RNA–Protein interactions for RNA: ENST00000317840.9

COL3A1-202, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL3A1, Length 3,873 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-202ENST00000317840 FADS1O60427 444 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 UBBP0CG47 229 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 UBCP0CG48 685 aaKnown RBP9.47□□□□□ -0.89
COL3A1-202ENST00000317840 CTLA4P16410 223 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 AVPR2P30518 371 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 RPS27AP62979 156 aaKnown RBP9.47□□□□□ -0.89
COL3A1-202ENST00000317840 UBA52P62987 128 aaKnown RBP9.47□□□□□ -0.89
COL3A1-202ENST00000317840 RIPPLY1Q0D2K3 151 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 DHRS2Q13268 280 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 ISXQ2M1V0 245 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 ZNF660Q6AZW8 331 aaPredicted RBP9.47□□□□□ -0.89
COL3A1-202ENST00000317840 DCXRQ7Z4W1 244 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 TRAPPC6BQ86SZ2 158 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 PLXDC1Q8IUK5 500 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 NUDCD2Q8WVJ2 157 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 CMBLQ96DG6 245 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 ZNF75AQ96N20 296 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 PHB2Q99623 299 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 PELOQ9BRX2 385 aaKnown RBP9.47□□□□□ -0.89
COL3A1-202ENST00000317840 TMPRSS13Q9BYE2 586 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 SELENOIQ9C0D9 397 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 TRBV5-5A0A0J9YX44 114 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 LOC107986453A0A1B0GWG9 222 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 RFPL4AA6NLU0 287 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 RFPL4AL1F8VTS6 287 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 PNPP00491 289 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 FBLP22087 321 aaKnown RBP9.47□□□□□ -0.89
COL3A1-202ENST00000317840 IL32P24001 234 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 SLC6A8P48029 635 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 RPL27P61353 136 aaKnown RBP9.47□□□□□ -0.89
COL3A1-202ENST00000317840 RPS4XP62701 263 aaKnown RBP9.47□□□□□ -0.89
COL3A1-202ENST00000317840 ZNF117Q03924 483 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 PMPCAQ10713 525 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 EMC4Q5J8M3 183 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 OR52W1Q6IF63 320 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 SEZ6L2Q6UXD5 910 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 FAM122BQ7Z309 247 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 ADGRE4PQ86SQ3 457 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 GTPBP8Q8N3Z3 284 aaPredicted RBP9.47□□□□□ -0.89
COL3A1-202ENST00000317840 TCTN2Q96GX1 697 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 SPACA5Q96QH8 159 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 GSKIPQ9P0R6 139 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 TPRP12270 2363 aaKnown RBP9.47□□□□□ -0.89
COL3A1-202ENST00000317840 TMED7-TICAM2A0A0A6YYA0 188 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 METTL12A8MUP2 240 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 TOR1AO14656 332 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 EGR4Q05215 589 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 AIMP2Q13155 320 aaKnown RBP9.47□□□□□ -0.89
COL3A1-202ENST00000317840 SKP2Q13309 424 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 ZNF169Q14929 603 aaPredicted RBP9.47□□□□□ -0.89
COL3A1-202ENST00000317840 DMRTC1Q5HYR2 192 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 LYSMD4Q5XG99 296 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 HAGHLQ6PII5 290 aaPredicted RBP9.47□□□□□ -0.89
COL3A1-202ENST00000317840 COX15Q7KZN9 410 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 NAXDQ8IW45 347 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 OR13C9Q8NGT0 318 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 GPR119Q8TDV5 335 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 ADAMTS18Q8TE60 1221 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 PAQR8Q8TEZ7 354 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 FGGYQ96C11 551 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 PRRT1Q99946 306 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 NUDT22Q9BRQ3 303 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 ZNF416Q9BWM5 594 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 TMED7Q9Y3B3 224 aa9.47□□□□□ -0.89
COL3A1-202ENST00000317840 NPIPB9F8W1W9 429 aa9.46□□□□□ -0.89
COL3A1-202ENST00000317840 SYT7O43581 403 aa9.46□□□□□ -0.89
COL3A1-202ENST00000317840 TMEM127O75204 238 aa9.46□□□□□ -0.89
COL3A1-202ENST00000317840 ZNF20P17024 532 aa9.46□□□□□ -0.89
COL3A1-202ENST00000317840 PPICP45877 212 aa9.46□□□□□ -0.89
COL3A1-202ENST00000317840 POU3F1Q03052 451 aaPredicted RBP9.46□□□□□ -0.89
COL3A1-202ENST00000317840 MFGE8Q08431 387 aaPredicted RBP9.46□□□□□ -0.89
COL3A1-202ENST00000317840 OR7A5Q15622 319 aa9.46□□□□□ -0.89
COL3A1-202ENST00000317840 TMEM88Q6PEY1 159 aa9.46□□□□□ -0.89
COL3A1-202ENST00000317840 DNM1P34Q6PK57 102 aa9.46□□□□□ -0.89
COL3A1-202ENST00000317840 CLEC1AQ8NC01 280 aa9.46□□□□□ -0.89
COL3A1-202ENST00000317840 SEH1LQ96EE3 360 aa9.46□□□□□ -0.89
COL3A1-202ENST00000317840 SLC46A1Q96NT5 459 aa9.46□□□□□ -0.89
COL3A1-202ENST00000317840 CDX2Q99626 313 aaPredicted RBP9.46□□□□□ -0.89
COL3A1-202ENST00000317840 FGF21Q9NSA1 209 aa9.46□□□□□ -0.89
COL3A1-202ENST00000317840 CUTCQ9NTM9 273 aa9.46□□□□□ -0.89
COL3A1-202ENST00000317840 LRP12Q9Y561 859 aa9.46□□□□□ -0.89
COL3A1-202ENST00000317840 NUP210Q8TEM1 1887 aaPredicted RBP9.46□□□□□ -0.89
COL3A1-202ENST00000317840 IGHV5-51A0A0C4DH38 117 aa9.46□□□□□ -0.9
COL3A1-202ENST00000317840 ASAH2BP0C7U1 165 aa9.46□□□□□ -0.9
COL3A1-202ENST00000317840 NAT1P18440 290 aa9.46□□□□□ -0.9
COL3A1-202ENST00000317840 CRABP1P29762 137 aa9.46□□□□□ -0.9
COL3A1-202ENST00000317840 RPL35P42766 123 aaKnown RBP9.46□□□□□ -0.9
COL3A1-202ENST00000317840 AFF3P51826 1226 aaKnown RBP9.46□□□□□ -0.9
COL3A1-202ENST00000317840 AWAT2Q6E213 333 aa9.46□□□□□ -0.9
COL3A1-202ENST00000317840 STK35Q8TDR2 534 aa9.46□□□□□ -0.9
COL3A1-202ENST00000317840 GPBAR1Q8TDU6 330 aa9.46□□□□□ -0.9
COL3A1-202ENST00000317840 DCUN1D4Q92564 292 aa9.46□□□□□ -0.9
COL3A1-202ENST00000317840 DAZLQ92904 295 aaKnown RBP9.46□□□□□ -0.9
COL3A1-202ENST00000317840 KLHDC3Q9BQ90 382 aa9.46□□□□□ -0.9
COL3A1-202ENST00000317840 METTL8Q9H825 291 aaKnown RBP9.46□□□□□ -0.9
COL3A1-202ENST00000317840 HPF1Q9NWY4 346 aa9.46□□□□□ -0.9
COL3A1-202ENST00000317840 STK17BO94768 372 aa9.46□□□□□ -0.9
COL3A1-202ENST00000317840 MGMTP16455 207 aa9.46□□□□□ -0.9
COL3A1-202ENST00000317840 UBE2IP63279 158 aaKnown RBP9.46□□□□□ -0.9
COL3A1-202ENST00000317840 FUT7Q11130 342 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms