RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 ADGRE4PQ86SQ3 457 aa11.14□□□□□ -0.63
CHMP3-201ENST00000263856 FGGYQ96C11 551 aa11.14□□□□□ -0.63
CHMP3-201ENST00000263856 CYYR1Q96J86 154 aa11.14□□□□□ -0.63
CHMP3-201ENST00000263856 ZNF587Q96SQ5 575 aaPredicted RBP11.14□□□□□ -0.63
CHMP3-201ENST00000263856 SLC6A15Q9H2J7 730 aa11.14□□□□□ -0.63
CHMP3-201ENST00000263856 GLS2Q9UI32 602 aa11.14□□□□□ -0.63
CHMP3-201ENST00000263856 FARS2O95363 451 aaKnown RBP11.13□□□□□ -0.63
CHMP3-201ENST00000263856 CNR1P21554 472 aa11.13□□□□□ -0.63
CHMP3-201ENST00000263856 CD1CP29017 333 aa11.13□□□□□ -0.63
CHMP3-201ENST00000263856 HRH1P35367 487 aa11.13□□□□□ -0.63
CHMP3-201ENST00000263856 PLCXD2Q0VAA5 305 aa11.13□□□□□ -0.63
CHMP3-201ENST00000263856 STK11Q15831 433 aa11.13□□□□□ -0.63
CHMP3-201ENST00000263856 COX15Q7KZN9 410 aa11.13□□□□□ -0.63
CHMP3-201ENST00000263856 GALNTL5Q7Z4T8 443 aa11.13□□□□□ -0.63
CHMP3-201ENST00000263856 CLRN3Q8NCR9 226 aa11.13□□□□□ -0.63
CHMP3-201ENST00000263856 ADAD2Q8NCV1 583 aaKnown RBP11.13□□□□□ -0.63
CHMP3-201ENST00000263856 OR5M8Q8NGP6 311 aa11.13□□□□□ -0.63
CHMP3-201ENST00000263856 ASB12Q8WXK4 309 aa11.13□□□□□ -0.63
CHMP3-201ENST00000263856 EMC6Q9BV81 110 aa11.13□□□□□ -0.63
CHMP3-201ENST00000263856 SLC25A32Q9H2D1 315 aa11.13□□□□□ -0.63
CHMP3-201ENST00000263856 OBP2AQ9NY56 170 aa11.13□□□□□ -0.63
CHMP3-201ENST00000263856 LHX6Q9UPM6 363 aa11.13□□□□□ -0.63
CHMP3-201ENST00000263856 VDAC3Q9Y277 283 aa11.13□□□□□ -0.63
CHMP3-201ENST00000263856 A0A0D9SG52 128 aa11.13□□□□□ -0.63
CHMP3-201ENST00000263856 TMEM150CB9EJG8 249 aa11.13□□□□□ -0.63
CHMP3-201ENST00000263856 STK17BO94768 372 aa11.13□□□□□ -0.63
CHMP3-201ENST00000263856 SLC2A1P11166 492 aa11.13□□□□□ -0.63
CHMP3-201ENST00000263856 PGAM2P15259 253 aa11.13□□□□□ -0.63
CHMP3-201ENST00000263856 SLC9A3R2Q15599 337 aa11.13□□□□□ -0.63
CHMP3-201ENST00000263856 JMJD6Q6NYC1 403 aaPredicted RBP11.13□□□□□ -0.63
CHMP3-201ENST00000263856 OR13C8Q8NGS7 320 aa11.13□□□□□ -0.63
CHMP3-201ENST00000263856 OR13C9Q8NGT0 318 aa11.13□□□□□ -0.63
CHMP3-201ENST00000263856 ROBO4Q8WZ75 1007 aa11.13□□□□□ -0.63
CHMP3-201ENST00000263856 SELENOIQ9C0D9 397 aa11.13□□□□□ -0.63
CHMP3-201ENST00000263856 MED29Q9NX70 200 aa11.13□□□□□ -0.63
CHMP3-201ENST00000263856 RASL12Q9NYN1 266 aa11.13□□□□□ -0.63
CHMP3-201ENST00000263856 HHLA2Q9UM44 414 aa11.13□□□□□ -0.63
CHMP3-201ENST00000263856 POLR1DQ9Y2S0 133 aa11.13□□□□□ -0.63
CHMP3-201ENST00000263856 PHF3Q92576 2039 aaKnown RBP11.13□□□□□ -0.63
CHMP3-201ENST00000263856 PCDH15Q96QU1 1955 aa11.12□□□□□ -0.63
CHMP3-201ENST00000263856 F8W036 122 aa11.12□□□□□ -0.63
CHMP3-201ENST00000263856 H7C2Y5 167 aa11.12□□□□□ -0.63
CHMP3-201ENST00000263856 AGPAT2O15120 278 aa11.12□□□□□ -0.63
CHMP3-201ENST00000263856 ERCC1P07992 297 aaPredicted RBP11.12□□□□□ -0.63
CHMP3-201ENST00000263856 GLULP15104 373 aa11.12□□□□□ -0.63
CHMP3-201ENST00000263856 TNFRSF4P43489 277 aa11.12□□□□□ -0.63
CHMP3-201ENST00000263856 RPL27P61353 136 aaKnown RBP11.12□□□□□ -0.63
CHMP3-201ENST00000263856 BLOC1S1P78537 153 aa11.12□□□□□ -0.63
CHMP3-201ENST00000263856 FGL1Q08830 312 aa11.12□□□□□ -0.63
CHMP3-201ENST00000263856 GUCA2BQ16661 112 aa11.12□□□□□ -0.63
CHMP3-201ENST00000263856 ISXQ2M1V0 245 aa11.12□□□□□ -0.63
CHMP3-201ENST00000263856 VWA2Q5GFL6 755 aa11.12□□□□□ -0.63
CHMP3-201ENST00000263856 MANEAQ5SRI9 462 aa11.12□□□□□ -0.63
CHMP3-201ENST00000263856 PDSS1Q5T2R2 415 aa11.12□□□□□ -0.63
CHMP3-201ENST00000263856 TMPPEQ6ZT21 453 aa11.12□□□□□ -0.63
CHMP3-201ENST00000263856 ZFP82Q8N141 532 aa11.12□□□□□ -0.63
CHMP3-201ENST00000263856 RNF128Q8TEB7 428 aa11.12□□□□□ -0.63
CHMP3-201ENST00000263856 C2CD4CQ8TF44 421 aa11.12□□□□□ -0.63
CHMP3-201ENST00000263856 C5orf34Q96MH7 638 aa11.12□□□□□ -0.63
CHMP3-201ENST00000263856 FBXO9Q9UK97 447 aaPredicted RBP11.12□□□□□ -0.63
CHMP3-201ENST00000263856 ZNF705EA8MWA4 302 aaPredicted RBP11.12□□□□□ -0.63
CHMP3-201ENST00000263856 H3BML4 177 aa11.12□□□□□ -0.63
CHMP3-201ENST00000263856 PHYHO14832 338 aa11.12□□□□□ -0.63
CHMP3-201ENST00000263856 CD96P40200 585 aa11.12□□□□□ -0.63
CHMP3-201ENST00000263856 MECP2P51608 486 aaKnown RBP11.12□□□□□ -0.63
CHMP3-201ENST00000263856 FUT7Q11130 342 aa11.12□□□□□ -0.63
CHMP3-201ENST00000263856 ELOCQ15369 112 aa11.12□□□□□ -0.63
CHMP3-201ENST00000263856 CLVS2Q5SYC1 327 aa11.12□□□□□ -0.63
CHMP3-201ENST00000263856 TMEM71Q6P5X7 295 aa11.12□□□□□ -0.63
CHMP3-201ENST00000263856 TMEM200AQ86VY9 491 aa11.12□□□□□ -0.63
CHMP3-201ENST00000263856 GTPBP8Q8N3Z3 284 aaPredicted RBP11.12□□□□□ -0.63
CHMP3-201ENST00000263856 TMED6Q8WW62 240 aa11.12□□□□□ -0.63
CHMP3-201ENST00000263856 SLC25A21Q9BQT8 299 aaPredicted RBP11.12□□□□□ -0.63
CHMP3-201ENST00000263856 PIAS3Q9Y6X2 628 aa11.12□□□□□ -0.63
CHMP3-201ENST00000263856 IGHV3-20A0A0C4DH32 117 aa11.12□□□□□ -0.63
CHMP3-201ENST00000263856 A0A1W2PPC1 479 aa11.12□□□□□ -0.63
CHMP3-201ENST00000263856 SHISA8B8ZZ34 492 aa11.12□□□□□ -0.63
CHMP3-201ENST00000263856 BCL2L11O43521 198 aa11.12□□□□□ -0.63
CHMP3-201ENST00000263856 H2BFMP0C1H6 154 aa11.12□□□□□ -0.63
CHMP3-201ENST00000263856 RORAP35398 523 aa11.12□□□□□ -0.63
CHMP3-201ENST00000263856 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.12□□□□□ -0.63
CHMP3-201ENST00000263856 TMEM229BQ8NBD8 167 aa11.12□□□□□ -0.63
CHMP3-201ENST00000263856 MARCH1Q8TCQ1 289 aa11.12□□□□□ -0.63
CHMP3-201ENST00000263856 ELP5Q8TE02 316 aa11.12□□□□□ -0.63
CHMP3-201ENST00000263856 PHB2Q99623 299 aa11.12□□□□□ -0.63
CHMP3-201ENST00000263856 GABRG3Q99928 467 aa11.12□□□□□ -0.63
CHMP3-201ENST00000263856 NUDT9Q9BW91 350 aa11.12□□□□□ -0.63
CHMP3-201ENST00000263856 GAREM1Q9H706 876 aa11.12□□□□□ -0.63
CHMP3-201ENST00000263856 OR52A1Q9UKL2 312 aa11.12□□□□□ -0.63
CHMP3-201ENST00000263856 CLDN16Q9Y5I7 305 aa11.12□□□□□ -0.63
CHMP3-201ENST00000263856 TMED7-TICAM2A0A0A6YYA0 188 aa11.11□□□□□ -0.63
CHMP3-201ENST00000263856 KIR2DS5A0A0G2JLQ3 304 aa11.11□□□□□ -0.63
CHMP3-201ENST00000263856 A0A0G2JNG1 304 aa11.11□□□□□ -0.63
CHMP3-201ENST00000263856 METTL21EPA6NDL7 271 aa11.11□□□□□ -0.63
CHMP3-201ENST00000263856 KIR2DS3K7RE56 304 aa11.11□□□□□ -0.63
CHMP3-201ENST00000263856 ZNF208O43345 1280 aa11.11□□□□□ -0.63
CHMP3-201ENST00000263856 CASRP41180 1078 aa11.11□□□□□ -0.63
CHMP3-201ENST00000263856 ARL4DP49703 201 aa11.11□□□□□ -0.63
CHMP3-201ENST00000263856 FBXW4P57775 412 aa11.11□□□□□ -0.63
CHMP3-201ENST00000263856 PPIAP62937 165 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms