RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 HHLA2Q9UM44 414 aa12.87□□□□□ -0.35
SHCBP1-201ENST00000303383 DNAJC13O75165 2243 aa12.87□□□□□ -0.35
SHCBP1-201ENST00000303383 PIN1P1O15428 100 aa12.86□□□□□ -0.35
SHCBP1-201ENST00000303383 DOK2O60496 412 aa12.86□□□□□ -0.35
SHCBP1-201ENST00000303383 HPNP05981 417 aa12.86□□□□□ -0.35
SHCBP1-201ENST00000303383 SNRPBP14678 240 aaKnown RBP12.86□□□□□ -0.35
SHCBP1-201ENST00000303383 ELK1P19419 428 aa12.86□□□□□ -0.35
SHCBP1-201ENST00000303383 MSR1P21757 451 aa12.86□□□□□ -0.35
SHCBP1-201ENST00000303383 PRKXP51817 358 aa12.86□□□□□ -0.35
SHCBP1-201ENST00000303383 GFRA1P56159 465 aa12.86□□□□□ -0.35
SHCBP1-201ENST00000303383 SLC10A1Q14973 349 aa12.86□□□□□ -0.35
SHCBP1-201ENST00000303383 OXA1LQ15070 435 aa12.86□□□□□ -0.35
SHCBP1-201ENST00000303383 CATSPERDQ86XM0 798 aa12.86□□□□□ -0.35
SHCBP1-201ENST00000303383 OR51A4Q8NGJ6 313 aa12.86□□□□□ -0.35
SHCBP1-201ENST00000303383 PPP1R14AQ96A00 147 aa12.86□□□□□ -0.35
SHCBP1-201ENST00000303383 RNF166Q96A37 237 aaPredicted RBP12.86□□□□□ -0.35
SHCBP1-201ENST00000303383 RHBDL2Q9NX52 303 aa12.86□□□□□ -0.35
SHCBP1-201ENST00000303383 ZNF79Q15937 498 aa12.86□□□□□ -0.35
SHCBP1-201ENST00000303383 STAC2Q6ZMT1 411 aa12.86□□□□□ -0.35
SHCBP1-201ENST00000303383 LRRC18Q8N456 261 aa12.86□□□□□ -0.35
SHCBP1-201ENST00000303383 OR13C3Q8NGS6 347 aa12.86□□□□□ -0.35
SHCBP1-201ENST00000303383 ZNF845Q96IR2 970 aaPredicted RBP12.86□□□□□ -0.35
SHCBP1-201ENST00000303383 MCTS1Q9ULC4 181 aaKnown RBP12.86□□□□□ -0.35
SHCBP1-201ENST00000303383 TRBV5-5A0A0J9YX44 114 aa12.86□□□□□ -0.35
SHCBP1-201ENST00000303383 ATF1P18846 271 aa12.86□□□□□ -0.35
SHCBP1-201ENST00000303383 APEX1P27695 318 aaKnown RBP12.86□□□□□ -0.35
SHCBP1-201ENST00000303383 TMEM244Q5VVB8 128 aa12.86□□□□□ -0.35
SHCBP1-201ENST00000303383 Q8N402 240 aa12.86□□□□□ -0.35
SHCBP1-201ENST00000303383 NELFAQ9H3P2 528 aa12.86□□□□□ -0.35
SHCBP1-201ENST00000303383 CDV3Q9UKY7 258 aaKnown RBP12.86□□□□□ -0.35
SHCBP1-201ENST00000303383 FLVCR1Q9Y5Y0 555 aa12.86□□□□□ -0.35
SHCBP1-201ENST00000303383 NCKAP5O14513 1909 aa12.86□□□□□ -0.35
SHCBP1-201ENST00000303383 A0A0G2JK05 382 aa12.85□□□□□ -0.35
SHCBP1-201ENST00000303383 CDK2AP1O14519 115 aa12.85□□□□□ -0.35
SHCBP1-201ENST00000303383 IL7P13232 177 aa12.85□□□□□ -0.35
SHCBP1-201ENST00000303383 HIST3H3Q16695 136 aa12.85□□□□□ -0.35
SHCBP1-201ENST00000303383 DEFB109BQ30KR1 87 aa12.85□□□□□ -0.35
SHCBP1-201ENST00000303383 DTX3Q8N9I9 347 aa12.85□□□□□ -0.35
SHCBP1-201ENST00000303383 MDS2Q8NDY4 140 aa12.85□□□□□ -0.35
SHCBP1-201ENST00000303383 HAS2Q92819 552 aa12.85□□□□□ -0.35
SHCBP1-201ENST00000303383 FAIMQ9NVQ4 179 aa12.85□□□□□ -0.35
SHCBP1-201ENST00000303383 MRPS7Q9Y2R9 242 aaKnown RBP12.85□□□□□ -0.35
SHCBP1-201ENST00000303383 LHFPL6Q9Y693 200 aa12.85□□□□□ -0.35
SHCBP1-201ENST00000303383 GALK2Q01415 458 aa12.85□□□□□ -0.35
SHCBP1-201ENST00000303383 MCEMP1Q8IX19 187 aa12.85□□□□□ -0.35
SHCBP1-201ENST00000303383 ZNF283Q8N7M2 679 aa12.85□□□□□ -0.35
SHCBP1-201ENST00000303383 TMEM54Q969K7 222 aa12.85□□□□□ -0.35
SHCBP1-201ENST00000303383 ZNF552Q9H707 407 aaPredicted RBP12.85□□□□□ -0.35
SHCBP1-201ENST00000303383 NIPAL2Q9H841 368 aa12.85□□□□□ -0.35
SHCBP1-201ENST00000303383 A0A0B4J203 849 aa12.85□□□□□ -0.35
SHCBP1-201ENST00000303383 ZNF891A8MT65 544 aaPredicted RBP12.85□□□□□ -0.35
SHCBP1-201ENST00000303383 RER1O15258 196 aa12.85□□□□□ -0.35
SHCBP1-201ENST00000303383 UBCP0CG48 685 aaKnown RBP12.85□□□□□ -0.35
SHCBP1-201ENST00000303383 IGF2-ASQ6U949 168 aa12.85□□□□□ -0.35
SHCBP1-201ENST00000303383 CFAP77Q6ZQR2 320 aa12.85□□□□□ -0.35
SHCBP1-201ENST00000303383 ZNF416Q9BWM5 594 aa12.85□□□□□ -0.35
SHCBP1-201ENST00000303383 HDHD2Q9H0R4 259 aa12.85□□□□□ -0.35
SHCBP1-201ENST00000303383 DEFB127Q9H1M4 99 aa12.85□□□□□ -0.35
SHCBP1-201ENST00000303383 RCE1Q9Y256 329 aa12.85□□□□□ -0.35
SHCBP1-201ENST00000303383 ZNF407Q9C0G0 2248 aa12.84□□□□□ -0.35
SHCBP1-201ENST00000303383 ZNF292O60281 2723 aa12.84□□□□□ -0.35
SHCBP1-201ENST00000303383 LOC107986453A0A1B0GWG9 222 aa12.84□□□□□ -0.35
SHCBP1-201ENST00000303383 IFITM5A6NNB3 132 aa12.84□□□□□ -0.35
SHCBP1-201ENST00000303383 PTTG1O95997 202 aa12.84□□□□□ -0.35
SHCBP1-201ENST00000303383 BAK1Q16611 211 aa12.84□□□□□ -0.35
SHCBP1-201ENST00000303383 ASCL5Q7RTU5 278 aa12.84□□□□□ -0.35
SHCBP1-201ENST00000303383 ABHD3Q8WU67 409 aa12.84□□□□□ -0.35
SHCBP1-201ENST00000303383 ADGRG7Q96K78 797 aa12.84□□□□□ -0.35
SHCBP1-201ENST00000303383 SDHCQ99643 169 aaPredicted RBP12.84□□□□□ -0.35
SHCBP1-201ENST00000303383 DLL3Q9NYJ7 618 aa12.84□□□□□ -0.35
SHCBP1-201ENST00000303383 A0A1B0GVC2 190 aa12.84□□□□□ -0.35
SHCBP1-201ENST00000303383 A0A1W2PQ09 198 aa12.84□□□□□ -0.35
SHCBP1-201ENST00000303383 A6NIN4 97 aa12.84□□□□□ -0.35
SHCBP1-201ENST00000303383 AIPO00170 330 aa12.84□□□□□ -0.35
SHCBP1-201ENST00000303383 P2RY10O00398 339 aa12.84□□□□□ -0.35
SHCBP1-201ENST00000303383 EIF4EP06730 217 aaKnown RBP12.84□□□□□ -0.35
SHCBP1-201ENST00000303383 C10orf128Q5T292 105 aa12.84□□□□□ -0.35
SHCBP1-201ENST00000303383 TMEM123Q8N131 208 aa12.84□□□□□ -0.35
SHCBP1-201ENST00000303383 ZIC4Q8N9L1 334 aa12.84□□□□□ -0.35
SHCBP1-201ENST00000303383 GJC3Q8NFK1 279 aa12.84□□□□□ -0.35
SHCBP1-201ENST00000303383 LGALS14Q8TCE9 139 aa12.84□□□□□ -0.35
SHCBP1-201ENST00000303383 MFRPQ9BY79 579 aa12.84□□□□□ -0.35
SHCBP1-201ENST00000303383 SP140LQ9H930 580 aa12.84□□□□□ -0.35
SHCBP1-201ENST00000303383 NOSIPQ9Y314 301 aaKnown RBP12.84□□□□□ -0.35
SHCBP1-201ENST00000303383 ACHEP22303 614 aa12.83□□□□□ -0.35
SHCBP1-201ENST00000303383 PTBP1P26599 531 aaKnown RBP eCLIP12.83□□□□□ -0.35
SHCBP1-201ENST00000303383 THBS2P35442 1172 aa12.83□□□□□ -0.35
SHCBP1-201ENST00000303383 LSM6P62312 80 aaKnown RBP12.83□□□□□ -0.35
SHCBP1-201ENST00000303383 P2RY14Q15391 338 aa12.83□□□□□ -0.35
SHCBP1-201ENST00000303383 PHYHD1Q5SRE7 291 aa12.83□□□□□ -0.35
SHCBP1-201ENST00000303383 ASB18Q6ZVZ8 466 aa12.83□□□□□ -0.35
SHCBP1-201ENST00000303383 FAM109AQ8N4B1 249 aa12.83□□□□□ -0.35
SHCBP1-201ENST00000303383 FDCSPQ8NFU4 85 aa12.83□□□□□ -0.35
SHCBP1-201ENST00000303383 OR4M1Q8NGD0 313 aa12.83□□□□□ -0.35
SHCBP1-201ENST00000303383 PAQR5Q9NXK6 330 aaPredicted RBP12.83□□□□□ -0.35
SHCBP1-201ENST00000303383 EMC3Q9P0I2 261 aa12.83□□□□□ -0.35
SHCBP1-201ENST00000303383 A0A1B0GVI7 797 aa12.83□□□□□ -0.36
SHCBP1-201ENST00000303383 MRPL33O75394 65 aaKnown RBP12.83□□□□□ -0.36
SHCBP1-201ENST00000303383 NPR2P20594 1047 aa12.83□□□□□ -0.36
SHCBP1-201ENST00000303383 GNALP38405 381 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms