RNA–Protein interactions for RNA: ENST00000311487.9

HMGA1-201, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-201ENST00000311487 FAM27BQ5VT28 67 aa15.85■□□□□ 0.13
HMGA1-201ENST00000311487 RNFT2Q96EX2 444 aa15.85■□□□□ 0.13
HMGA1-201ENST00000311487 CDCA4Q9BXL8 241 aa15.85■□□□□ 0.13
HMGA1-201ENST00000311487 HDHD5Q9BXW7 423 aa15.85■□□□□ 0.13
HMGA1-201ENST00000311487 KCNG2Q9UJ96 466 aa15.85■□□□□ 0.13
HMGA1-201ENST00000311487 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.85■□□□□ 0.13
HMGA1-201ENST00000311487 MAGEB4O15481 346 aaPredicted RBP15.84■□□□□ 0.13
HMGA1-201ENST00000311487 NPR2P20594 1047 aa15.84■□□□□ 0.13
HMGA1-201ENST00000311487 HTR1FP30939 366 aa15.84■□□□□ 0.13
HMGA1-201ENST00000311487 LIPAP38571 399 aa15.84■□□□□ 0.13
HMGA1-201ENST00000311487 RAB1AP62820 205 aa15.84■□□□□ 0.13
HMGA1-201ENST00000311487 TIGD4Q8IY51 512 aa15.84■□□□□ 0.13
HMGA1-201ENST00000311487 STEAP2Q8NFT2 490 aa15.84■□□□□ 0.13
HMGA1-201ENST00000311487 TBC1D15Q8TC07 691 aa15.84■□□□□ 0.13
HMGA1-201ENST00000311487 SLC7A6Q92536 515 aa15.84■□□□□ 0.13
HMGA1-201ENST00000311487 INTS14Q96SY0 518 aa15.84■□□□□ 0.13
HMGA1-201ENST00000311487 ADGRL4Q9HBW9 690 aa15.84■□□□□ 0.13
HMGA1-201ENST00000311487 NPAP1Q9NZP6 1156 aa15.84■□□□□ 0.13
HMGA1-201ENST00000311487 MOKQ9UQ07 419 aa15.84■□□□□ 0.13
HMGA1-201ENST00000311487 KLHDC2Q9Y2U9 406 aa15.84■□□□□ 0.13
HMGA1-201ENST00000311487 CLEC18AA5D8T8 446 aa15.84■□□□□ 0.13
HMGA1-201ENST00000311487 CD36P16671 472 aa15.84■□□□□ 0.13
HMGA1-201ENST00000311487 MTNR1AP48039 350 aa15.84■□□□□ 0.13
HMGA1-201ENST00000311487 ZNF91Q05481 1191 aa15.84■□□□□ 0.13
HMGA1-201ENST00000311487 PPA1Q15181 289 aa15.84■□□□□ 0.13
HMGA1-201ENST00000311487 TIGD6Q17RP2 521 aa15.84■□□□□ 0.13
HMGA1-201ENST00000311487 SLC25A30Q5SVS4 291 aa15.84■□□□□ 0.13
HMGA1-201ENST00000311487 ZNF774Q6NX45 483 aa15.84■□□□□ 0.13
HMGA1-201ENST00000311487 CLEC18BQ6UXF7 455 aa15.84■□□□□ 0.13
HMGA1-201ENST00000311487 CFAP77Q6ZQR2 320 aa15.84■□□□□ 0.13
HMGA1-201ENST00000311487 FOXL2NBQ6ZUU3 175 aa15.84■□□□□ 0.13
HMGA1-201ENST00000311487 GID4Q8IVV7 300 aa15.84■□□□□ 0.13
HMGA1-201ENST00000311487 CLEC18CQ8NCF0 446 aa15.84■□□□□ 0.13
HMGA1-201ENST00000311487 LRRC46Q96FV0 321 aa15.84■□□□□ 0.13
HMGA1-201ENST00000311487 AMELYQ99218 206 aa15.84■□□□□ 0.13
HMGA1-201ENST00000311487 CRIM1Q9NZV1 1036 aa15.84■□□□□ 0.13
HMGA1-201ENST00000311487 SLC25A15Q9Y619 301 aa15.84■□□□□ 0.13
HMGA1-201ENST00000311487 ANKHD1Q8IWZ3 2542 aaKnown RBP15.84■□□□□ 0.13
HMGA1-201ENST00000311487 SLC22A31A6NKX4 558 aa15.83■□□□□ 0.12
HMGA1-201ENST00000311487 DBTP11182 482 aaKnown RBP15.83■□□□□ 0.12
HMGA1-201ENST00000311487 PSG4Q00888 419 aa15.83■□□□□ 0.12
HMGA1-201ENST00000311487 GSG1Q2KHT4 349 aa15.83■□□□□ 0.12
HMGA1-201ENST00000311487 HIST2H2BCQ6DN03 193 aa15.83■□□□□ 0.12
HMGA1-201ENST00000311487 ZNF627Q7L945 461 aa15.83■□□□□ 0.12
HMGA1-201ENST00000311487 DCXRQ7Z4W1 244 aa15.83■□□□□ 0.12
HMGA1-201ENST00000311487 THEM6Q8WUY1 208 aa15.83■□□□□ 0.12
HMGA1-201ENST00000311487 MUCL1Q96DR8 90 aa15.83■□□□□ 0.12
HMGA1-201ENST00000311487 COPS3Q9UNS2 423 aa15.83■□□□□ 0.12
HMGA1-201ENST00000311487 M0R1B8 84 aa15.82■□□□□ 0.12
HMGA1-201ENST00000311487 SLC22A1O15245 554 aa15.82■□□□□ 0.12
HMGA1-201ENST00000311487 ENTPD1P49961 510 aa15.82■□□□□ 0.12
HMGA1-201ENST00000311487 IDH3GP51553 393 aaPredicted RBP15.82■□□□□ 0.12
HMGA1-201ENST00000311487 EIF2B1Q14232 305 aaKnown RBP15.82■□□□□ 0.12
HMGA1-201ENST00000311487 PABPC1L2AQ5JQF8 200 aa15.82■□□□□ 0.12
HMGA1-201ENST00000311487 SLC35D3Q5M8T2 416 aa15.82■□□□□ 0.12
HMGA1-201ENST00000311487 TIMM23BQ5SRD1 257 aa15.82■□□□□ 0.12
HMGA1-201ENST00000311487 MEDAGQ5VYS4 303 aa15.82■□□□□ 0.12
HMGA1-201ENST00000311487 CPEB3Q8NE35 698 aaKnown RBP15.82■□□□□ 0.12
HMGA1-201ENST00000311487 RFKQ969G6 155 aa15.82■□□□□ 0.12
HMGA1-201ENST00000311487 LGALS12Q96DT0 336 aa15.82■□□□□ 0.12
HMGA1-201ENST00000311487 MAP6Q96JE9 813 aa15.82■□□□□ 0.12
HMGA1-201ENST00000311487 KCNN2Q9H2S1 579 aa15.82■□□□□ 0.12
HMGA1-201ENST00000311487 B3GNT2Q9NY97 397 aa15.82■□□□□ 0.12
HMGA1-201ENST00000311487 CYB5R1Q9UHQ9 305 aa15.82■□□□□ 0.12
HMGA1-201ENST00000311487 RPL36Q9Y3U8 105 aaKnown RBP15.82■□□□□ 0.12
HMGA1-201ENST00000311487 CADP27708 2225 aa15.82■□□□□ 0.12
HMGA1-201ENST00000311487 PKDREJQ9NTG1 2253 aa15.82■□□□□ 0.12
HMGA1-201ENST00000311487 MMP7P09237 267 aaPredicted RBP15.82■□□□□ 0.12
HMGA1-201ENST00000311487 CCNOP22674 350 aa15.82■□□□□ 0.12
HMGA1-201ENST00000311487 APEX1P27695 318 aaKnown RBP15.82■□□□□ 0.12
HMGA1-201ENST00000311487 VBP1P61758 197 aa15.82■□□□□ 0.12
HMGA1-201ENST00000311487 LSM3P62310 102 aaKnown RBP15.82■□□□□ 0.12
HMGA1-201ENST00000311487 SLC36A2Q495M3 483 aa15.82■□□□□ 0.12
HMGA1-201ENST00000311487 SLC18B1Q6NT16 456 aa15.82■□□□□ 0.12
HMGA1-201ENST00000311487 ZNF367Q7RTV3 350 aa15.82■□□□□ 0.12
HMGA1-201ENST00000311487 C1orf162Q8NEQ5 155 aaPredicted RBP15.82■□□□□ 0.12
HMGA1-201ENST00000311487 OR10H4Q8NGA5 316 aa15.82■□□□□ 0.12
HMGA1-201ENST00000311487 OR2AJ1Q8NGZ0 328 aa15.82■□□□□ 0.12
HMGA1-201ENST00000311487 RPL3LQ92901 407 aaKnown RBP15.82■□□□□ 0.12
HMGA1-201ENST00000311487 CNN2Q99439 309 aaKnown RBP15.82■□□□□ 0.12
HMGA1-201ENST00000311487 CHCHD3Q9NX63 227 aaKnown RBP15.82■□□□□ 0.12
HMGA1-201ENST00000311487 GDF2Q9UK05 429 aaPredicted RBP15.82■□□□□ 0.12
HMGA1-201ENST00000311487 CST2P09228 141 aa15.81■□□□□ 0.12
HMGA1-201ENST00000311487 LCN1P1Q5VSP4 162 aa15.81■□□□□ 0.12
HMGA1-201ENST00000311487 SSX6Q7RTT6 188 aa15.81■□□□□ 0.12
HMGA1-201ENST00000311487 ZNF584Q8IVC4 421 aa15.81■□□□□ 0.12
HMGA1-201ENST00000311487 NDNFQ8TB73 568 aa15.81■□□□□ 0.12
HMGA1-201ENST00000311487 HSD17B8Q92506 261 aa15.81■□□□□ 0.12
HMGA1-201ENST00000311487 OR2H1Q9GZK4 316 aa15.81■□□□□ 0.12
HMGA1-201ENST00000311487 WNT5BQ9H1J7 359 aa15.81■□□□□ 0.12
HMGA1-201ENST00000311487 CENPMQ9NSP4 180 aa15.81■□□□□ 0.12
HMGA1-201ENST00000311487 NDRG3Q9UGV2 375 aa15.81■□□□□ 0.12
HMGA1-201ENST00000311487 LRBAP50851 2863 aa15.81■□□□□ 0.12
HMGA1-201ENST00000311487 NBPF19A0A087WUL8 3843 aa15.81■□□□□ 0.12
HMGA1-201ENST00000311487 C12orf71A8MTZ7 269 aa15.8■□□□□ 0.12
HMGA1-201ENST00000311487 PRR32B1ATL7 298 aa15.8■□□□□ 0.12
HMGA1-201ENST00000311487 DBHP09172 617 aa15.8■□□□□ 0.12
HMGA1-201ENST00000311487 SBK2P0C263 348 aa15.8■□□□□ 0.12
HMGA1-201ENST00000311487 KIR2DL3P43628 341 aa15.8■□□□□ 0.12
HMGA1-201ENST00000311487 NCS1P62166 190 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms