RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 BCO1Q9HAY6 547 aa8.47□□□□□ -1.05
CAPN3-201ENST00000318023 SLC5A10A0PJK1 596 aa8.47□□□□□ -1.05
CAPN3-201ENST00000318023 DAPL1A0PJW8 107 aa8.47□□□□□ -1.05
CAPN3-201ENST00000318023 PRSS47A8MTI9 375 aa8.47□□□□□ -1.05
CAPN3-201ENST00000318023 IDSB3KWA1 339 aa8.47□□□□□ -1.05
CAPN3-201ENST00000318023 OR2F2O95006 317 aa8.47□□□□□ -1.05
CAPN3-201ENST00000318023 F10P00742 488 aa8.47□□□□□ -1.05
CAPN3-201ENST00000318023 IFNA10P01566 189 aa8.47□□□□□ -1.05
CAPN3-201ENST00000318023 IGHA1P01876 353 aa8.47□□□□□ -1.05
CAPN3-201ENST00000318023 CD22P20273 847 aa8.47□□□□□ -1.05
CAPN3-201ENST00000318023 AOAHP28039 575 aa8.47□□□□□ -1.05
CAPN3-201ENST00000318023 MNDAP41218 407 aa8.47□□□□□ -1.05
CAPN3-201ENST00000318023 BIKQ13323 160 aa8.47□□□□□ -1.05
CAPN3-201ENST00000318023 OR2F1Q13607 317 aa8.47□□□□□ -1.05
CAPN3-201ENST00000318023 MAPK14Q16539 360 aa8.47□□□□□ -1.05
CAPN3-201ENST00000318023 MST1LQ2TV78 715 aa8.47□□□□□ -1.05
CAPN3-201ENST00000318023 LBHQ53QV2 105 aaPredicted RBP8.47□□□□□ -1.05
CAPN3-201ENST00000318023 ANXA8L1Q5VT79 327 aa8.47□□□□□ -1.05
CAPN3-201ENST00000318023 YOD1Q5VVQ6 348 aaPredicted RBP8.47□□□□□ -1.05
CAPN3-201ENST00000318023 CDCP2Q5VXM1 449 aa8.47□□□□□ -1.05
CAPN3-201ENST00000318023 C11orf87Q6NUJ2 197 aa8.47□□□□□ -1.05
CAPN3-201ENST00000318023 REEP3Q6NUK4 255 aa8.47□□□□□ -1.05
CAPN3-201ENST00000318023 SHISA6Q6ZSJ9 500 aa8.47□□□□□ -1.05
CAPN3-201ENST00000318023 SDR9C7Q8NEX9 313 aa8.47□□□□□ -1.05
CAPN3-201ENST00000318023 OR56A3Q8NH54 315 aa8.47□□□□□ -1.05
CAPN3-201ENST00000318023 SLC38A5Q8WUX1 472 aa8.47□□□□□ -1.05
CAPN3-201ENST00000318023 PPP1R1CQ8WVI7 109 aa8.47□□□□□ -1.05
CAPN3-201ENST00000318023 DVL3Q92997 716 aaPredicted RBP8.47□□□□□ -1.05
CAPN3-201ENST00000318023 RFKQ969G6 155 aa8.47□□□□□ -1.05
CAPN3-201ENST00000318023 TMEM19Q96HH6 336 aa8.47□□□□□ -1.05
CAPN3-201ENST00000318023 FAM46AQ96IP4 442 aaKnown RBP8.47□□□□□ -1.05
CAPN3-201ENST00000318023 SULT4A1Q9BR01 284 aa8.47□□□□□ -1.05
CAPN3-201ENST00000318023 FAM60AQ9NP50 221 aa8.47□□□□□ -1.05
CAPN3-201ENST00000318023 FGF21Q9NSA1 209 aa8.47□□□□□ -1.05
CAPN3-201ENST00000318023 CHRNA9Q9UGM1 479 aa8.47□□□□□ -1.05
CAPN3-201ENST00000318023 CACFD1Q9UGQ2 172 aa8.47□□□□□ -1.05
CAPN3-201ENST00000318023 A4GNTQ9UNA3 340 aa8.47□□□□□ -1.05
CAPN3-201ENST00000318023 MRPS18BQ9Y676 258 aaKnown RBP8.47□□□□□ -1.05
CAPN3-201ENST00000318023 TOX3O15405 576 aaPredicted RBP8.46□□□□□ -1.05
CAPN3-201ENST00000318023 DKK1O94907 266 aa8.46□□□□□ -1.05
CAPN3-201ENST00000318023 PPP1R3DO95685 299 aa8.46□□□□□ -1.05
CAPN3-201ENST00000318023 TMIGD3P0DMS9 266 aaPredicted RBP8.46□□□□□ -1.05
CAPN3-201ENST00000318023 CD79AP11912 226 aa8.46□□□□□ -1.05
CAPN3-201ENST00000318023 FABP4P15090 132 aa8.46□□□□□ -1.05
CAPN3-201ENST00000318023 GNALP38405 381 aa8.46□□□□□ -1.05
CAPN3-201ENST00000318023 GPR3P46089 330 aa8.46□□□□□ -1.05
CAPN3-201ENST00000318023 ZNF84P51523 738 aa8.46□□□□□ -1.05
CAPN3-201ENST00000318023 RAE1P78406 368 aaKnown RBP8.46□□□□□ -1.05
CAPN3-201ENST00000318023 AIMP2Q13155 320 aaKnown RBP8.46□□□□□ -1.05
CAPN3-201ENST00000318023 NDUFA9Q16795 377 aa8.46□□□□□ -1.05
CAPN3-201ENST00000318023 EXOSC6Q5RKV6 272 aaKnown RBP8.46□□□□□ -1.05
CAPN3-201ENST00000318023 AADACL4Q5VUY2 407 aa8.46□□□□□ -1.05
CAPN3-201ENST00000318023 ETFRF1Q6IPR1 90 aa8.46□□□□□ -1.05
CAPN3-201ENST00000318023 LRRC69Q6ZNQ3 347 aa8.46□□□□□ -1.05
CAPN3-201ENST00000318023 MMP21Q8N119 569 aa8.46□□□□□ -1.05
CAPN3-201ENST00000318023 ACBD7Q8N6N7 88 aa8.46□□□□□ -1.05
CAPN3-201ENST00000318023 KCNE4Q8WWG9 221 aa8.46□□□□□ -1.05
CAPN3-201ENST00000318023 GHSRQ92847 366 aa8.46□□□□□ -1.05
CAPN3-201ENST00000318023 C4orf36Q96KX1 117 aa8.46□□□□□ -1.05
CAPN3-201ENST00000318023 PLEKHA1Q9HB21 404 aa8.46□□□□□ -1.05
CAPN3-201ENST00000318023 COMMD9Q9P000 198 aa8.46□□□□□ -1.05
CAPN3-201ENST00000318023 ABRACLQ9P1F3 81 aa8.46□□□□□ -1.05
CAPN3-201ENST00000318023 RUVBL1Q9Y265 456 aaKnown RBP8.46□□□□□ -1.05
CAPN3-201ENST00000318023 KCNIP3Q9Y2W7 256 aa8.46□□□□□ -1.05
CAPN3-201ENST00000318023 GOLT1BQ9Y3E0 138 aa8.46□□□□□ -1.05
CAPN3-201ENST00000318023 NPFFR2Q9Y5X5 522 aa8.46□□□□□ -1.05
CAPN3-201ENST00000318023 RRP8O43159 456 aaKnown RBP8.46□□□□□ -1.06
CAPN3-201ENST00000318023 RAB3DO95716 219 aa8.46□□□□□ -1.06
CAPN3-201ENST00000318023 SLC16A8O95907 504 aa8.46□□□□□ -1.06
CAPN3-201ENST00000318023 PYCR1P32322 319 aa8.46□□□□□ -1.06
CAPN3-201ENST00000318023 OR12D2P58182 307 aa8.46□□□□□ -1.06
CAPN3-201ENST00000318023 RPS18P62269 152 aaKnown RBP8.46□□□□□ -1.06
CAPN3-201ENST00000318023 ZFP36L1Q07352 338 aaKnown RBP8.46□□□□□ -1.06
CAPN3-201ENST00000318023 KHDC3LQ587J8 217 aa8.46□□□□□ -1.06
CAPN3-201ENST00000318023 SLC35D3Q5M8T2 416 aa8.46□□□□□ -1.06
CAPN3-201ENST00000318023 THEM4Q5T1C6 240 aa8.46□□□□□ -1.06
CAPN3-201ENST00000318023 ACOT7LQ6ZUV0 252 aa8.46□□□□□ -1.06
CAPN3-201ENST00000318023 LINC01555Q8NAE3 123 aa8.46□□□□□ -1.06
CAPN3-201ENST00000318023 NAXEQ8NCW5 288 aa8.46□□□□□ -1.06
CAPN3-201ENST00000318023 OR5AP2Q8NGF4 316 aa8.46□□□□□ -1.06
CAPN3-201ENST00000318023 RNF141Q8WVD5 230 aa8.46□□□□□ -1.06
CAPN3-201ENST00000318023 POFUT1Q9H488 388 aa8.46□□□□□ -1.06
CAPN3-201ENST00000318023 SYNPO2LQ9H987 977 aa8.46□□□□□ -1.06
CAPN3-201ENST00000318023 HINT3Q9NQE9 182 aaKnown RBP8.46□□□□□ -1.06
CAPN3-201ENST00000318023 LANCL2Q9NS86 450 aa8.46□□□□□ -1.06
CAPN3-201ENST00000318023 MAN2C1Q9NTJ4 1040 aa8.46□□□□□ -1.06
CAPN3-201ENST00000318023 H2AFY2Q9P0M6 372 aaPredicted RBP8.46□□□□□ -1.06
CAPN3-201ENST00000318023 MMP24Q9Y5R2 645 aa8.46□□□□□ -1.06
CAPN3-201ENST00000318023 SVILO95425 2214 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 A6NNC1 897 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 TMEM150CB9EJG8 249 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 SOD3P08294 240 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 GALP22466 123 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 PRPH2P23942 346 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 CDK2P24941 298 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 CD200P41217 278 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 MAP3K8P41279 467 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 LYPLAL1Q5VWZ2 237 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 NPSR1Q6W5P4 371 aa8.45□□□□□ -1.06
CAPN3-201ENST00000318023 UBE2R2Q712K3 238 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms