RNA–Protein interactions for RNA: ENST00000294119.6

UBXN1-201, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene UBXN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-201ENST00000294119 OR6C65A6NJZ3 312 aa13.39□□□□□ -0.27
UBXN1-201ENST00000294119 PPP1R3DO95685 299 aa13.39□□□□□ -0.27
UBXN1-201ENST00000294119 TFP02787 698 aa13.39□□□□□ -0.27
UBXN1-201ENST00000294119 ZNF3P17036 446 aa13.39□□□□□ -0.27
UBXN1-201ENST00000294119 SNRPGP62308 76 aaKnown RBP13.39□□□□□ -0.27
UBXN1-201ENST00000294119 POU3F1Q03052 451 aaPredicted RBP13.39□□□□□ -0.27
UBXN1-201ENST00000294119 MED21Q13503 144 aa13.39□□□□□ -0.27
UBXN1-201ENST00000294119 SLC25A30Q5SVS4 291 aa13.39□□□□□ -0.27
UBXN1-201ENST00000294119 MEDAGQ5VYS4 303 aa13.39□□□□□ -0.27
UBXN1-201ENST00000294119 TMEM236Q5W0B7 351 aa13.39□□□□□ -0.27
UBXN1-201ENST00000294119 FAHD2BQ6P2I3 314 aaPredicted RBP13.39□□□□□ -0.27
UBXN1-201ENST00000294119 NHLRC1Q6VVB1 395 aa13.39□□□□□ -0.27
UBXN1-201ENST00000294119 PTCHD4Q6ZW05 846 aa13.39□□□□□ -0.27
UBXN1-201ENST00000294119 CREB3L2Q70SY1 520 aa13.39□□□□□ -0.27
UBXN1-201ENST00000294119 THAP5Q7Z6K1 395 aa13.39□□□□□ -0.27
UBXN1-201ENST00000294119 JAZF1Q86VZ6 243 aa13.39□□□□□ -0.27
UBXN1-201ENST00000294119 OR4Q3Q8NH05 313 aa13.39□□□□□ -0.27
UBXN1-201ENST00000294119 OR6X1Q8NH79 312 aa13.39□□□□□ -0.27
UBXN1-201ENST00000294119 FAM81AQ8TBF8 368 aa13.39□□□□□ -0.27
UBXN1-201ENST00000294119 UBASH3BQ8TF42 649 aa13.39□□□□□ -0.27
UBXN1-201ENST00000294119 DVL3Q92997 716 aaPredicted RBP13.39□□□□□ -0.27
UBXN1-201ENST00000294119 TMEM45BQ96B21 275 aa13.39□□□□□ -0.27
UBXN1-201ENST00000294119 APH1AQ96BI3 265 aa13.39□□□□□ -0.27
UBXN1-201ENST00000294119 ZNF775Q96BV0 537 aaPredicted RBP13.39□□□□□ -0.27
UBXN1-201ENST00000294119 FAHD2AQ96GK7 314 aa13.39□□□□□ -0.27
UBXN1-201ENST00000294119 C1orf147Q96MC9 270 aaPredicted RBP13.39□□□□□ -0.27
UBXN1-201ENST00000294119 Q96MT0 163 aa13.39□□□□□ -0.27
UBXN1-201ENST00000294119 C1QTNF5Q9BXJ0 243 aa13.39□□□□□ -0.27
UBXN1-201ENST00000294119 LPAR2Q9HBW0 351 aa13.39□□□□□ -0.27
UBXN1-201ENST00000294119 TVP23BQ9NYZ1 205 aa13.39□□□□□ -0.27
UBXN1-201ENST00000294119 IL20RAQ9UHF4 553 aa13.39□□□□□ -0.27
UBXN1-201ENST00000294119 ZNF346Q9UL40 294 aaKnown RBP13.39□□□□□ -0.27
UBXN1-201ENST00000294119 RCE1Q9Y256 329 aa13.39□□□□□ -0.27
UBXN1-201ENST00000294119 FLVCR1Q9Y5Y0 555 aa13.39□□□□□ -0.27
UBXN1-201ENST00000294119 WNK2Q9Y3S1 2297 aa13.38□□□□□ -0.27
UBXN1-201ENST00000294119 SNTNA6NMZ2 147 aa13.38□□□□□ -0.27
UBXN1-201ENST00000294119 ZNF726A6NNF4 738 aa13.38□□□□□ -0.27
UBXN1-201ENST00000294119 SURF4O15260 269 aa13.38□□□□□ -0.27
UBXN1-201ENST00000294119 OR4A8P0C604 315 aa13.38□□□□□ -0.27
UBXN1-201ENST00000294119 GAAP10253 952 aa13.38□□□□□ -0.27
UBXN1-201ENST00000294119 NTF4P34130 210 aa13.38□□□□□ -0.27
UBXN1-201ENST00000294119 CSNK2BP67870 215 aa13.38□□□□□ -0.27
UBXN1-201ENST00000294119 EFNB1P98172 346 aa13.38□□□□□ -0.27
UBXN1-201ENST00000294119 ARMC4Q5T2S8 1044 aa13.38□□□□□ -0.27
UBXN1-201ENST00000294119 KDM8Q8N371 416 aa13.38□□□□□ -0.27
UBXN1-201ENST00000294119 C17orf78Q8N4C9 275 aa13.38□□□□□ -0.27
UBXN1-201ENST00000294119 BPIFB2Q8N4F0 458 aa13.38□□□□□ -0.27
UBXN1-201ENST00000294119 IQCF1Q8N6M8 205 aa13.38□□□□□ -0.27
UBXN1-201ENST00000294119 RHOXF1Q8NHV9 184 aa13.38□□□□□ -0.27
UBXN1-201ENST00000294119 ZNF519Q8TB69 540 aa13.38□□□□□ -0.27
UBXN1-201ENST00000294119 TMEM163Q8TC26 289 aa13.38□□□□□ -0.27
UBXN1-201ENST00000294119 DOK1Q99704 481 aa13.38□□□□□ -0.27
UBXN1-201ENST00000294119 ZMAT3Q9HA38 289 aaKnown RBP13.38□□□□□ -0.27
UBXN1-201ENST00000294119 SLC17A5Q9NRA2 495 aa13.38□□□□□ -0.27
UBXN1-201ENST00000294119 AMDHD2Q9Y303 409 aa13.38□□□□□ -0.27
UBXN1-201ENST00000294119 ADAM18Q9Y3Q7 739 aa13.38□□□□□ -0.27
UBXN1-201ENST00000294119 TRAF3IP2O43734 574 aaPredicted RBP13.37□□□□□ -0.27
UBXN1-201ENST00000294119 RENP00797 406 aa13.37□□□□□ -0.27
UBXN1-201ENST00000294119 IGHV3-9P01782 118 aa13.37□□□□□ -0.27
UBXN1-201ENST00000294119 CENPAP49450 140 aa13.37□□□□□ -0.27
UBXN1-201ENST00000294119 LMO4P61968 165 aa13.37□□□□□ -0.27
UBXN1-201ENST00000294119 IL5RAQ01344 420 aa13.37□□□□□ -0.27
UBXN1-201ENST00000294119 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.37□□□□□ -0.27
UBXN1-201ENST00000294119 KRR1Q13601 381 aaKnown RBP13.37□□□□□ -0.27
UBXN1-201ENST00000294119 KRT80Q6KB66 452 aa13.37□□□□□ -0.27
UBXN1-201ENST00000294119 RHOUQ7L0Q8 258 aa13.37□□□□□ -0.27
UBXN1-201ENST00000294119 IGFN1Q86VF2 1251 aa13.37□□□□□ -0.27
UBXN1-201ENST00000294119 ZCCHC24Q8N2G6 241 aaKnown RBP13.37□□□□□ -0.27
UBXN1-201ENST00000294119 C1orf162Q8NEQ5 155 aaPredicted RBP13.37□□□□□ -0.27
UBXN1-201ENST00000294119 ASB10Q8WXI3 467 aa13.37□□□□□ -0.27
UBXN1-201ENST00000294119 SLC25A44Q96H78 314 aaPredicted RBP13.37□□□□□ -0.27
UBXN1-201ENST00000294119 LRR1Q96L50 414 aa13.37□□□□□ -0.27
UBXN1-201ENST00000294119 Q96M85 177 aa13.37□□□□□ -0.27
UBXN1-201ENST00000294119 TSPAN32Q96QS1 320 aa13.37□□□□□ -0.27
UBXN1-201ENST00000294119 ALG12Q9BV10 488 aa13.37□□□□□ -0.27
UBXN1-201ENST00000294119 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.37□□□□□ -0.27
UBXN1-201ENST00000294119 CLN6Q9NWW5 311 aa13.37□□□□□ -0.27
UBXN1-201ENST00000294119 ASB6Q9NWX5 421 aa13.37□□□□□ -0.27
UBXN1-201ENST00000294119 H2AFY2Q9P0M6 372 aaPredicted RBP13.37□□□□□ -0.27
UBXN1-201ENST00000294119 LRCH1Q9Y2L9 728 aa13.37□□□□□ -0.27
UBXN1-201ENST00000294119 MMP24Q9Y5R2 645 aa13.37□□□□□ -0.27
UBXN1-201ENST00000294119 COL7A1Q02388 2944 aa13.37□□□□□ -0.27
UBXN1-201ENST00000294119 TEX13CA0A0J9YWL9 993 aa13.36□□□□□ -0.27
UBXN1-201ENST00000294119 PRR23D1E9PI22 279 aaPredicted RBP13.36□□□□□ -0.27
UBXN1-201ENST00000294119 LYNX1G3V0Z9 82 aa13.36□□□□□ -0.27
UBXN1-201ENST00000294119 WNT9BO14905 357 aa13.36□□□□□ -0.27
UBXN1-201ENST00000294119 SERPINI2O75830 405 aa13.36□□□□□ -0.27
UBXN1-201ENST00000294119 IGHG1P01857 330 aa13.36□□□□□ -0.27
UBXN1-201ENST00000294119 PRR23D2P0DMB1 279 aaPredicted RBP13.36□□□□□ -0.27
UBXN1-201ENST00000294119 LYNX1P0DP58 116 aa13.36□□□□□ -0.27
UBXN1-201ENST00000294119 HLA-DOBP13765 273 aa13.36□□□□□ -0.27
UBXN1-201ENST00000294119 HIST1H1CP16403 213 aaKnown RBP13.36□□□□□ -0.27
UBXN1-201ENST00000294119 BIDP55957 195 aa13.36□□□□□ -0.27
UBXN1-201ENST00000294119 ISL1P61371 349 aa13.36□□□□□ -0.27
UBXN1-201ENST00000294119 TOP3AQ13472 1001 aaPredicted RBP13.36□□□□□ -0.27
UBXN1-201ENST00000294119 SLC35F1Q5T1Q4 408 aa13.36□□□□□ -0.27
UBXN1-201ENST00000294119 Q6ZPA2 131 aa13.36□□□□□ -0.27
UBXN1-201ENST00000294119 DOK3Q7L591 496 aa13.36□□□□□ -0.27
UBXN1-201ENST00000294119 ABHD12BQ7Z5M8 362 aaPredicted RBP13.36□□□□□ -0.27
UBXN1-201ENST00000294119 GID4Q8IVV7 300 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms