RNA–Protein interactions for RNA: ENST00000272322.8

VPS54-201, Transcript of VPS54, GARP complex subunit, humanhuman

APPRIS P3 TSL 5 BASIC

Gene VPS54, Length 3,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-201ENST00000272322 PATE3B3GLJ2 98 aa14.86□□□□□ -0.03
VPS54-201ENST00000272322 LGALS8O00214 317 aa14.86□□□□□ -0.03
VPS54-201ENST00000272322 TNFRSF10AO00220 468 aa14.86□□□□□ -0.03
VPS54-201ENST00000272322 NDUFB6O95139 128 aa14.86□□□□□ -0.03
VPS54-201ENST00000272322 ARHGDIBP52566 201 aa14.86□□□□□ -0.03
VPS54-201ENST00000272322 OGFOD3Q6PK18 319 aa14.86□□□□□ -0.03
VPS54-201ENST00000272322 BAIAP2L2Q6UXY1 529 aa14.86□□□□□ -0.03
VPS54-201ENST00000272322 GPN1Q9HCN4 374 aaPredicted RBP14.86□□□□□ -0.03
VPS54-201ENST00000272322 PRR13Q9NZ81 148 aa14.86□□□□□ -0.03
VPS54-201ENST00000272322 NCOA6Q14686 2063 aaPredicted RBP14.85□□□□□ -0.03
VPS54-201ENST00000272322 TRBV5-7A0A0A0MS05 114 aa14.85□□□□□ -0.03
VPS54-201ENST00000272322 DXOO77932 396 aaKnown RBP14.85□□□□□ -0.03
VPS54-201ENST00000272322 GNB3P16520 340 aa14.85□□□□□ -0.03
VPS54-201ENST00000272322 PI3P19957 117 aa14.85□□□□□ -0.03
VPS54-201ENST00000272322 VAMP1P23763 118 aa14.85□□□□□ -0.03
VPS54-201ENST00000272322 FAM209AQ5JX71 171 aa14.85□□□□□ -0.03
VPS54-201ENST00000272322 COL13A1Q5TAT6 717 aaPredicted RBP14.85□□□□□ -0.03
VPS54-201ENST00000272322 H1FNTQ75WM6 255 aaPredicted RBP14.85□□□□□ -0.03
VPS54-201ENST00000272322 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.85□□□□□ -0.03
VPS54-201ENST00000272322 NAA40Q86UY6 237 aa14.85□□□□□ -0.03
VPS54-201ENST00000272322 RELL2Q8NC24 303 aaPredicted RBP14.85□□□□□ -0.03
VPS54-201ENST00000272322 MAFIPQ8WZ33 124 aa14.85□□□□□ -0.03
VPS54-201ENST00000272322 SELENOIQ9C0D9 397 aa14.85□□□□□ -0.03
VPS54-201ENST00000272322 SMOC1Q9H4F8 434 aa14.85□□□□□ -0.03
VPS54-201ENST00000272322 GLTPQ9NZD2 209 aa14.85□□□□□ -0.03
VPS54-201ENST00000272322 CEP250Q9BV73 2442 aa14.85□□□□□ -0.03
VPS54-201ENST00000272322 CTDSPLO15194 276 aa14.85□□□□□ -0.03
VPS54-201ENST00000272322 SYT7O43581 403 aa14.85□□□□□ -0.03
VPS54-201ENST00000272322 ZNF41P51814 821 aaPredicted RBP14.85□□□□□ -0.03
VPS54-201ENST00000272322 SGCAQ16586 387 aa14.85□□□□□ -0.03
VPS54-201ENST00000272322 OLFML2AQ68BL7 652 aa14.85□□□□□ -0.03
VPS54-201ENST00000272322 KCTD9Q7L273 389 aa14.85□□□□□ -0.03
VPS54-201ENST00000272322 ANKRD37Q7Z713 158 aa14.85□□□□□ -0.03
VPS54-201ENST00000272322 LRRC18Q8N456 261 aa14.85□□□□□ -0.03
VPS54-201ENST00000272322 TMEM234Q8WY98 164 aa14.85□□□□□ -0.03
VPS54-201ENST00000272322 PHYHIPQ92561 330 aa14.85□□□□□ -0.03
VPS54-201ENST00000272322 GNRHR2Q96P88 292 aa14.85□□□□□ -0.03
VPS54-201ENST00000272322 SORCS2Q96PQ0 1159 aa14.85□□□□□ -0.03
VPS54-201ENST00000272322 ELL3Q9HB65 397 aaPredicted RBP14.85□□□□□ -0.03
VPS54-201ENST00000272322 NBEAQ8NFP9 2946 aa14.85□□□□□ -0.03
VPS54-201ENST00000272322 SLC17A2O00624 439 aa14.85□□□□□ -0.03
VPS54-201ENST00000272322 SIGLEC6O43699 453 aa14.85□□□□□ -0.03
VPS54-201ENST00000272322 OR2T1O43869 369 aa14.85□□□□□ -0.03
VPS54-201ENST00000272322 CRYZL1O95825 349 aa14.85□□□□□ -0.03
VPS54-201ENST00000272322 PLATP00750 562 aa14.85□□□□□ -0.03
VPS54-201ENST00000272322 CXCL12P48061 93 aa14.85□□□□□ -0.03
VPS54-201ENST00000272322 DCAF7P61962 342 aa14.85□□□□□ -0.03
VPS54-201ENST00000272322 RBMS2Q15434 407 aaKnown RBP14.85□□□□□ -0.03
VPS54-201ENST00000272322 HACD4Q5VWC8 232 aa14.85□□□□□ -0.03
VPS54-201ENST00000272322 ABHD12BQ7Z5M8 362 aaPredicted RBP14.85□□□□□ -0.03
VPS54-201ENST00000272322 C17orf82Q86X59 251 aaPredicted RBP14.85□□□□□ -0.03
VPS54-201ENST00000272322 LIPHQ8WWY8 451 aa14.85□□□□□ -0.03
VPS54-201ENST00000272322 ADAT3Q96EY9 351 aaPredicted RBP14.85□□□□□ -0.03
VPS54-201ENST00000272322 SLC6A7Q99884 636 aa14.85□□□□□ -0.03
VPS54-201ENST00000272322 C7orf50Q9BRJ6 194 aaKnown RBP14.85□□□□□ -0.03
VPS54-201ENST00000272322 PDCD10Q9BUL8 212 aa14.85□□□□□ -0.03
VPS54-201ENST00000272322 UBQLN2Q9UHD9 624 aa14.85□□□□□ -0.03
VPS54-201ENST00000272322 TMEM131Q92545 1883 aa14.84□□□□□ -0.03
VPS54-201ENST00000272322 EML6Q6ZMW3 1958 aa14.84□□□□□ -0.03
VPS54-201ENST00000272322 NPIPB7O75200 414 aa14.84□□□□□ -0.03
VPS54-201ENST00000272322 CYB5AP00167 134 aa14.84□□□□□ -0.03
VPS54-201ENST00000272322 PMPCAQ10713 525 aa14.84□□□□□ -0.03
VPS54-201ENST00000272322 CAMK2BQ13554 666 aa14.84□□□□□ -0.03
VPS54-201ENST00000272322 ESCO2Q56NI9 601 aa14.84□□□□□ -0.03
VPS54-201ENST00000272322 GABRG1Q8N1C3 465 aa14.84□□□□□ -0.03
VPS54-201ENST00000272322 SUN5Q8TC36 379 aa14.84□□□□□ -0.03
VPS54-201ENST00000272322 EVA1AQ9H8M9 152 aa14.84□□□□□ -0.03
VPS54-201ENST00000272322 CNTD2Q9H8S5 307 aa14.84□□□□□ -0.03
VPS54-201ENST00000272322 A0A1B0GUH1 482 aa14.84□□□□□ -0.03
VPS54-201ENST00000272322 MT-ATP6P00846 226 aa14.84□□□□□ -0.03
VPS54-201ENST00000272322 NFYAP23511 347 aaPredicted RBP14.84□□□□□ -0.03
VPS54-201ENST00000272322 CRABP1P29762 137 aa14.84□□□□□ -0.03
VPS54-201ENST00000272322 FAUP35544 74 aaKnown RBP14.84□□□□□ -0.03
VPS54-201ENST00000272322 C17orf67Q0P5P2 114 aa14.84□□□□□ -0.03
VPS54-201ENST00000272322 FAM74A1Q5RGS3 127 aa14.84□□□□□ -0.03
VPS54-201ENST00000272322 CCDC28AQ8IWP9 274 aa14.84□□□□□ -0.03
VPS54-201ENST00000272322 LRRC20Q8TCA0 184 aa14.84□□□□□ -0.03
VPS54-201ENST00000272322 SLAMF6Q96DU3 332 aa14.84□□□□□ -0.03
VPS54-201ENST00000272322 MRPS17Q9Y2R5 130 aaKnown RBP14.84□□□□□ -0.03
VPS54-201ENST00000272322 C5orf63A6NC05 138 aa14.83□□□□□ -0.03
VPS54-201ENST00000272322 PDGFBP01127 241 aaPredicted RBP14.83□□□□□ -0.03
VPS54-201ENST00000272322 AKR1C4P17516 323 aa14.83□□□□□ -0.03
VPS54-201ENST00000272322 SLC6A9P48067 706 aa14.83□□□□□ -0.03
VPS54-201ENST00000272322 CLRN1P58418 232 aa14.83□□□□□ -0.03
VPS54-201ENST00000272322 CXADRP78310 365 aa14.83□□□□□ -0.03
VPS54-201ENST00000272322 KLHL24Q6TFL4 600 aa14.83□□□□□ -0.03
VPS54-201ENST00000272322 BPIFB2Q8N4F0 458 aa14.83□□□□□ -0.03
VPS54-201ENST00000272322 SEH1LQ96EE3 360 aa14.83□□□□□ -0.03
VPS54-201ENST00000272322 MVB12AQ96EY5 273 aa14.83□□□□□ -0.03
VPS54-201ENST00000272322 NICN1Q9BSH3 213 aa14.83□□□□□ -0.03
VPS54-201ENST00000272322 DEFB126Q9BYW3 111 aa14.83□□□□□ -0.03
VPS54-201ENST00000272322 SERINC1Q9NRX5 453 aa14.83□□□□□ -0.03
VPS54-201ENST00000272322 SLC5A6Q9Y289 635 aa14.83□□□□□ -0.03
VPS54-201ENST00000272322 NOP16Q9Y3C1 178 aaKnown RBP14.83□□□□□ -0.03
VPS54-201ENST00000272322 A0A1W2PPC1 479 aa14.83□□□□□ -0.04
VPS54-201ENST00000272322 F5H5K5 113 aa14.83□□□□□ -0.04
VPS54-201ENST00000272322 IFNA7P01567 189 aa14.83□□□□□ -0.04
VPS54-201ENST00000272322 AKAIN1P0CW23 69 aa14.83□□□□□ -0.04
VPS54-201ENST00000272322 HSD11B1P28845 292 aa14.83□□□□□ -0.04
VPS54-201ENST00000272322 C3orf33Q6P1S2 294 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms