RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 JAM3Q9BX67 310 aa16.03■□□□□ 0.16
CDC42EP3-201ENST00000295324 UNKLQ9H9P5 680 aaKnown RBP16.03■□□□□ 0.16
CDC42EP3-201ENST00000295324 KIAA1217Q5T5P2 1943 aa16.03■□□□□ 0.16
CDC42EP3-201ENST00000295324 PRKACAP17612 351 aa16.03■□□□□ 0.16
CDC42EP3-201ENST00000295324 FABP6P51161 128 aa16.03■□□□□ 0.16
CDC42EP3-201ENST00000295324 STPG1Q5TH74 334 aa16.03■□□□□ 0.16
CDC42EP3-201ENST00000295324 NANOGP1Q8N7R0 232 aa16.03■□□□□ 0.16
CDC42EP3-201ENST00000295324 SLCO4A1Q96BD0 722 aa16.03■□□□□ 0.16
CDC42EP3-201ENST00000295324 TMEM43Q9BTV4 400 aa16.03■□□□□ 0.16
CDC42EP3-201ENST00000295324 EXO1Q9UQ84 846 aaKnown RBP16.03■□□□□ 0.16
CDC42EP3-201ENST00000295324 STARD6P59095 220 aa16.03■□□□□ 0.16
CDC42EP3-201ENST00000295324 GPNMBQ14956 572 aa16.03■□□□□ 0.16
CDC42EP3-201ENST00000295324 SPCS2Q15005 226 aa16.03■□□□□ 0.16
CDC42EP3-201ENST00000295324 RBMS2Q15434 407 aaKnown RBP16.03■□□□□ 0.16
CDC42EP3-201ENST00000295324 RGS7BPQ6MZT1 257 aaPredicted RBP16.03■□□□□ 0.16
CDC42EP3-201ENST00000295324 NLRC3Q7RTR2 1065 aa16.03■□□□□ 0.16
CDC42EP3-201ENST00000295324 WDSUB1Q8N9V3 476 aa16.03■□□□□ 0.16
CDC42EP3-201ENST00000295324 DEFB108BQ8NET1 73 aa16.03■□□□□ 0.16
CDC42EP3-201ENST00000295324 OR1M1Q8NGA1 313 aa16.03■□□□□ 0.16
CDC42EP3-201ENST00000295324 OR52N5Q8NH56 324 aa16.03■□□□□ 0.16
CDC42EP3-201ENST00000295324 OR51F2Q8NH61 342 aa16.03■□□□□ 0.16
CDC42EP3-201ENST00000295324 FOXB1Q99853 325 aa16.03■□□□□ 0.16
CDC42EP3-201ENST00000295324 GABARAPL3Q9BY60 117 aa16.03■□□□□ 0.16
CDC42EP3-201ENST00000295324 CLEC2DQ9UHP7 191 aa16.03■□□□□ 0.16
CDC42EP3-201ENST00000295324 ALG1L2C9J202 215 aa16.03■□□□□ 0.16
CDC42EP3-201ENST00000295324 FXYD1O00168 92 aa16.03■□□□□ 0.16
CDC42EP3-201ENST00000295324 TUSC2O75896 110 aa16.03■□□□□ 0.16
CDC42EP3-201ENST00000295324 PRR35P0CG20 571 aa16.03■□□□□ 0.16
CDC42EP3-201ENST00000295324 ZNF728P0DKX0 622 aa16.03■□□□□ 0.16
CDC42EP3-201ENST00000295324 NFYAP23511 347 aaPredicted RBP16.03■□□□□ 0.16
CDC42EP3-201ENST00000295324 INSM1Q01101 510 aaPredicted RBP16.03■□□□□ 0.16
CDC42EP3-201ENST00000295324 TIGD3Q6B0B8 471 aa16.03■□□□□ 0.16
CDC42EP3-201ENST00000295324 OR4C3Q8NH37 302 aa16.03■□□□□ 0.16
CDC42EP3-201ENST00000295324 TSSK2Q96PF2 358 aa16.03■□□□□ 0.16
CDC42EP3-201ENST00000295324 ALKBH3Q96Q83 286 aaPredicted RBP16.03■□□□□ 0.16
CDC42EP3-201ENST00000295324 GLTPQ9NZD2 209 aa16.03■□□□□ 0.16
CDC42EP3-201ENST00000295324 CABIN1Q9Y6J0 2220 aa16.02■□□□□ 0.16
CDC42EP3-201ENST00000295324 IMPA2O14732 288 aa16.02■□□□□ 0.16
CDC42EP3-201ENST00000295324 SH2D1BO14796 132 aa16.02■□□□□ 0.16
CDC42EP3-201ENST00000295324 SPINT1O43278 529 aa16.02■□□□□ 0.16
CDC42EP3-201ENST00000295324 SULT1C4O75897 302 aa16.02■□□□□ 0.16
CDC42EP3-201ENST00000295324 IGHV4-34P06331 123 aa16.02■□□□□ 0.16
CDC42EP3-201ENST00000295324 NUBPLQ8TB37 319 aa16.02■□□□□ 0.16
CDC42EP3-201ENST00000295324 C1orf196B1AJZ1 125 aa16.02■□□□□ 0.16
CDC42EP3-201ENST00000295324 SRD5A2P31213 254 aa16.02■□□□□ 0.16
CDC42EP3-201ENST00000295324 RAE1P78406 368 aaKnown RBP16.02■□□□□ 0.16
CDC42EP3-201ENST00000295324 RBMS3Q6XE24 437 aaKnown RBP16.02■□□□□ 0.16
CDC42EP3-201ENST00000295324 OR5T1Q8NG75 326 aa16.02■□□□□ 0.16
CDC42EP3-201ENST00000295324 ZCCHC4Q9H5U6 513 aa16.02■□□□□ 0.16
CDC42EP3-201ENST00000295324 KCNE3Q9Y6H6 103 aa16.02■□□□□ 0.16
CDC42EP3-201ENST00000295324 SPTA1P02549 2419 aa16.02■□□□□ 0.16
CDC42EP3-201ENST00000295324 TMEM82A0PJX8 343 aa16.02■□□□□ 0.15
CDC42EP3-201ENST00000295324 EFSO43281 561 aa16.02■□□□□ 0.15
CDC42EP3-201ENST00000295324 NRASP01111 189 aa16.02■□□□□ 0.15
CDC42EP3-201ENST00000295324 TGM4P49221 684 aa16.02■□□□□ 0.15
CDC42EP3-201ENST00000295324 ZNF117Q03924 483 aa16.02■□□□□ 0.15
CDC42EP3-201ENST00000295324 PMPCAQ10713 525 aa16.02■□□□□ 0.15
CDC42EP3-201ENST00000295324 ZIC1Q15915 447 aa16.02■□□□□ 0.15
CDC42EP3-201ENST00000295324 IDO2Q6ZQW0 420 aa16.02■□□□□ 0.15
CDC42EP3-201ENST00000295324 PLPP5Q8NEB5 264 aa16.02■□□□□ 0.15
CDC42EP3-201ENST00000295324 OPA3Q9H6K4 179 aa16.02■□□□□ 0.15
CDC42EP3-201ENST00000295324 GPR84Q9NQS5 396 aa16.02■□□□□ 0.15
CDC42EP3-201ENST00000295324 A0A1B0GV50 99 aa16.02■□□□□ 0.15
CDC42EP3-201ENST00000295324 ANKRD61A6NGH8 418 aa16.02■□□□□ 0.15
CDC42EP3-201ENST00000295324 ARPC5O15511 151 aa16.02■□□□□ 0.15
CDC42EP3-201ENST00000295324 SLC2A10O95528 541 aa16.02■□□□□ 0.15
CDC42EP3-201ENST00000295324 POU3F3P20264 500 aaPredicted RBP16.02■□□□□ 0.15
CDC42EP3-201ENST00000295324 CNR1P21554 472 aa16.02■□□□□ 0.15
CDC42EP3-201ENST00000295324 GLRA1P23415 457 aa16.02■□□□□ 0.15
CDC42EP3-201ENST00000295324 RELAQ04206 551 aa16.02■□□□□ 0.15
CDC42EP3-201ENST00000295324 ELFN2Q5R3F8 820 aa16.02■□□□□ 0.15
CDC42EP3-201ENST00000295324 OR4A16Q8NH70 328 aa16.02■□□□□ 0.15
CDC42EP3-201ENST00000295324 MMP28Q9H239 520 aa16.02■□□□□ 0.15
CDC42EP3-201ENST00000295324 APC2O95996 2303 aa16.02■□□□□ 0.15
CDC42EP3-201ENST00000295324 LRP5LA4QPB2 252 aa16.01■□□□□ 0.15
CDC42EP3-201ENST00000295324 EPOPA6NHQ4 379 aa16.01■□□□□ 0.15
CDC42EP3-201ENST00000295324 AGAP14A8MT82 685 aa16.01■□□□□ 0.15
CDC42EP3-201ENST00000295324 BHLHE40O14503 412 aa16.01■□□□□ 0.15
CDC42EP3-201ENST00000295324 PNLIPP16233 465 aa16.01■□□□□ 0.15
CDC42EP3-201ENST00000295324 RPL35P42766 123 aaKnown RBP16.01■□□□□ 0.15
CDC42EP3-201ENST00000295324 RAB4BP61018 213 aa16.01■□□□□ 0.15
CDC42EP3-201ENST00000295324 ZNF529Q6P280 563 aa16.01■□□□□ 0.15
CDC42EP3-201ENST00000295324 LHFPL2Q6ZUX7 228 aa16.01■□□□□ 0.15
CDC42EP3-201ENST00000295324 NOXO1Q8NFA2 376 aa16.01■□□□□ 0.15
CDC42EP3-201ENST00000295324 UBE2FQ969M7 185 aa16.01■□□□□ 0.15
CDC42EP3-201ENST00000295324 GCM1Q9NP62 436 aa16.01■□□□□ 0.15
CDC42EP3-201ENST00000295324 IGHV5-10-1A0A0J9YXX1 117 aa16.01■□□□□ 0.15
CDC42EP3-201ENST00000295324 MFGE8Q08431 387 aaPredicted RBP16.01■□□□□ 0.15
CDC42EP3-201ENST00000295324 SLC9A3R2Q15599 337 aa16.01■□□□□ 0.15
CDC42EP3-201ENST00000295324 ADPRMQ3LIE5 342 aa16.01■□□□□ 0.15
CDC42EP3-201ENST00000295324 SYT6Q5T7P8 510 aaPredicted RBP16.01■□□□□ 0.15
CDC42EP3-201ENST00000295324 AMER3Q8N944 861 aa16.01■□□□□ 0.15
CDC42EP3-201ENST00000295324 GPR119Q8TDV5 335 aa16.01■□□□□ 0.15
CDC42EP3-201ENST00000295324 ARHGDIGQ99819 225 aa16.01■□□□□ 0.15
CDC42EP3-201ENST00000295324 CGGBP1Q9UFW8 167 aaPredicted RBP16.01■□□□□ 0.15
CDC42EP3-201ENST00000295324 TRPM6Q9BX84 2022 aa16.01■□□□□ 0.15
CDC42EP3-201ENST00000295324 GLAP06280 429 aa16.01■□□□□ 0.15
CDC42EP3-201ENST00000295324 GDNFP39905 211 aa16.01■□□□□ 0.15
CDC42EP3-201ENST00000295324 UBE2IP63279 158 aaKnown RBP16.01■□□□□ 0.15
CDC42EP3-201ENST00000295324 OR5H15A6NDH6 313 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms