RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 BCL7CQ8WUZ0 217 aaPredicted RBP15.99■□□□□ 0.15
PCDHA13-201ENST00000289272 TMPRSS13Q9BYE2 586 aa15.99■□□□□ 0.15
PCDHA13-201ENST00000289272 THSD7AQ9UPZ6 1657 aa15.99■□□□□ 0.15
PCDHA13-201ENST00000289272 ADAMTSL1Q8N6G6 1762 aa15.99■□□□□ 0.15
PCDHA13-201ENST00000289272 Q3ZCU0 254 aa15.99■□□□□ 0.15
PCDHA13-201ENST00000289272 OR2T2Q6IF00 324 aa15.99■□□□□ 0.15
PCDHA13-201ENST00000289272 SGCZQ96LD1 299 aa15.99■□□□□ 0.15
PCDHA13-201ENST00000289272 SEC11CQ9BY50 192 aa15.99■□□□□ 0.15
PCDHA13-201ENST00000289272 PLEKHB1Q9UF11 243 aaPredicted RBP15.99■□□□□ 0.15
PCDHA13-201ENST00000289272 C19orf53Q9UNZ5 99 aaPredicted RBP15.99■□□□□ 0.15
PCDHA13-201ENST00000289272 F5H5K5 113 aa15.98■□□□□ 0.15
PCDHA13-201ENST00000289272 NME1P15531 152 aaKnown RBP15.98■□□□□ 0.15
PCDHA13-201ENST00000289272 NPY4RP50391 375 aa15.98■□□□□ 0.15
PCDHA13-201ENST00000289272 RAB11AP62491 216 aa15.98■□□□□ 0.15
PCDHA13-201ENST00000289272 IRF3Q14653 427 aa15.98■□□□□ 0.15
PCDHA13-201ENST00000289272 FXNQ16595 210 aa15.98■□□□□ 0.15
PCDHA13-201ENST00000289272 DBX2Q6ZNG2 339 aa15.98■□□□□ 0.15
PCDHA13-201ENST00000289272 UBR3Q6ZT12 1888 aa15.98■□□□□ 0.15
PCDHA13-201ENST00000289272 PHF7Q9BWX1 381 aaPredicted RBP15.98■□□□□ 0.15
PCDHA13-201ENST00000289272 AUNIPQ9H7T9 357 aa15.98■□□□□ 0.15
PCDHA13-201ENST00000289272 KIF13BQ9NQT8 1826 aa15.98■□□□□ 0.15
PCDHA13-201ENST00000289272 TRAPPC2LH3BP13 241 aa15.98■□□□□ 0.15
PCDHA13-201ENST00000289272 AP4M1O00189 453 aa15.98■□□□□ 0.15
PCDHA13-201ENST00000289272 EIF4E2O60573 245 aaKnown RBP15.98■□□□□ 0.15
PCDHA13-201ENST00000289272 FKBP2P26885 142 aaKnown RBP15.98■□□□□ 0.15
PCDHA13-201ENST00000289272 CD300CQ08708 224 aa15.98■□□□□ 0.15
PCDHA13-201ENST00000289272 CEBPZOSA8MTT3 80 aa15.98■□□□□ 0.15
PCDHA13-201ENST00000289272 M0QZK8 103 aa15.98■□□□□ 0.15
PCDHA13-201ENST00000289272 PHF1O43189 567 aaPredicted RBP15.98■□□□□ 0.15
PCDHA13-201ENST00000289272 GGCTO75223 188 aaKnown RBP15.98■□□□□ 0.15
PCDHA13-201ENST00000289272 GLSO94925 669 aaPredicted RBP15.98■□□□□ 0.15
PCDHA13-201ENST00000289272 FCGR2AP12318 317 aa15.98■□□□□ 0.15
PCDHA13-201ENST00000289272 RBM45Q8IUH3 476 aaKnown RBP15.98■□□□□ 0.15
PCDHA13-201ENST00000289272 FAM58AQ8N1B3 248 aa15.98■□□□□ 0.15
PCDHA13-201ENST00000289272 NTNG2Q96CW9 530 aa15.98■□□□□ 0.15
PCDHA13-201ENST00000289272 OR51I2Q9H344 312 aa15.98■□□□□ 0.15
PCDHA13-201ENST00000289272 OR6C76A6NM76 312 aa15.98■□□□□ 0.15
PCDHA13-201ENST00000289272 B4GALT3O60512 393 aa15.98■□□□□ 0.15
PCDHA13-201ENST00000289272 F13BP05160 661 aa15.98■□□□□ 0.15
PCDHA13-201ENST00000289272 MAP2K6P52564 334 aa15.98■□□□□ 0.15
PCDHA13-201ENST00000289272 OR2B8PP59922 312 aa15.98■□□□□ 0.15
PCDHA13-201ENST00000289272 ZNF85Q03923 595 aa15.98■□□□□ 0.15
PCDHA13-201ENST00000289272 TMEM128Q5BJH2 165 aa15.98■□□□□ 0.15
PCDHA13-201ENST00000289272 ARSJQ5FYB0 599 aaPredicted RBP15.98■□□□□ 0.15
PCDHA13-201ENST00000289272 CST9LP1Q5W188 147 aa15.98■□□□□ 0.15
PCDHA13-201ENST00000289272 NLGN4YQ8NFZ3 816 aaPredicted RBP15.98■□□□□ 0.15
PCDHA13-201ENST00000289272 KIRREL1Q96J84 757 aa15.98■□□□□ 0.15
PCDHA13-201ENST00000289272 CABLES2Q9BTV7 478 aa15.98■□□□□ 0.15
PCDHA13-201ENST00000289272 VN1R3Q9BXE9 311 aa15.98■□□□□ 0.15
PCDHA13-201ENST00000289272 RAB18Q9NP72 206 aa15.98■□□□□ 0.15
PCDHA13-201ENST00000289272 F6UZH7 168 aa15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 S100A7P31151 101 aa15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 RFC3P40938 356 aa15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 OR10A3P58181 314 aa15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 TOMM34Q15785 309 aaPredicted RBP15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 YOD1Q5VVQ6 348 aaPredicted RBP15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 GLIPR1L1Q6UWM5 242 aa15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 OR5L1Q8NGL2 311 aa15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 ARHGDIGQ99819 225 aa15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 ZNF107Q9UII5 783 aaPredicted RBP15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 EMC9Q9Y3B6 208 aa15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 SUSD5O60279 629 aa15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 AKR1C1Q04828 323 aa15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 MRM1Q6IN84 353 aaKnown RBP15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 TMEM182Q6ZP80 229 aaPredicted RBP15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 FBXW5Q969U6 566 aa15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 SCMH1Q96GD3 660 aa15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 RBM24Q9BX46 236 aaKnown RBP15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 SEMA6CQ9H3T2 930 aa15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 KIR2DS1A0A191URI9 304 aa15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 UPK1AO00322 258 aa15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 NME2P1O60361 137 aa15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 CD3DP04234 171 aa15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 IRF2P14316 349 aa15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 KIR2DS4P43632 304 aa15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 DHODHQ02127 395 aa15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 KIR2DS1Q14954 304 aa15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 VWA2Q5GFL6 755 aa15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 PLCXD3Q63HM9 321 aa15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 METRNLQ641Q3 311 aa15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 Q6ZNB5 142 aa15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 SSX7Q7RTT5 188 aa15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 GCNT2Q8N0V5 402 aa15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 OR5AP2Q8NGF4 316 aa15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 KIR3DX1Q9H7L2 352 aa15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 CDH20Q9HBT6 801 aa15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 RYDENQ9NUL5 291 aaKnown RBP15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 CACFD1Q9UGQ2 172 aa15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 PADI1Q9ULC6 663 aa15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 BOKQ9UMX3 212 aaPredicted RBP15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 NSG1A0A0A6YYJ2 146 aa15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 B3GALT4O96024 378 aa15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 RHOUQ7L0Q8 258 aa15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 NPRL2Q8WTW4 380 aa15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 DAZAP1Q96EP5 407 aaKnown RBP15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 BCO1Q9HAY6 547 aa15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 MTFP1Q9UDX5 166 aa15.97■□□□□ 0.15
PCDHA13-201ENST00000289272 TLCD2A6NGC4 264 aa15.96■□□□□ 0.15
PCDHA13-201ENST00000289272 NQO2P16083 231 aa15.96■□□□□ 0.15
PCDHA13-201ENST00000289272 SMAD4Q13485 552 aaKnown RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms