RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 PCSK6P29122 969 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 GSK3AP49840 483 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 ART1P52961 327 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 EDDM3BP56851 147 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 HTD2P86397 168 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 ZNF239Q16600 458 aaKnown RBP7.44□□□□□ -1.22
PTPN3-201ENST00000262539 TBC1D28Q2M2D7 210 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 GSG1LQ6UXU4 331 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 MIB2Q96AX9 1013 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 GFOD1Q9NXC2 390 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 TRAPPC2LQ9UL33 140 aa7.44□□□□□ -1.22
PTPN3-201ENST00000262539 LSM2Q9Y333 95 aaKnown RBP7.44□□□□□ -1.22
PTPN3-201ENST00000262539 B4DXG7 233 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 C4orf51C9J302 202 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 SULT1C2O00338 296 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 OGG1O15527 345 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 MPIG6BO95866 241 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 TBPP20226 339 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 ABCD3P28288 659 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 EFNA3P52797 238 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 RPL18Q07020 188 aaKnown RBP7.43□□□□□ -1.22
PTPN3-201ENST00000262539 ZNF616Q08AN1 781 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 SLC22A25Q6T423 547 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 LYPD8Q6UX82 237 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 ESPNLQ6ZVH7 1005 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 MKXQ8IYA7 352 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 DCLRE1CQ96SD1 692 aaKnown RBP7.43□□□□□ -1.22
PTPN3-201ENST00000262539 GINS3Q9BRX5 216 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 FLRT3Q9NZU0 649 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 EXTL2Q9UBQ6 330 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 V9GY05 133 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 ANKRD36A6QL64 1941 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 ENPP1P22413 925 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 CAMLGP49069 296 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 MMP16P51512 607 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 AGFG1P52594 562 aaKnown RBP7.43□□□□□ -1.22
PTPN3-201ENST00000262539 HOXC5Q00444 222 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 ZNF117Q03924 483 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 GPR176Q14439 515 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 ACKR1Q16570 336 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 SLC25A53Q5H9E4 307 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 C22orf42Q6IC83 251 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 MRPL14Q6P1L8 145 aaKnown RBP7.43□□□□□ -1.22
PTPN3-201ENST00000262539 GFRALQ6UXV0 394 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 FBXW12Q6X9E4 464 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 ZNF431Q8TF32 576 aaPredicted RBP7.43□□□□□ -1.22
PTPN3-201ENST00000262539 Q96M85 177 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 TECTBQ96PL2 329 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 C1orf198Q9H425 327 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 NTN3O00634 580 aaPredicted RBP7.43□□□□□ -1.22
PTPN3-201ENST00000262539 CSF1P09603 554 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 NFYBP25208 207 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 TNFSF8P32971 234 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 OR4Q3Q8NH05 313 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 ABHD4Q8TB40 342 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 SPSB2Q99619 263 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 TSPAN10Q9H1Z9 355 aaPredicted RBP7.43□□□□□ -1.22
PTPN3-201ENST00000262539 MRPS18CQ9Y3D5 142 aaKnown RBP7.43□□□□□ -1.22
PTPN3-201ENST00000262539 GABARAPH6UMI1 98 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 SLC16A7O60669 478 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 RP2O75695 350 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 GPX5O75715 221 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 APEX1P27695 318 aaKnown RBP7.43□□□□□ -1.22
PTPN3-201ENST00000262539 ROM1Q03395 351 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 ALKBH1Q13686 389 aaKnown RBP7.43□□□□□ -1.22
PTPN3-201ENST00000262539 C2orf76Q3KRA6 126 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 DMKNQ6E0U4 476 aaPredicted RBP7.43□□□□□ -1.22
PTPN3-201ENST00000262539 FAM57BQ71RH2 274 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 AAED1Q7RTV5 226 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 OR8D4Q8NGM9 314 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 ADIPOR1Q96A54 375 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 UBL7Q96S82 380 aaPredicted RBP7.43□□□□□ -1.22
PTPN3-201ENST00000262539 A8MXE2 369 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 J3QW42 95 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 M0R082 166 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 NDUFB7P17568 137 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 LSM6P62312 80 aaKnown RBP7.43□□□□□ -1.22
PTPN3-201ENST00000262539 HSD17B8Q92506 261 aa7.43□□□□□ -1.22
PTPN3-201ENST00000262539 ZNF705EA8MWA4 302 aaPredicted RBP7.42□□□□□ -1.22
PTPN3-201ENST00000262539 ZNF587BE7ETH6 402 aa7.42□□□□□ -1.22
PTPN3-201ENST00000262539 ANXA7P20073 488 aaKnown RBP7.42□□□□□ -1.22
PTPN3-201ENST00000262539 CCL7P80098 99 aa7.42□□□□□ -1.22
PTPN3-201ENST00000262539 TMEM176BQ3YBM2 270 aaPredicted RBP7.42□□□□□ -1.22
PTPN3-201ENST00000262539 SLC36A2Q495M3 483 aa7.42□□□□□ -1.22
PTPN3-201ENST00000262539 ACTBL2Q562R1 376 aa7.42□□□□□ -1.22
PTPN3-201ENST00000262539 MAML2Q8IZL2 1156 aaPredicted RBP7.42□□□□□ -1.22
PTPN3-201ENST00000262539 FAM83FQ8NEG4 500 aaPredicted RBP7.42□□□□□ -1.22
PTPN3-201ENST00000262539 PTX4Q96A99 478 aa7.42□□□□□ -1.22
PTPN3-201ENST00000262539 ZMYND19Q96E35 227 aaPredicted RBP7.42□□□□□ -1.22
PTPN3-201ENST00000262539 MALSU1Q96EH3 234 aa7.42□□□□□ -1.22
PTPN3-201ENST00000262539 ZFP57Q9NU63 452 aa7.42□□□□□ -1.22
PTPN3-201ENST00000262539 GPR52Q9Y2T5 361 aa7.42□□□□□ -1.22
PTPN3-201ENST00000262539 SPTA1P02549 2419 aa7.42□□□□□ -1.22
PTPN3-201ENST00000262539 KIAA1671Q9BY89 1806 aa7.42□□□□□ -1.22
PTPN3-201ENST00000262539 INMT-MINDY4F8WBC2 141 aa7.42□□□□□ -1.22
PTPN3-201ENST00000262539 MKRN2OSH3BPM6 223 aa7.42□□□□□ -1.22
PTPN3-201ENST00000262539 SOCS6O14544 535 aa7.42□□□□□ -1.22
PTPN3-201ENST00000262539 KLK10O43240 276 aa7.42□□□□□ -1.22
PTPN3-201ENST00000262539 CELA2BP08218 269 aaPredicted RBP7.42□□□□□ -1.22
PTPN3-201ENST00000262539 PRKACBP22694 351 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms