RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 AQP6Q13520 282 aa16.53■□□□□ 0.24
CXCL3-201ENST00000296026 TMEM155Q4W5P6 130 aa16.53■□□□□ 0.24
CXCL3-201ENST00000296026 DEFB108BQ8NET1 73 aa16.53■□□□□ 0.24
CXCL3-201ENST00000296026 ITLN1Q8WWA0 313 aa16.53■□□□□ 0.24
CXCL3-201ENST00000296026 DVL3Q92997 716 aaPredicted RBP16.53■□□□□ 0.24
CXCL3-201ENST00000296026 RASD2Q96D21 266 aa16.53■□□□□ 0.24
CXCL3-201ENST00000296026 HAVCR1Q96D42 359 aa16.53■□□□□ 0.24
CXCL3-201ENST00000296026 FAM46AQ96IP4 442 aaKnown RBP16.53■□□□□ 0.24
CXCL3-201ENST00000296026 NDEL1Q9GZM8 345 aa16.53■□□□□ 0.24
CXCL3-201ENST00000296026 SYT4Q9H2B2 425 aa16.53■□□□□ 0.24
CXCL3-201ENST00000296026 ANKRD19PQ9H560 264 aa16.53■□□□□ 0.24
CXCL3-201ENST00000296026 NMNAT1Q9HAN9 279 aaPredicted RBP16.53■□□□□ 0.24
CXCL3-201ENST00000296026 NTN4Q9HB63 628 aa16.53■□□□□ 0.24
CXCL3-201ENST00000296026 PATZ1Q9HBE1 687 aaKnown RBP16.53■□□□□ 0.24
CXCL3-201ENST00000296026 IL19Q9UHD0 177 aa16.53■□□□□ 0.24
CXCL3-201ENST00000296026 PPP1R3CQ9UQK1 317 aa16.53■□□□□ 0.24
CXCL3-201ENST00000296026 TMEM5Q9Y2B1 443 aa16.53■□□□□ 0.24
CXCL3-201ENST00000296026 PPIAL4AQ9Y536 164 aa16.53■□□□□ 0.24
CXCL3-201ENST00000296026 SURF4O15260 269 aa16.52■□□□□ 0.24
CXCL3-201ENST00000296026 SLC16A7O60669 478 aa16.52■□□□□ 0.24
CXCL3-201ENST00000296026 COX4I1P13073 169 aa16.52■□□□□ 0.24
CXCL3-201ENST00000296026 EGR1P18146 543 aa16.52■□□□□ 0.24
CXCL3-201ENST00000296026 SLC6A9P48067 706 aa16.52■□□□□ 0.24
CXCL3-201ENST00000296026 ERFP50548 548 aa16.52■□□□□ 0.24
CXCL3-201ENST00000296026 SLC7A2P52569 658 aa16.52■□□□□ 0.24
CXCL3-201ENST00000296026 SEC61A1P61619 476 aaKnown RBP16.52■□□□□ 0.24
CXCL3-201ENST00000296026 BTG1P62324 171 aa16.52■□□□□ 0.24
CXCL3-201ENST00000296026 UBA52P62987 128 aaKnown RBP16.52■□□□□ 0.24
CXCL3-201ENST00000296026 KRR1Q13601 381 aaKnown RBP16.52■□□□□ 0.24
CXCL3-201ENST00000296026 ZMYND11Q15326 602 aa16.52■□□□□ 0.24
CXCL3-201ENST00000296026 TSEN54Q7Z6J9 526 aaKnown RBP16.52■□□□□ 0.24
CXCL3-201ENST00000296026 CYP4Z1Q86W10 505 aa16.52■□□□□ 0.24
CXCL3-201ENST00000296026 LRRC28Q86X40 367 aaPredicted RBP16.52■□□□□ 0.24
CXCL3-201ENST00000296026 SLC7A13Q8TCU3 470 aa16.52■□□□□ 0.24
CXCL3-201ENST00000296026 PTP4A1Q93096 173 aa16.52■□□□□ 0.24
CXCL3-201ENST00000296026 POP5Q969H6 163 aaKnown RBP16.52■□□□□ 0.24
CXCL3-201ENST00000296026 COG8Q96MW5 612 aa16.52■□□□□ 0.24
CXCL3-201ENST00000296026 OR2V2Q96R30 315 aa16.52■□□□□ 0.24
CXCL3-201ENST00000296026 SIGLEC11Q96RL6 698 aa16.52■□□□□ 0.24
CXCL3-201ENST00000296026 DDX28Q9NUL7 540 aaKnown RBP16.52■□□□□ 0.24
CXCL3-201ENST00000296026 ASH2LQ9UBL3 628 aa16.52■□□□□ 0.24
CXCL3-201ENST00000296026 SIGLEC7Q9Y286 467 aa16.52■□□□□ 0.24
CXCL3-201ENST00000296026 COA3Q9Y2R0 106 aaPredicted RBP16.52■□□□□ 0.24
CXCL3-201ENST00000296026 POLR3KQ9Y2Y1 108 aaPredicted RBP16.52■□□□□ 0.24
CXCL3-201ENST00000296026 ENPP4Q9Y6X5 453 aa16.52■□□□□ 0.24
CXCL3-201ENST00000296026 TRAPPC2LH3BP13 241 aa16.51■□□□□ 0.23
CXCL3-201ENST00000296026 PTP4A3O75365 173 aa16.51■□□□□ 0.23
CXCL3-201ENST00000296026 KHDRBS3O75525 346 aaKnown RBP16.51■□□□□ 0.23
CXCL3-201ENST00000296026 NDUFB2O95178 105 aa16.51■□□□□ 0.23
CXCL3-201ENST00000296026 SDHAP31040 664 aa16.51■□□□□ 0.23
CXCL3-201ENST00000296026 GSK3BP49841 420 aa16.51■□□□□ 0.23
CXCL3-201ENST00000296026 LSM6P62312 80 aaKnown RBP16.51■□□□□ 0.23
CXCL3-201ENST00000296026 GUCY1A3Q02108 690 aa16.51■□□□□ 0.23
CXCL3-201ENST00000296026 ZNF154Q13106 437 aa16.51■□□□□ 0.23
CXCL3-201ENST00000296026 AWAT1Q58HT5 328 aa16.51■□□□□ 0.23
CXCL3-201ENST00000296026 ARMCX4Q5H9R4 360 aa16.51■□□□□ 0.23
CXCL3-201ENST00000296026 RBMS3Q6XE24 437 aaKnown RBP16.51■□□□□ 0.23
CXCL3-201ENST00000296026 GLB1L2Q8IW92 636 aa16.51■□□□□ 0.23
CXCL3-201ENST00000296026 OR1F12Q8NHA8 337 aa16.51■□□□□ 0.23
CXCL3-201ENST00000296026 SGMS2Q8NHU3 365 aa16.51■□□□□ 0.23
CXCL3-201ENST00000296026 FAM162AQ96A26 154 aa16.51■□□□□ 0.23
CXCL3-201ENST00000296026 HOPXQ9BPY8 73 aaPredicted RBP16.51■□□□□ 0.23
CXCL3-201ENST00000296026 NRIP3Q9NQ35 241 aa16.51■□□□□ 0.23
CXCL3-201ENST00000296026 AUP1Q9Y679 476 aa16.51■□□□□ 0.23
CXCL3-201ENST00000296026 OR6C6A6NF89 314 aa16.5■□□□□ 0.23
CXCL3-201ENST00000296026 SOCS2O14508 198 aa16.5■□□□□ 0.23
CXCL3-201ENST00000296026 IMPA2O14732 288 aa16.5■□□□□ 0.23
CXCL3-201ENST00000296026 RAC2P15153 192 aa16.5■□□□□ 0.23
CXCL3-201ENST00000296026 NCK1P16333 377 aa16.5■□□□□ 0.23
CXCL3-201ENST00000296026 ZNF12P17014 697 aa16.5■□□□□ 0.23
CXCL3-201ENST00000296026 CCDC92Q53HC0 331 aaPredicted RBP16.5■□□□□ 0.23
CXCL3-201ENST00000296026 GPR139Q6DWJ6 353 aa16.5■□□□□ 0.23
CXCL3-201ENST00000296026 OR5AS1Q8N127 324 aa16.5■□□□□ 0.23
CXCL3-201ENST00000296026 SIGLECL1Q8N7X8 197 aa16.5■□□□□ 0.23
CXCL3-201ENST00000296026 ATG16L2Q8NAA4 619 aa16.5■□□□□ 0.23
CXCL3-201ENST00000296026 VSX1Q9NZR4 365 aaPredicted RBP16.5■□□□□ 0.23
CXCL3-201ENST00000296026 IL20RAQ9UHF4 553 aa16.5■□□□□ 0.23
CXCL3-201ENST00000296026 NUP50Q9UKX7 468 aa16.5■□□□□ 0.23
CXCL3-201ENST00000296026 INSIG2Q9Y5U4 225 aa16.5■□□□□ 0.23
CXCL3-201ENST00000296026 A8MXK9 166 aa16.49■□□□□ 0.23
CXCL3-201ENST00000296026 F5H0A9 414 aaPredicted RBP16.49■□□□□ 0.23
CXCL3-201ENST00000296026 TMEM178BH3BS89 294 aa16.49■□□□□ 0.23
CXCL3-201ENST00000296026 RER1O15258 196 aa16.49■□□□□ 0.23
CXCL3-201ENST00000296026 H1F0P07305 194 aaKnown RBP16.49■□□□□ 0.23
CXCL3-201ENST00000296026 DBHP09172 617 aa16.49■□□□□ 0.23
CXCL3-201ENST00000296026 MDH2P40926 338 aaKnown RBP16.49■□□□□ 0.23
CXCL3-201ENST00000296026 HLXQ14774 488 aaPredicted RBP16.49■□□□□ 0.23
CXCL3-201ENST00000296026 FGD3Q5JSP0 725 aa16.49■□□□□ 0.23
CXCL3-201ENST00000296026 C8orf82Q6P1X6 216 aaPredicted RBP16.49■□□□□ 0.23
CXCL3-201ENST00000296026 RSRC1Q96IZ7 334 aaKnown RBP16.49■□□□□ 0.23
CXCL3-201ENST00000296026 GPX7Q96SL4 187 aaPredicted RBP16.49■□□□□ 0.23
CXCL3-201ENST00000296026 KCTD14Q9BQ13 255 aaPredicted RBP16.49■□□□□ 0.23
CXCL3-201ENST00000296026 MRI1Q9BV20 369 aa16.49■□□□□ 0.23
CXCL3-201ENST00000296026 NUAK2Q9H093 628 aa16.49■□□□□ 0.23
CXCL3-201ENST00000296026 EFCAB1Q9HAE3 211 aa16.49■□□□□ 0.23
CXCL3-201ENST00000296026 GCM1Q9NP62 436 aa16.49■□□□□ 0.23
CXCL3-201ENST00000296026 PTTG3PQ9NZH4 202 aa16.49■□□□□ 0.23
CXCL3-201ENST00000296026 ZNF69Q9UC07 566 aa16.49■□□□□ 0.23
CXCL3-201ENST00000296026 FAM32AQ9Y421 112 aaKnown RBP16.49■□□□□ 0.23
CXCL3-201ENST00000296026 IER3IP1Q9Y5U9 82 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms