RNA–Protein interactions for RNA: ENST00000307662.4

SYNPO-201, Transcript of synaptopodin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNPO, Length 5,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-201ENST00000307662 NR0B2Q15466 257 aa15.83■□□□□ 0.12
SYNPO-201ENST00000307662 IL34Q6ZMJ4 242 aa15.83■□□□□ 0.12
SYNPO-201ENST00000307662 CALHM3Q86XJ0 350 aa15.83■□□□□ 0.12
SYNPO-201ENST00000307662 ZNF485Q8NCK3 441 aa15.83■□□□□ 0.12
SYNPO-201ENST00000307662 LIPHQ8WWY8 451 aa15.83■□□□□ 0.12
SYNPO-201ENST00000307662 INTS12Q96CB8 462 aaKnown RBP15.83■□□□□ 0.12
SYNPO-201ENST00000307662 TM7SF3Q9NS93 570 aa15.83■□□□□ 0.12
SYNPO-201ENST00000307662 KLK11Q9UBX7 282 aa15.83■□□□□ 0.12
SYNPO-201ENST00000307662 ANKRD36CQ5JPF3 1778 aa15.83■□□□□ 0.12
SYNPO-201ENST00000307662 PRPH2P23942 346 aa15.83■□□□□ 0.12
SYNPO-201ENST00000307662 ADIPOR2Q86V24 386 aa15.83■□□□□ 0.12
SYNPO-201ENST00000307662 VPS25Q9BRG1 176 aa15.83■□□□□ 0.12
SYNPO-201ENST00000307662 OR51I2Q9H344 312 aa15.83■□□□□ 0.12
SYNPO-201ENST00000307662 SEMA6CQ9H3T2 930 aa15.83■□□□□ 0.12
SYNPO-201ENST00000307662 BOKQ9UMX3 212 aaPredicted RBP15.83■□□□□ 0.12
SYNPO-201ENST00000307662 CALCRP30988 508 aa15.82■□□□□ 0.12
SYNPO-201ENST00000307662 S100A7P31151 101 aa15.82■□□□□ 0.12
SYNPO-201ENST00000307662 HRH1P35367 487 aa15.82■□□□□ 0.12
SYNPO-201ENST00000307662 ENDOGQ14249 297 aaKnown RBP15.82■□□□□ 0.12
SYNPO-201ENST00000307662 OR2T2Q6IF00 324 aa15.82■□□□□ 0.12
SYNPO-201ENST00000307662 MOB1AQ9H8S9 216 aa15.82■□□□□ 0.12
SYNPO-201ENST00000307662 DNMT3BQ9UBC3 853 aaKnown RBP15.82■□□□□ 0.12
SYNPO-201ENST00000307662 TMPRSS11DO60235 418 aa15.82■□□□□ 0.12
SYNPO-201ENST00000307662 AQP8O94778 261 aa15.82■□□□□ 0.12
SYNPO-201ENST00000307662 EIF1P41567 113 aaKnown RBP15.82■□□□□ 0.12
SYNPO-201ENST00000307662 ZNF92Q03936 586 aa15.82■□□□□ 0.12
SYNPO-201ENST00000307662 C4orf17Q53FE4 359 aa15.82■□□□□ 0.12
SYNPO-201ENST00000307662 ADGRG3Q86Y34 549 aa15.82■□□□□ 0.12
SYNPO-201ENST00000307662 SLC38A9Q8NBW4 561 aa15.82■□□□□ 0.12
SYNPO-201ENST00000307662 CSF3RQ99062 836 aa15.82■□□□□ 0.12
SYNPO-201ENST00000307662 RNF150Q9ULK6 438 aa15.82■□□□□ 0.12
SYNPO-201ENST00000307662 V9GYS6 101 aa15.82■□□□□ 0.12
SYNPO-201ENST00000307662 NQO2P16083 231 aa15.82■□□□□ 0.12
SYNPO-201ENST00000307662 NAT1P18440 290 aa15.82■□□□□ 0.12
SYNPO-201ENST00000307662 LCN15Q6UWW0 184 aa15.82■□□□□ 0.12
SYNPO-201ENST00000307662 SLC16A12Q6ZSM3 486 aa15.82■□□□□ 0.12
SYNPO-201ENST00000307662 WFDC5Q8TCV5 224 aa15.82■□□□□ 0.12
SYNPO-201ENST00000307662 NUDCD2Q8WVJ2 157 aa15.82■□□□□ 0.12
SYNPO-201ENST00000307662 KIR3DX1Q9H7L2 352 aa15.82■□□□□ 0.12
SYNPO-201ENST00000307662 TRAV20A0A0B4J274 112 aa15.82■□□□□ 0.12
SYNPO-201ENST00000307662 ABHD16AO95870 558 aa15.82■□□□□ 0.12
SYNPO-201ENST00000307662 F10P00742 488 aa15.82■□□□□ 0.12
SYNPO-201ENST00000307662 CD63P08962 238 aa15.82■□□□□ 0.12
SYNPO-201ENST00000307662 PRAMEF20Q5VT98 475 aa15.82■□□□□ 0.12
SYNPO-201ENST00000307662 METRNLQ641Q3 311 aa15.82■□□□□ 0.12
SYNPO-201ENST00000307662 OR51E1Q8TCB6 317 aa15.82■□□□□ 0.12
SYNPO-201ENST00000307662 STT3BQ8TCJ2 826 aa15.82■□□□□ 0.12
SYNPO-201ENST00000307662 PDFQ9HBH1 243 aa15.82■□□□□ 0.12
SYNPO-201ENST00000307662 LRP5O75197 1615 aa15.82■□□□□ 0.12
SYNPO-201ENST00000307662 A0A1B0GTL3 188 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 ARG2P78540 354 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 BPIFCQ8NFQ6 507 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 OR10J5Q8NHC4 309 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 MARCH1Q8TCQ1 289 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 ZDHHC5Q9C0B5 715 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 DAPP1Q9UN19 280 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 NOSIPQ9Y314 301 aaKnown RBP15.81■□□□□ 0.12
SYNPO-201ENST00000307662 CTXN2P0C2S0 81 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 CSF2RBP32927 897 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 ZNF90Q03938 601 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 GPNMBQ14956 572 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 C12orf73Q69YU5 71 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 PPP1R3BQ86XI6 285 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 OR8D4Q8NGM9 314 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 OR13D1Q8NGV5 346 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 OR51H1Q8NH63 302 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 NXPH2O95156 264 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 TNFRSF4P43489 277 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 CASP6P55212 293 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 HSD17B7P56937 341 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 C11orf87Q6NUJ2 197 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 KCNJ15Q99712 375 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 JAM3Q9BX67 310 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 PPP1R14DQ9NXH3 145 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 ZNF346Q9UL40 294 aaKnown RBP15.81■□□□□ 0.12
SYNPO-201ENST00000307662 ITGB4P16144 1822 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 MEIKINA0A087WXM9 373 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 SFTA3P0C7M3 94 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 CT45A6P0DMU7 189 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 CT45A5P0DMU8 189 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 CT45A7P0DMV0 189 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 CT45A8P0DMV1 189 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 CT45A9P0DMV2 189 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 GJA4P35212 333 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 EMP3P54852 163 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 CT45A2Q5DJT8 189 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 CT45A1Q5HYN5 189 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 PLXDC2Q6UX71 529 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 EXD3Q8N9H8 876 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 OR4F5Q8NH21 305 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 CT45A3Q8NHU0 189 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 RXFP4Q8TDU9 374 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 OR4F4Q96R69 305 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 FAM234AQ9H0X4 552 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 ZNF586Q9NXT0 402 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 MTCH1Q9NZJ7 389 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 CCL26Q9Y258 94 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 SDCBPO00560 298 aaPredicted RBP15.81■□□□□ 0.12
SYNPO-201ENST00000307662 ANGPTL7O43827 346 aa15.81■□□□□ 0.12
SYNPO-201ENST00000307662 TFAP2EQ6VUC0 442 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms