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 CLIC3O95833 236 aa8.96□□□□□ -0.98
COL12A1-201ENST00000322507 ALDOCP09972 364 aaKnown RBP8.96□□□□□ -0.98
COL12A1-201ENST00000322507 RUNX3Q13761 415 aa8.96□□□□□ -0.98
COL12A1-201ENST00000322507 ADAMTS17Q8TE56 1095 aa8.96□□□□□ -0.98
COL12A1-201ENST00000322507 STARD4Q96DR4 205 aa8.96□□□□□ -0.98
COL12A1-201ENST00000322507 F7P08709 466 aaPredicted RBP8.96□□□□□ -0.98
COL12A1-201ENST00000322507 CPOQ8IVL8 374 aa8.96□□□□□ -0.98
COL12A1-201ENST00000322507 LHX3Q9UBR4 397 aa8.96□□□□□ -0.98
COL12A1-201ENST00000322507 MAP1LC3B2A6NCE7 125 aa8.96□□□□□ -0.98
COL12A1-201ENST00000322507 PTHLHP12272 177 aa8.96□□□□□ -0.98
COL12A1-201ENST00000322507 TACR3P29371 465 aa8.96□□□□□ -0.98
COL12A1-201ENST00000322507 ADPRHP54922 357 aa8.96□□□□□ -0.98
COL12A1-201ENST00000322507 PNRC1Q12796 327 aaPredicted RBP8.96□□□□□ -0.98
COL12A1-201ENST00000322507 TUSC1Q2TAM9 212 aa8.96□□□□□ -0.98
COL12A1-201ENST00000322507 PHOSPHO2Q8TCD6 241 aa8.96□□□□□ -0.98
COL12A1-201ENST00000322507 ACTR3CQ9C0K3 210 aaPredicted RBP8.96□□□□□ -0.98
COL12A1-201ENST00000322507 MAP1LC3BQ9GZQ8 125 aa8.96□□□□□ -0.98
COL12A1-201ENST00000322507 INTS1Q8N201 2190 aaKnown RBP8.96□□□□□ -0.98
COL12A1-201ENST00000322507 GABRB3P28472 473 aa8.96□□□□□ -0.98
COL12A1-201ENST00000322507 HYAL2Q12891 473 aa8.96□□□□□ -0.98
COL12A1-201ENST00000322507 RBM24Q9BX46 236 aaKnown RBP8.96□□□□□ -0.98
COL12A1-201ENST00000322507 RNF39Q9H2S5 420 aa8.96□□□□□ -0.98
COL12A1-201ENST00000322507 PLEKHA2Q9HB19 425 aa8.96□□□□□ -0.98
COL12A1-201ENST00000322507 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.96□□□□□ -0.98
COL12A1-201ENST00000322507 FOCADQ5VW36 1801 aa8.96□□□□□ -0.98
COL12A1-201ENST00000322507 PHF3Q92576 2039 aaKnown RBP8.96□□□□□ -0.98
COL12A1-201ENST00000322507 PPP1R3DO95685 299 aa8.96□□□□□ -0.98
COL12A1-201ENST00000322507 SLC10A3P09131 477 aa8.96□□□□□ -0.98
COL12A1-201ENST00000322507 AESQ08117 197 aa8.96□□□□□ -0.98
COL12A1-201ENST00000322507 OR2B11Q5JQS5 317 aa8.96□□□□□ -0.98
COL12A1-201ENST00000322507 PLAC9Q5JTB6 97 aa8.96□□□□□ -0.98
COL12A1-201ENST00000322507 OR5AP2Q8NGF4 316 aa8.96□□□□□ -0.98
COL12A1-201ENST00000322507 GPR45Q9Y5Y3 372 aa8.96□□□□□ -0.98
COL12A1-201ENST00000322507 SLC25A17O43808 307 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 SLC35A1P78382 337 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 SSBP1Q04837 148 aaKnown RBP8.95□□□□□ -0.98
COL12A1-201ENST00000322507 KLRB1Q12918 225 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 KMT5CQ86Y97 462 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 ACOT4Q8N9L9 421 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 MYO16Q9Y6X6 1858 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 A0A1B0GW15 77 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 CTSAP10619 480 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 ZNF140P52738 457 aaPredicted RBP8.95□□□□□ -0.98
COL12A1-201ENST00000322507 SUCLG1P53597 346 aaKnown RBP8.95□□□□□ -0.98
COL12A1-201ENST00000322507 PDE7AQ13946 482 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 SLC35D3Q5M8T2 416 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 GSTO2Q9H4Y5 243 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 AHCTF1Q8WYP5 2266 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 CLDN1O95832 211 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 CR2P20023 1033 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 CD80P33681 288 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 IGSF8Q969P0 613 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 KCNJ15Q99712 375 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 CCDC187A0A096LP49 1063 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 ZCWPW2A0A1B0GU75 182 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 NDUFB7P17568 137 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 IL1RNP18510 177 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 C18orf63Q68DL7 685 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 OR10Q1Q8NGQ4 319 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 BCL2L2Q92843 193 aaPredicted RBP8.95□□□□□ -0.98
COL12A1-201ENST00000322507 DTD2Q96FN9 168 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 HHIPL1Q96JK4 782 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 SLC22A12Q96S37 553 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 OCEL1Q9H607 264 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 SPATA6Q9NWH7 488 aaPredicted RBP8.95□□□□□ -0.98
COL12A1-201ENST00000322507 CBLCQ9ULV8 474 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 SMIM30A4D0T7 59 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 TYMSP04818 313 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 TMEM251Q8N6I4 163 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 OR6C76A6NM76 312 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 C17orf105B2RV13 164 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 NOVA1P51513 510 aaKnown RBP8.95□□□□□ -0.98
COL12A1-201ENST00000322507 RPEL1Q2QD12 228 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 CPEB3Q8NE35 698 aaKnown RBP8.95□□□□□ -0.98
COL12A1-201ENST00000322507 SLC6A18Q96N87 628 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 SYT17Q9BSW7 474 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 ALOXE3Q9BYJ1 711 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 FKBP11Q9NYL4 201 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 SCG5P05408 212 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 FUT1P19526 365 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 RAC1P63000 192 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 CDONQ4KMG0 1287 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 FDX2Q6P4F2 183 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 AKR1E2Q96JD6 320 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 FAM210BQ96KR6 192 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 OR6C1Q96RD1 312 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 GPR174Q9BXC1 333 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 WDR61Q9GZS3 305 aaKnown RBP8.95□□□□□ -0.98
COL12A1-201ENST00000322507 IL17CQ9P0M4 197 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 OR52A4PA6NMU1 304 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 CPMP14384 443 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 ACSM3Q53FZ2 586 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 RNLSQ5VYX0 342 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 PSAPL1Q6NUJ1 521 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 SLC16A14Q7RTX9 510 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 OR11L1Q8NGX0 322 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 SNAI1O95863 264 aaPredicted RBP8.95□□□□□ -0.98
COL12A1-201ENST00000322507 ADH4P08319 380 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 TSPAN31Q12999 210 aa8.95□□□□□ -0.98
COL12A1-201ENST00000322507 PLK5Q496M5 336 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms