RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 APOBEC1P41238 236 aaKnown RBP11.71□□□□□ -0.54
COL3A1-201ENST00000304636 RPL18Q07020 188 aaKnown RBP11.71□□□□□ -0.54
COL3A1-201ENST00000304636 SLC17A1Q14916 467 aa11.71□□□□□ -0.54
COL3A1-201ENST00000304636 ACKR1Q16570 336 aa11.71□□□□□ -0.54
COL3A1-201ENST00000304636 GSG1Q2KHT4 349 aa11.71□□□□□ -0.54
COL3A1-201ENST00000304636 ADIPOR2Q86V24 386 aa11.71□□□□□ -0.54
COL3A1-201ENST00000304636 DND1Q8IYX4 353 aaKnown RBP11.71□□□□□ -0.54
COL3A1-201ENST00000304636 OR5M1Q8NGP8 315 aa11.71□□□□□ -0.54
COL3A1-201ENST00000304636 TOX2Q96NM4 488 aa11.71□□□□□ -0.54
COL3A1-201ENST00000304636 OR51B6Q9H340 312 aa11.71□□□□□ -0.54
COL3A1-201ENST00000304636 PLK3Q9H4B4 646 aa11.71□□□□□ -0.54
COL3A1-201ENST00000304636 MBNL1Q9NR56 388 aaKnown RBP11.71□□□□□ -0.54
COL3A1-201ENST00000304636 PRAMEF4O60810 478 aa11.7□□□□□ -0.54
COL3A1-201ENST00000304636 CD37P11049 281 aa11.7□□□□□ -0.54
COL3A1-201ENST00000304636 RAE1P78406 368 aaKnown RBP11.7□□□□□ -0.54
COL3A1-201ENST00000304636 B4GALNT1Q00973 533 aa11.7□□□□□ -0.54
COL3A1-201ENST00000304636 TMEM71Q6P5X7 295 aa11.7□□□□□ -0.54
COL3A1-201ENST00000304636 SKA3Q8IX90 412 aa11.7□□□□□ -0.54
COL3A1-201ENST00000304636 EDAQ92838 391 aa11.7□□□□□ -0.54
COL3A1-201ENST00000304636 ARV1Q9H2C2 271 aa11.7□□□□□ -0.54
COL3A1-201ENST00000304636 EXOGQ9Y2C4 368 aaKnown RBP11.7□□□□□ -0.54
COL3A1-201ENST00000304636 C20orf202A1L168 122 aa11.7□□□□□ -0.54
COL3A1-201ENST00000304636 CA3P07451 260 aa11.7□□□□□ -0.54
COL3A1-201ENST00000304636 CD63P08962 238 aa11.7□□□□□ -0.54
COL3A1-201ENST00000304636 EPHA4P54764 986 aa11.7□□□□□ -0.54
COL3A1-201ENST00000304636 HLXQ14774 488 aaPredicted RBP11.7□□□□□ -0.54
COL3A1-201ENST00000304636 CD300LDQ6UXZ3 194 aa11.7□□□□□ -0.54
COL3A1-201ENST00000304636 C15orf54Q8N8G6 183 aa11.7□□□□□ -0.54
COL3A1-201ENST00000304636 ZNF485Q8NCK3 441 aa11.7□□□□□ -0.54
COL3A1-201ENST00000304636 OR2G2Q8NGZ5 317 aa11.7□□□□□ -0.54
COL3A1-201ENST00000304636 ZFPM2Q8WW38 1151 aa11.7□□□□□ -0.54
COL3A1-201ENST00000304636 SLAMF6Q96DU3 332 aa11.7□□□□□ -0.54
COL3A1-201ENST00000304636 R4GMQ9 66 aa11.7□□□□□ -0.54
COL3A1-201ENST00000304636 KCNE1BA0A087WTH5 132 aa11.7□□□□□ -0.54
COL3A1-201ENST00000304636 SCAF4O95104 1147 aaKnown RBP11.7□□□□□ -0.54
COL3A1-201ENST00000304636 WNT1P04628 370 aa11.7□□□□□ -0.54
COL3A1-201ENST00000304636 IL10RAQ13651 578 aa11.7□□□□□ -0.54
COL3A1-201ENST00000304636 HPSE2Q8WWQ2 592 aa11.7□□□□□ -0.54
COL3A1-201ENST00000304636 S1PR5Q9H228 398 aa11.7□□□□□ -0.54
COL3A1-201ENST00000304636 PLEKHB1Q9UF11 243 aaPredicted RBP11.7□□□□□ -0.54
COL3A1-201ENST00000304636 KCND3Q9UK17 655 aa11.7□□□□□ -0.54
COL3A1-201ENST00000304636 ZNF587BE7ETH6 402 aa11.7□□□□□ -0.54
COL3A1-201ENST00000304636 TUSC2O75896 110 aa11.7□□□□□ -0.54
COL3A1-201ENST00000304636 ATF1P18846 271 aa11.7□□□□□ -0.54
COL3A1-201ENST00000304636 NR0B2Q15466 257 aa11.7□□□□□ -0.54
COL3A1-201ENST00000304636 DMBX1Q8NFW5 382 aa11.7□□□□□ -0.54
COL3A1-201ENST00000304636 OR51E1Q8TCB6 317 aa11.7□□□□□ -0.54
COL3A1-201ENST00000304636 NUDCD2Q8WVJ2 157 aa11.7□□□□□ -0.54
COL3A1-201ENST00000304636 CNRIP1Q96F85 164 aaPredicted RBP11.7□□□□□ -0.54
COL3A1-201ENST00000304636 KCNIP2Q9NS61 270 aa11.7□□□□□ -0.54
COL3A1-201ENST00000304636 WSB2Q9NYS7 404 aaPredicted RBP11.7□□□□□ -0.54
COL3A1-201ENST00000304636 A0A0A6YYD5 115 aa11.7□□□□□ -0.54
COL3A1-201ENST00000304636 HSPB6O14558 160 aa11.7□□□□□ -0.54
COL3A1-201ENST00000304636 TXNDC12O95881 172 aa11.7□□□□□ -0.54
COL3A1-201ENST00000304636 TMEM31Q5JXX7 168 aa11.7□□□□□ -0.54
COL3A1-201ENST00000304636 SEMA6DQ8NFY4 1073 aa11.7□□□□□ -0.54
COL3A1-201ENST00000304636 MARCH1Q8TCQ1 289 aa11.7□□□□□ -0.54
COL3A1-201ENST00000304636 OR1E3Q8WZA6 343 aa11.7□□□□□ -0.54
COL3A1-201ENST00000304636 LAT2Q9GZY6 243 aa11.7□□□□□ -0.54
COL3A1-201ENST00000304636 RHOFQ9HBH0 211 aa11.7□□□□□ -0.54
COL3A1-201ENST00000304636 TBX19O60806 448 aa11.69□□□□□ -0.54
COL3A1-201ENST00000304636 LIMS3P0CW19 117 aa11.69□□□□□ -0.54
COL3A1-201ENST00000304636 LIMS4P0CW20 117 aa11.69□□□□□ -0.54
COL3A1-201ENST00000304636 PDZD11Q5EBL8 140 aa11.69□□□□□ -0.54
COL3A1-201ENST00000304636 PPP1R3BQ86XI6 285 aa11.69□□□□□ -0.54
COL3A1-201ENST00000304636 SLC38A9Q8NBW4 561 aa11.69□□□□□ -0.54
COL3A1-201ENST00000304636 SLC6A17Q9H1V8 727 aa11.69□□□□□ -0.54
COL3A1-201ENST00000304636 FOXJ3Q9UPW0 622 aa11.69□□□□□ -0.54
COL3A1-201ENST00000304636 KIR2DS1A0A191URI9 304 aa11.69□□□□□ -0.54
COL3A1-201ENST00000304636 SLC2A1P11166 492 aa11.69□□□□□ -0.54
COL3A1-201ENST00000304636 KIR2DS4P43632 304 aa11.69□□□□□ -0.54
COL3A1-201ENST00000304636 HSF1Q00613 529 aa11.69□□□□□ -0.54
COL3A1-201ENST00000304636 KIR2DS1Q14954 304 aa11.69□□□□□ -0.54
COL3A1-201ENST00000304636 ZNF77Q15935 545 aa11.69□□□□□ -0.54
COL3A1-201ENST00000304636 FLVCR1Q9Y5Y0 555 aa11.69□□□□□ -0.54
COL3A1-201ENST00000304636 PRSS37A4D1T9 235 aa11.69□□□□□ -0.54
COL3A1-201ENST00000304636 TNFRSF10CO14798 259 aa11.69□□□□□ -0.54
COL3A1-201ENST00000304636 PTAFRP25105 342 aa11.69□□□□□ -0.54
COL3A1-201ENST00000304636 ZNF85Q03923 595 aa11.69□□□□□ -0.54
COL3A1-201ENST00000304636 LSMEM1Q8N8F7 131 aa11.69□□□□□ -0.54
COL3A1-201ENST00000304636 MAP3K3Q99759 626 aa11.69□□□□□ -0.54
COL3A1-201ENST00000304636 PLEKHF2Q9H8W4 249 aa11.69□□□□□ -0.54
COL3A1-201ENST00000304636 OBP2BQ9NPH6 170 aa11.69□□□□□ -0.54
COL3A1-201ENST00000304636 SLC5A6Q9Y289 635 aa11.69□□□□□ -0.54
COL3A1-201ENST00000304636 V9GYH0 126 aa11.69□□□□□ -0.54
COL3A1-201ENST00000304636 CXorf51AA0A1B0GTR3 108 aa11.69□□□□□ -0.54
COL3A1-201ENST00000304636 TLCD2A6NGC4 264 aa11.69□□□□□ -0.54
COL3A1-201ENST00000304636 H7BYZ3 331 aa11.69□□□□□ -0.54
COL3A1-201ENST00000304636 CPN1P15169 458 aa11.69□□□□□ -0.54
COL3A1-201ENST00000304636 CD22P20273 847 aa11.69□□□□□ -0.54
COL3A1-201ENST00000304636 PTGER4P35408 488 aa11.69□□□□□ -0.54
COL3A1-201ENST00000304636 HAGHQ16775 308 aa11.69□□□□□ -0.54
COL3A1-201ENST00000304636 PLXDC2Q6UX71 529 aa11.69□□□□□ -0.54
COL3A1-201ENST00000304636 DTWD2Q8NBA8 298 aa11.69□□□□□ -0.54
COL3A1-201ENST00000304636 PHOSPHO2Q8TCD6 241 aa11.69□□□□□ -0.54
COL3A1-201ENST00000304636 ORAI1Q96D31 301 aa11.69□□□□□ -0.54
COL3A1-201ENST00000304636 CHST11Q9NPF2 352 aa11.69□□□□□ -0.54
COL3A1-201ENST00000304636 NSG1A0A0A6YYJ2 146 aa11.68□□□□□ -0.54
COL3A1-201ENST00000304636 SLC17A2O00624 439 aa11.68□□□□□ -0.54
COL3A1-201ENST00000304636 HSD17B6O14756 317 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms