RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 LCN1P1Q5VSP4 162 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 SHEQ5VZ18 495 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 KDM4DQ6B0I6 523 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 C11orf71Q6IPW1 123 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 SLC18B1Q6NT16 456 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 CFAP77Q6ZQR2 320 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 RFPL4BQ6ZWI9 263 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 DCXRQ7Z4W1 244 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 CPOQ8IVL8 374 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 ZNF101Q8IZC7 436 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 PQLC1Q8N2U9 271 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 PARP8Q8N3A8 854 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 CBR4Q8N4T8 237 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 WFDC11Q8NEX6 87 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 BBS1Q8NFJ9 593 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 SYNPRQ8TBG9 265 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 SLC25A40Q8TBP6 338 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 ZNRF4Q8WWF5 429 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 SLC7A6Q92536 515 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 MRPL24Q96A35 216 aaKnown RBP5.63□□□□□ -1.51
CD44-204ENST00000279452 ZMYND19Q96E35 227 aaPredicted RBP5.63□□□□□ -1.51
CD44-204ENST00000279452 POM121L2Q96KW2 1035 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 C4orf45Q96LM5 186 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 IL4I1Q96RQ9 567 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 INTS14Q96SY0 518 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 ATF6BQ99941 703 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 COPS4Q9BT78 406 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 C9orf16Q9BUW7 83 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 HCAR1Q9BXC0 346 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 MRPL37Q9BZE1 423 aaKnown RBP5.63□□□□□ -1.51
CD44-204ENST00000279452 RAB1BQ9H0U4 201 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 SLC25A19Q9HC21 320 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 HINT3Q9NQE9 182 aaKnown RBP5.63□□□□□ -1.51
CD44-204ENST00000279452 MRPL22Q9NWU5 206 aaKnown RBP5.63□□□□□ -1.51
CD44-204ENST00000279452 IMPAD1Q9NX62 359 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 TAAR3PQ9P1P4 343 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 GPR160Q9UJ42 338 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 KCNG2Q9UJ96 466 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 LHFPL6Q9Y693 200 aa5.63□□□□□ -1.51
CD44-204ENST00000279452 PLSCR5A0PG75 271 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 TRIM64A6NGJ6 449 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 TRIM64BA6NI03 449 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 H0YHG0 523 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 H7C417 338 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 SMAD7O15105 426 aaKnown RBP5.62□□□□□ -1.51
CD44-204ENST00000279452 PRODHO43272 600 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 SYNGR3O43761 229 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 TLX2O43763 284 aaPredicted RBP5.62□□□□□ -1.51
CD44-204ENST00000279452 PRKYO43930 277 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 SELENOFO60613 162 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 LY6HO94772 140 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 GLCEO94923 617 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 NGFP01138 241 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 IGHV4-39P01824 125 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 MT-ND5P03915 603 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 LCATP04180 440 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 COX5BP10606 129 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 NAT2P11245 290 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 PCSK6P29122 969 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 PPOXP50336 477 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 ALDH3A2P51648 485 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 CDC42P60953 191 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 PPP2R2BQ00005 443 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 TRIP10Q15642 601 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 LRRC36Q1X8D7 754 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 ZNF718Q3SXZ3 478 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 ZNF362Q5T0B9 420 aaPredicted RBP5.62□□□□□ -1.51
CD44-204ENST00000279452 SLX4IPQ5VYV7 408 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 CLEC2AQ6UVW9 174 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 ZBTB49Q6ZSB9 765 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 DPY19L4Q7Z388 723 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 BCDIN3DQ7Z5W3 292 aaKnown RBP5.62□□□□□ -1.51
CD44-204ENST00000279452 LRP11Q86VZ4 500 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 ZCCHC24Q8N2G6 241 aaKnown RBP5.62□□□□□ -1.51
CD44-204ENST00000279452 ZNF525Q8N782 197 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 ZNF283Q8N7M2 679 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 TCEANCQ8N8B7 351 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 FAM81AQ8TBF8 368 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 THEM6Q8WUY1 208 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 IPCEF1Q8WWN9 437 aaPredicted RBP5.62□□□□□ -1.51
CD44-204ENST00000279452 SPTSSAQ969W0 71 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 SLAMF6Q96DU3 332 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 MAP6Q96JE9 813 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 SORCS2Q96PQ0 1159 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 COQ7Q99807 217 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 OSBPL10Q9BXB5 764 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 TTTY10Q9BZA0 68 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 NMNAT2Q9BZQ4 307 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 OR2J1Q9GZK6 312 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 CXXC4Q9H2H0 198 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 ZNF701Q9NV72 531 aaPredicted RBP5.62□□□□□ -1.51
CD44-204ENST00000279452 SLCO1C1Q9NYB5 712 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 PTTG3PQ9NZH4 202 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 DNAJC27Q9NZQ0 273 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 MYEF2Q9P2K5 600 aaKnown RBP5.62□□□□□ -1.51
CD44-204ENST00000279452 CYB5R1Q9UHQ9 305 aa5.62□□□□□ -1.51
CD44-204ENST00000279452 TMEFF2Q9UIK5 374 aaPredicted RBP5.62□□□□□ -1.51
CD44-204ENST00000279452 FBXO9Q9UK97 447 aaPredicted RBP5.62□□□□□ -1.51
CD44-204ENST00000279452 ANKHD1Q8IWZ3 2542 aaKnown RBP5.62□□□□□ -1.51
CD44-204ENST00000279452 ZAR1LA6NP61 321 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms