RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 SLC6A1P30531 599 aa6.33□□□□□ -1.4
NPHP1-201ENST00000316534 CLDN20P56880 219 aa6.33□□□□□ -1.4
NPHP1-201ENST00000316534 ZNF121P58317 390 aaPredicted RBP6.33□□□□□ -1.4
NPHP1-201ENST00000316534 GRB2P62993 217 aaKnown RBP6.33□□□□□ -1.4
NPHP1-201ENST00000316534 SCN1BQ07699 218 aa6.33□□□□□ -1.4
NPHP1-201ENST00000316534 TNK1Q13470 666 aa6.33□□□□□ -1.4
NPHP1-201ENST00000316534 DYRK1AQ13627 763 aa6.33□□□□□ -1.4
NPHP1-201ENST00000316534 KCNJ8Q15842 424 aa6.33□□□□□ -1.4
NPHP1-201ENST00000316534 OLFML2AQ68BL7 652 aa6.33□□□□□ -1.4
NPHP1-201ENST00000316534 TMEM225Q6GV28 225 aa6.33□□□□□ -1.4
NPHP1-201ENST00000316534 POMZP3Q6PJE2 187 aa6.33□□□□□ -1.4
NPHP1-201ENST00000316534 SULF2Q8IWU5 870 aa6.33□□□□□ -1.4
NPHP1-201ENST00000316534 KDM8Q8N371 416 aa6.33□□□□□ -1.4
NPHP1-201ENST00000316534 SMIM4Q8WVI0 70 aa6.33□□□□□ -1.4
NPHP1-201ENST00000316534 DIRAS2Q96HU8 199 aa6.33□□□□□ -1.4
NPHP1-201ENST00000316534 TTTY12Q9BZ98 90 aa6.33□□□□□ -1.4
NPHP1-201ENST00000316534 PAQR5Q9NXK6 330 aaPredicted RBP6.33□□□□□ -1.4
NPHP1-201ENST00000316534 ZNF107Q9UII5 783 aaPredicted RBP6.33□□□□□ -1.4
NPHP1-201ENST00000316534 SPENQ96T58 3664 aaKnown RBP6.33□□□□□ -1.4
NPHP1-201ENST00000316534 A0A1B0GTH9 108 aa6.33□□□□□ -1.4
NPHP1-201ENST00000316534 FOXI3A8MTJ6 420 aaPredicted RBP6.33□□□□□ -1.4
NPHP1-201ENST00000316534 WDPCPO95876 746 aa6.33□□□□□ -1.4
NPHP1-201ENST00000316534 HLA-DMAP28067 261 aa6.33□□□□□ -1.4
NPHP1-201ENST00000316534 TRIM16LQ309B1 348 aa6.33□□□□□ -1.4
NPHP1-201ENST00000316534 TMEM244Q5VVB8 128 aa6.33□□□□□ -1.4
NPHP1-201ENST00000316534 FAM131AQ6UXB0 335 aa6.33□□□□□ -1.4
NPHP1-201ENST00000316534 ZNF100Q8IYN0 542 aa6.33□□□□□ -1.4
NPHP1-201ENST00000316534 ZNF385AQ96PM9 386 aaKnown RBP6.33□□□□□ -1.4
NPHP1-201ENST00000316534 C11orf54Q9H0W9 315 aaPredicted RBP6.33□□□□□ -1.4
NPHP1-201ENST00000316534 RBFOX1Q9NWB1 397 aaKnown RBP6.33□□□□□ -1.4
NPHP1-201ENST00000316534 ZNF224Q9NZL3 707 aa6.33□□□□□ -1.4
NPHP1-201ENST00000316534 LRFN1Q9P244 771 aa6.33□□□□□ -1.4
NPHP1-201ENST00000316534 FBXL3Q9UKT7 428 aa6.33□□□□□ -1.4
NPHP1-201ENST00000316534 OR5H15A6NDH6 313 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 TNFSF11O14788 317 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 SYNGR3O43761 229 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 MELTFP08582 738 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 ACSM4P0C7M7 580 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 ZNF43P17038 809 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 ENPP1P22413 925 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 MPZP25189 248 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 CAPZA1P52907 286 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 CLRN1P58418 232 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 DEFA1P59665 94 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 DEFA3P59666 94 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 PITPNAQ00169 270 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 IGFL3Q6UXB1 125 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 FAM109AQ8N4B1 249 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 NKAIN3Q8N8D7 197 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 THEM6Q8WUY1 208 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 ZNF552Q9H707 407 aaPredicted RBP6.32□□□□□ -1.4
NPHP1-201ENST00000316534 RHBDL2Q9NX52 303 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 WASF3Q9UPY6 502 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 A0A0G2JMP0 313 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 A0A0X1KG70 313 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 SSX4O60224 188 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 MMP7P09237 267 aaPredicted RBP6.32□□□□□ -1.4
NPHP1-201ENST00000316534 QDPRP09417 244 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 HSD11B1P28845 292 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 KIR2DL3P43628 341 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 GSK3AP49840 483 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 BTG1P62324 171 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 OR1C1Q15619 314 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 ELFN2Q5R3F8 820 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 IDNKQ5T6J7 187 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 ANKRD16Q6P6B7 361 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 COLCA1Q6ZS62 124 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 UTS2BQ765I0 119 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 CMTM4Q8IZR5 234 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 OR4M2Q8NGB6 313 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 C15orf40Q8WUR7 153 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 CEP19Q96LK0 163 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 C1orf147Q96MC9 270 aaPredicted RBP6.32□□□□□ -1.4
NPHP1-201ENST00000316534 UQCC2Q9BRT2 126 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 PRDM14Q9GZV8 571 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 SLC22A4Q9H015 551 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 TPK1Q9H3S4 243 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 ABCB10Q9NRK6 738 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 DLL3Q9NYJ7 618 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 STMN3Q9NZ72 180 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 COMMD3Q9UBI1 195 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 BSNQ9UPA5 3926 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 MSR1P21757 451 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 ANOS1P23352 680 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 GABREP78334 506 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 ZNF544Q6NX49 715 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 CCBE1Q6UXH8 406 aaPredicted RBP6.32□□□□□ -1.4
NPHP1-201ENST00000316534 TCTE3Q8IZS6 198 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 GHDCQ8N2G8 530 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 LGALS14Q8TCE9 139 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 SPSB4Q96A44 273 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 PNPLA2Q96AD5 504 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 FOXRED1Q96CU9 486 aaPredicted RBP6.32□□□□□ -1.4
NPHP1-201ENST00000316534 SMAD5Q99717 465 aaKnown RBP6.32□□□□□ -1.4
NPHP1-201ENST00000316534 EMC6Q9BV81 110 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 PBOV1Q9GZY1 135 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 TMEM38BQ9NVV0 291 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 EXTL2Q9UBQ6 330 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 TEKT2Q9UIF3 430 aa6.32□□□□□ -1.4
NPHP1-201ENST00000316534 KLF13Q9Y2Y9 288 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms