RNA–Protein interactions for RNA: ENST00000295550.8

COL6A3-201, Transcript of collagen type VI alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A3, Length 10,749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-201ENST00000295550 GSTP1P09211 210 aaKnown RBP9.05□□□□□ -0.96
COL6A3-201ENST00000295550 CD80P33681 288 aa9.05□□□□□ -0.96
COL6A3-201ENST00000295550 MOGAT2Q3SYC2 334 aa9.05□□□□□ -0.96
COL6A3-201ENST00000295550 OR6K3Q8NGY3 331 aa9.05□□□□□ -0.96
COL6A3-201ENST00000295550 WDR76Q9H967 626 aa9.05□□□□□ -0.96
COL6A3-201ENST00000295550 ZMAT3Q9HA38 289 aaKnown RBP9.05□□□□□ -0.96
COL6A3-201ENST00000295550 GFYI3L273 518 aa9.05□□□□□ -0.96
COL6A3-201ENST00000295550 OPN1LWP04000 364 aa9.05□□□□□ -0.96
COL6A3-201ENST00000295550 CRMP1Q14194 572 aa9.05□□□□□ -0.96
COL6A3-201ENST00000295550 PLPP6Q8IY26 295 aa9.05□□□□□ -0.96
COL6A3-201ENST00000295550 PRSS35Q8N3Z0 413 aa9.05□□□□□ -0.96
COL6A3-201ENST00000295550 OR51A4Q8NGJ6 313 aa9.05□□□□□ -0.96
COL6A3-201ENST00000295550 OR11L1Q8NGX0 322 aa9.05□□□□□ -0.96
COL6A3-201ENST00000295550 TMED6Q8WW62 240 aa9.05□□□□□ -0.96
COL6A3-201ENST00000295550 NUDT9Q9BW91 350 aa9.05□□□□□ -0.96
COL6A3-201ENST00000295550 NTSR1P30989 418 aa9.05□□□□□ -0.96
COL6A3-201ENST00000295550 ZNF542PQ5EBM4 170 aa9.05□□□□□ -0.96
COL6A3-201ENST00000295550 ZNF561Q8N587 486 aa9.05□□□□□ -0.96
COL6A3-201ENST00000295550 OR52N1Q8NH53 320 aa9.05□□□□□ -0.96
COL6A3-201ENST00000295550 RPUSD4Q96CM3 377 aaKnown RBP9.05□□□□□ -0.96
COL6A3-201ENST00000295550 KCNJ15Q99712 375 aa9.05□□□□□ -0.96
COL6A3-201ENST00000295550 HCSTQ9UBK5 93 aa9.05□□□□□ -0.96
COL6A3-201ENST00000295550 CXorf51AA0A1B0GTR3 108 aa9.05□□□□□ -0.96
COL6A3-201ENST00000295550 A0A1W2PPQ1 181 aa9.05□□□□□ -0.96
COL6A3-201ENST00000295550 ACSM4P0C7M7 580 aa9.05□□□□□ -0.96
COL6A3-201ENST00000295550 FABP4P15090 132 aa9.05□□□□□ -0.96
COL6A3-201ENST00000295550 C21orf62-AS1Q17RA5 79 aa9.05□□□□□ -0.96
COL6A3-201ENST00000295550 ZNF296Q8WUU4 475 aaPredicted RBP9.05□□□□□ -0.96
COL6A3-201ENST00000295550 ZNF727A8MUV8 499 aa9.05□□□□□ -0.96
COL6A3-201ENST00000295550 TIMM8AO60220 97 aaPredicted RBP9.05□□□□□ -0.96
COL6A3-201ENST00000295550 SMAD2Q15796 467 aaKnown RBP9.05□□□□□ -0.96
COL6A3-201ENST00000295550 FXNQ16595 210 aa9.05□□□□□ -0.96
COL6A3-201ENST00000295550 FGGYQ96C11 551 aa9.05□□□□□ -0.96
COL6A3-201ENST00000295550 NECTIN4Q96NY8 510 aa9.05□□□□□ -0.96
COL6A3-201ENST00000295550 UCK1Q9HA47 277 aa9.05□□□□□ -0.96
COL6A3-201ENST00000295550 LCTP09848 1927 aa9.05□□□□□ -0.96
COL6A3-201ENST00000295550 NXPH2O95156 264 aa9.05□□□□□ -0.96
COL6A3-201ENST00000295550 CNIH1O95406 144 aa9.05□□□□□ -0.96
COL6A3-201ENST00000295550 QDPRP09417 244 aa9.05□□□□□ -0.96
COL6A3-201ENST00000295550 RUNX3Q13761 415 aa9.05□□□□□ -0.96
COL6A3-201ENST00000295550 RPUSD3Q6P087 351 aaKnown RBP9.05□□□□□ -0.96
COL6A3-201ENST00000295550 OR52R1Q8NGF1 315 aa9.05□□□□□ -0.96
COL6A3-201ENST00000295550 DYNC2LI1Q8TCX1 351 aa9.05□□□□□ -0.96
COL6A3-201ENST00000295550 TMEM43Q9BTV4 400 aa9.05□□□□□ -0.96
COL6A3-201ENST00000295550 STRAPQ9Y3F4 350 aaKnown RBP9.05□□□□□ -0.96
COL6A3-201ENST00000295550 FABP9Q0Z7S8 132 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 C19orf35Q6ZS72 473 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 USP53Q70EK8 1073 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 COMMD1Q8N668 190 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 PLPP7Q8NBV4 271 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 DOK1Q99704 481 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 RBM38Q9H0Z9 239 aaKnown RBP9.04□□□□□ -0.96
COL6A3-201ENST00000295550 NXT1Q9UKK6 140 aaKnown RBP9.04□□□□□ -0.96
COL6A3-201ENST00000295550 LHX6Q9UPM6 363 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 F13BP05160 661 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 PGFP49763 221 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 ACOT7LQ6ZUV0 252 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 SYT9Q86SS6 491 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 CHST11Q9NPF2 352 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 PPP1CBP62140 327 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 PRDX1Q06830 199 aaKnown RBP9.04□□□□□ -0.96
COL6A3-201ENST00000295550 SYT14P1Q58G82 188 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 TAS2R5Q9NYW4 299 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 MUTYHQ9UIF7 546 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 SPINT2O43291 252 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 F11P03951 625 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 OR5B3Q8NH48 314 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 OR52A4PA6NMU1 304 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 RAB27BO00194 218 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 TMEM183BQ1AE95 376 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 OPN5Q6U736 354 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 AMDHD1Q96NU7 426 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 CCL26Q9Y258 94 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 NBASA2RRP1 2371 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 PRSS38A1L453 326 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 AQP7P3A6NL99 342 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 SFTA3P0C7M3 94 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 TM4SF4P48230 202 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 CCR9P51686 369 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 RNF165Q6ZSG1 346 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 KCNG2Q9UJ96 466 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 CD1EP15812 388 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 SLC38A6Q8IZM9 456 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 ZNF845Q96IR2 970 aaPredicted RBP9.04□□□□□ -0.96
COL6A3-201ENST00000295550 ACER3Q9NUN7 267 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 TAAR2Q9P1P5 351 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 PHOX2AO14813 284 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 SCO1O75880 301 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 ADH4P08319 380 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 SHC1P29353 583 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 TMEM97Q5BJF2 176 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 ZNF813Q6ZN06 617 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 CDC20BQ86Y33 519 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 LGI3Q8N145 548 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 NOL4LQ96MY1 436 aaPredicted RBP9.04□□□□□ -0.96
COL6A3-201ENST00000295550 SCPEP1Q9HB40 452 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 LOC285556D6RIA3 1793 aa9.04□□□□□ -0.96
COL6A3-201ENST00000295550 A0A087WV62 115 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 TMEM221A6NGB7 291 aa9.03□□□□□ -0.96
COL6A3-201ENST00000295550 CCSO14618 274 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 203.4 ms