RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 GDF2Q9UK05 429 aaPredicted RBP17.13■□□□□ 0.33
BRAF-201ENST00000288602 NUBP2Q9Y5Y2 271 aa17.13■□□□□ 0.33
BRAF-201ENST00000288602 KNTC1P50748 2209 aa17.12■□□□□ 0.33
BRAF-201ENST00000288602 A6NL46 340 aa17.12■□□□□ 0.33
BRAF-201ENST00000288602 ZNF726A6NNF4 738 aa17.12■□□□□ 0.33
BRAF-201ENST00000288602 SLC2A1P11166 492 aa17.12■□□□□ 0.33
BRAF-201ENST00000288602 RAB11BQ15907 218 aa17.12■□□□□ 0.33
BRAF-201ENST00000288602 C6orf15Q6UXA7 325 aaPredicted RBP17.12■□□□□ 0.33
BRAF-201ENST00000288602 ADPRHL1Q8NDY3 354 aa17.12■□□□□ 0.33
BRAF-201ENST00000288602 MS4A3Q96HJ5 214 aa17.12■□□□□ 0.33
BRAF-201ENST00000288602 OR2B2Q9GZK3 357 aa17.12■□□□□ 0.33
BRAF-201ENST00000288602 C1orf198Q9H425 327 aa17.12■□□□□ 0.33
BRAF-201ENST00000288602 FAM206AQ9NX38 181 aa17.12■□□□□ 0.33
BRAF-201ENST00000288602 ASH2LQ9UBL3 628 aa17.12■□□□□ 0.33
BRAF-201ENST00000288602 MRPS18BQ9Y676 258 aaKnown RBP17.12■□□□□ 0.33
BRAF-201ENST00000288602 PCSK5Q92824 1860 aa17.12■□□□□ 0.33
BRAF-201ENST00000288602 MEIS3P1A6NDR6 274 aa17.12■□□□□ 0.33
BRAF-201ENST00000288602 CTAG2O75638 210 aa17.12■□□□□ 0.33
BRAF-201ENST00000288602 DHFRP00374 187 aa17.12■□□□□ 0.33
BRAF-201ENST00000288602 DSCR4P56555 118 aaPredicted RBP17.12■□□□□ 0.33
BRAF-201ENST00000288602 GPR85P60893 370 aa17.12■□□□□ 0.33
BRAF-201ENST00000288602 SLC35A1P78382 337 aa17.12■□□□□ 0.33
BRAF-201ENST00000288602 FCN2Q15485 313 aa17.12■□□□□ 0.33
BRAF-201ENST00000288602 NDUFA5Q16718 116 aa17.12■□□□□ 0.33
BRAF-201ENST00000288602 TIGD3Q6B0B8 471 aa17.12■□□□□ 0.33
BRAF-201ENST00000288602 OR6X1Q8NH79 312 aa17.12■□□□□ 0.33
BRAF-201ENST00000288602 ZNF775Q96BV0 537 aaPredicted RBP17.12■□□□□ 0.33
BRAF-201ENST00000288602 SLC17A2O00624 439 aa17.11■□□□□ 0.33
BRAF-201ENST00000288602 RER1O15258 196 aa17.11■□□□□ 0.33
BRAF-201ENST00000288602 GLSO94925 669 aaPredicted RBP17.11■□□□□ 0.33
BRAF-201ENST00000288602 IGFBP3P17936 291 aaPredicted RBP17.11■□□□□ 0.33
BRAF-201ENST00000288602 PRKXP51817 358 aa17.11■□□□□ 0.33
BRAF-201ENST00000288602 GUCA2AQ02747 115 aa17.11■□□□□ 0.33
BRAF-201ENST00000288602 DYRK1AQ13627 763 aa17.11■□□□□ 0.33
BRAF-201ENST00000288602 C17orf50Q8WW18 174 aa17.11■□□□□ 0.33
BRAF-201ENST00000288602 DACT3Q96B18 629 aaPredicted RBP17.11■□□□□ 0.33
BRAF-201ENST00000288602 CDV3Q9UKY7 258 aaKnown RBP17.11■□□□□ 0.33
BRAF-201ENST00000288602 R4GN57 208 aa17.11■□□□□ 0.33
BRAF-201ENST00000288602 TMEM272A0A1B0GTI8 110 aa17.11■□□□□ 0.33
BRAF-201ENST00000288602 TNFSF11O14788 317 aa17.11■□□□□ 0.33
BRAF-201ENST00000288602 TMEM127O75204 238 aa17.11■□□□□ 0.33
BRAF-201ENST00000288602 TTRP02766 147 aa17.11■□□□□ 0.33
BRAF-201ENST00000288602 ACSM4P0C7M7 580 aa17.11■□□□□ 0.33
BRAF-201ENST00000288602 JMJD7P0C870 316 aa17.11■□□□□ 0.33
BRAF-201ENST00000288602 OR10K2Q6IF99 312 aa17.11■□□□□ 0.33
BRAF-201ENST00000288602 JAGN1Q8N5M9 183 aa17.11■□□□□ 0.33
BRAF-201ENST00000288602 FGGYQ96C11 551 aa17.11■□□□□ 0.33
BRAF-201ENST00000288602 SCMH1Q96GD3 660 aa17.11■□□□□ 0.33
BRAF-201ENST00000288602 ZNF385AQ96PM9 386 aaKnown RBP17.11■□□□□ 0.33
BRAF-201ENST00000288602 PBOV1Q9GZY1 135 aa17.11■□□□□ 0.33
BRAF-201ENST00000288602 GHITMQ9H3K2 345 aa17.11■□□□□ 0.33
BRAF-201ENST00000288602 PLEKHA1Q9HB21 404 aa17.11■□□□□ 0.33
BRAF-201ENST00000288602 NCKAP5O14513 1909 aa17.1■□□□□ 0.33
BRAF-201ENST00000288602 A0A1W2PNU3 283 aaPredicted RBP17.1■□□□□ 0.33
BRAF-201ENST00000288602 XRCC3O43542 346 aa17.1■□□□□ 0.33
BRAF-201ENST00000288602 H2AFB2P0C5Z0 115 aa17.1■□□□□ 0.33
BRAF-201ENST00000288602 PHYHD1Q5SRE7 291 aa17.1■□□□□ 0.33
BRAF-201ENST00000288602 SLC25A47Q6Q0C1 308 aa17.1■□□□□ 0.33
BRAF-201ENST00000288602 DEGS2Q6QHC5 323 aa17.1■□□□□ 0.33
BRAF-201ENST00000288602 KLHL24Q6TFL4 600 aa17.1■□□□□ 0.33
BRAF-201ENST00000288602 YRDCQ86U90 279 aaKnown RBP17.1■□□□□ 0.33
BRAF-201ENST00000288602 SLC25A28Q96A46 364 aa17.1■□□□□ 0.33
BRAF-201ENST00000288602 SOX7Q9BT81 388 aa17.1■□□□□ 0.33
BRAF-201ENST00000288602 ASPMQ8IZT6 3477 aa17.1■□□□□ 0.33
BRAF-201ENST00000288602 TRAV18A0A075B6X5 111 aa17.1■□□□□ 0.33
BRAF-201ENST00000288602 A0A087WZY1 265 aa17.1■□□□□ 0.33
BRAF-201ENST00000288602 SULT1B1O43704 296 aa17.1■□□□□ 0.33
BRAF-201ENST00000288602 WDPCPO95876 746 aa17.1■□□□□ 0.33
BRAF-201ENST00000288602 ISG15P05161 165 aa17.1■□□□□ 0.33
BRAF-201ENST00000288602 ENPP1P22413 925 aa17.1■□□□□ 0.33
BRAF-201ENST00000288602 HTR2CP28335 458 aa17.1■□□□□ 0.33
BRAF-201ENST00000288602 MMP16P51512 607 aa17.1■□□□□ 0.33
BRAF-201ENST00000288602 H3F3AP84243 136 aa17.1■□□□□ 0.33
BRAF-201ENST00000288602 Q5BKY6 102 aa17.1■□□□□ 0.33
BRAF-201ENST00000288602 FAM166AQ6J272 317 aa17.1■□□□□ 0.33
BRAF-201ENST00000288602 ANKRD16Q6P6B7 361 aa17.1■□□□□ 0.33
BRAF-201ENST00000288602 TMEM81Q6P7N7 255 aa17.1■□□□□ 0.33
BRAF-201ENST00000288602 ZNF704Q6ZNC4 412 aaPredicted RBP17.1■□□□□ 0.33
BRAF-201ENST00000288602 LUZP2Q86TE4 346 aa17.1■□□□□ 0.33
BRAF-201ENST00000288602 TCTE3Q8IZS6 198 aa17.1■□□□□ 0.33
BRAF-201ENST00000288602 OR2AJ1Q8NGZ0 328 aa17.1■□□□□ 0.33
BRAF-201ENST00000288602 GIMAP1Q8WWP7 306 aa17.1■□□□□ 0.33
BRAF-201ENST00000288602 PHF21AQ96BD5 680 aa17.1■□□□□ 0.33
BRAF-201ENST00000288602 C20orf85Q9H1P6 137 aa17.1■□□□□ 0.33
BRAF-201ENST00000288602 ATG5Q9H1Y0 275 aa17.1■□□□□ 0.33
BRAF-201ENST00000288602 MED28Q9H204 178 aa17.1■□□□□ 0.33
BRAF-201ENST00000288602 ING3Q9NXR8 418 aa17.1■□□□□ 0.33
BRAF-201ENST00000288602 FOXJ2Q9P0K8 574 aa17.1■□□□□ 0.33
BRAF-201ENST00000288602 FARSAQ9Y285 508 aaKnown RBP17.1■□□□□ 0.33
BRAF-201ENST00000288602 DOCK10Q96BY6 2186 aa17.1■□□□□ 0.33
BRAF-201ENST00000288602 LOC100289279A0A1B0GTE1 492 aa17.09■□□□□ 0.33
BRAF-201ENST00000288602 GGT3PA6NGU5 568 aa17.09■□□□□ 0.33
BRAF-201ENST00000288602 ACHEP22303 614 aa17.09■□□□□ 0.33
BRAF-201ENST00000288602 GLT8D1Q68CQ7 371 aa17.09■□□□□ 0.33
BRAF-201ENST00000288602 ESX1Q8N693 406 aa17.09■□□□□ 0.33
BRAF-201ENST00000288602 OR11H7Q8NGC8 314 aa17.09■□□□□ 0.33
BRAF-201ENST00000288602 THRSPQ92748 146 aa17.09■□□□□ 0.33
BRAF-201ENST00000288602 OR10A4Q9H209 315 aa17.09■□□□□ 0.33
BRAF-201ENST00000288602 NCOA6Q14686 2063 aaPredicted RBP17.09■□□□□ 0.33
BRAF-201ENST00000288602 A0A0J9YW62 118 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms