RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 SLC3A1Q07837 685 aa16.98■□□□□ 0.31
COL4A3BP-201ENST00000261415 PEA15Q15121 130 aa16.98■□□□□ 0.31
COL4A3BP-201ENST00000261415 ANKRD39Q53RE8 183 aa16.98■□□□□ 0.31
COL4A3BP-201ENST00000261415 SFRP4Q6FHJ7 346 aaPredicted RBP16.98■□□□□ 0.31
COL4A3BP-201ENST00000261415 RNASE11Q8TAA1 199 aaKnown RBP16.98■□□□□ 0.31
COL4A3BP-201ENST00000261415 SMIM4Q8WVI0 70 aa16.98■□□□□ 0.31
COL4A3BP-201ENST00000261415 SPACA9Q96E40 222 aaPredicted RBP16.98■□□□□ 0.31
COL4A3BP-201ENST00000261415 SCNM1Q9BWG6 230 aa16.98■□□□□ 0.31
COL4A3BP-201ENST00000261415 TBL1XR1Q9BZK7 514 aa16.98■□□□□ 0.31
COL4A3BP-201ENST00000261415 TMPRSS5Q9H3S3 457 aa16.98■□□□□ 0.31
COL4A3BP-201ENST00000261415 A0A1B0GV90 55 aa16.98■□□□□ 0.31
COL4A3BP-201ENST00000261415 ARPC1BO15143 372 aaKnown RBP16.98■□□□□ 0.31
COL4A3BP-201ENST00000261415 SLC31A2O15432 143 aa16.98■□□□□ 0.31
COL4A3BP-201ENST00000261415 GDNFP39905 211 aa16.98■□□□□ 0.31
COL4A3BP-201ENST00000261415 RAD52P43351 418 aa16.98■□□□□ 0.31
COL4A3BP-201ENST00000261415 MLF1P58340 268 aa16.98■□□□□ 0.31
COL4A3BP-201ENST00000261415 CLN3Q13286 438 aa16.98■□□□□ 0.31
COL4A3BP-201ENST00000261415 H3F3CQ6NXT2 135 aa16.98■□□□□ 0.31
COL4A3BP-201ENST00000261415 ZNF561Q8N587 486 aa16.98■□□□□ 0.31
COL4A3BP-201ENST00000261415 FGF11Q92914 225 aa16.98■□□□□ 0.31
COL4A3BP-201ENST00000261415 UTP23Q9BRU9 249 aaKnown RBP16.98■□□□□ 0.31
COL4A3BP-201ENST00000261415 FNDC11Q9BVV2 318 aa16.98■□□□□ 0.31
COL4A3BP-201ENST00000261415 WASF3Q9UPY6 502 aa16.98■□□□□ 0.31
COL4A3BP-201ENST00000261415 UBE2QL1A1L167 161 aa16.97■□□□□ 0.31
COL4A3BP-201ENST00000261415 MCIDASD6RGH6 385 aa16.97■□□□□ 0.31
COL4A3BP-201ENST00000261415 MECP2P51608 486 aaKnown RBP16.97■□□□□ 0.31
COL4A3BP-201ENST00000261415 INSL4Q14641 139 aa16.97■□□□□ 0.31
COL4A3BP-201ENST00000261415 RNASE12Q5GAN4 147 aaKnown RBP16.97■□□□□ 0.31
COL4A3BP-201ENST00000261415 ATP1A1-AS1Q5TC04 95 aa16.97■□□□□ 0.31
COL4A3BP-201ENST00000261415 NUP54Q7Z3B4 507 aa16.97■□□□□ 0.31
COL4A3BP-201ENST00000261415 MARCH3Q86UD3 253 aa16.97■□□□□ 0.31
COL4A3BP-201ENST00000261415 SLC43A2Q8N370 569 aa16.97■□□□□ 0.31
COL4A3BP-201ENST00000261415 SIRT6Q8N6T7 355 aa16.97■□□□□ 0.31
COL4A3BP-201ENST00000261415 BRIX1Q8TDN6 353 aaKnown RBP16.97■□□□□ 0.31
COL4A3BP-201ENST00000261415 GRHL3Q8TE85 626 aa16.97■□□□□ 0.31
COL4A3BP-201ENST00000261415 EGLN1Q9GZT9 426 aa16.97■□□□□ 0.31
COL4A3BP-201ENST00000261415 NOX3Q9HBY0 568 aa16.97■□□□□ 0.31
COL4A3BP-201ENST00000261415 HRASLSQ9HDD0 168 aa16.97■□□□□ 0.31
COL4A3BP-201ENST00000261415 MAN2C1Q9NTJ4 1040 aa16.97■□□□□ 0.31
COL4A3BP-201ENST00000261415 A0A0D9SG52 128 aa16.96■□□□□ 0.31
COL4A3BP-201ENST00000261415 NUDT19A8MXV4 375 aa16.96■□□□□ 0.31
COL4A3BP-201ENST00000261415 ZNF264O43296 627 aa16.96■□□□□ 0.31
COL4A3BP-201ENST00000261415 EIF4E2O60573 245 aaKnown RBP16.96■□□□□ 0.31
COL4A3BP-201ENST00000261415 FMO6PO60774 539 aa16.96■□□□□ 0.31
COL4A3BP-201ENST00000261415 ACAA2P42765 397 aaKnown RBP16.96■□□□□ 0.31
COL4A3BP-201ENST00000261415 GIPRP48546 466 aa16.96■□□□□ 0.31
COL4A3BP-201ENST00000261415 HCCSP53701 268 aa16.96■□□□□ 0.31
COL4A3BP-201ENST00000261415 SMIM11AP58511 58 aa16.96■□□□□ 0.31
COL4A3BP-201ENST00000261415 FABP9Q0Z7S8 132 aa16.96■□□□□ 0.31
COL4A3BP-201ENST00000261415 SKP2Q13309 424 aa16.96■□□□□ 0.31
COL4A3BP-201ENST00000261415 GINS1Q14691 196 aa16.96■□□□□ 0.31
COL4A3BP-201ENST00000261415 ZNF791Q3KP31 576 aaPredicted RBP16.96■□□□□ 0.31
COL4A3BP-201ENST00000261415 ZNF550Q7Z398 422 aa16.96■□□□□ 0.31
COL4A3BP-201ENST00000261415 LHFPL3Q86UP9 236 aa16.96■□□□□ 0.31
COL4A3BP-201ENST00000261415 OR10G3Q8NGC4 313 aa16.96■□□□□ 0.31
COL4A3BP-201ENST00000261415 THEM6Q8WUY1 208 aa16.96■□□□□ 0.31
COL4A3BP-201ENST00000261415 THOC3Q96J01 351 aaKnown RBP16.96■□□□□ 0.31
COL4A3BP-201ENST00000261415 CNTRLQ7Z7A1 2325 aa16.96■□□□□ 0.31
COL4A3BP-201ENST00000261415 E9PI62 339 aa16.96■□□□□ 0.31
COL4A3BP-201ENST00000261415 TXNL1O43396 289 aa16.96■□□□□ 0.31
COL4A3BP-201ENST00000261415 OIP5O43482 229 aa16.96■□□□□ 0.31
COL4A3BP-201ENST00000261415 SAGP10523 405 aaPredicted RBP16.96■□□□□ 0.31
COL4A3BP-201ENST00000261415 MUC1P15941 1255 aaPredicted RBP16.96■□□□□ 0.31
COL4A3BP-201ENST00000261415 ELAVL4P26378 380 aaKnown RBP16.96■□□□□ 0.31
COL4A3BP-201ENST00000261415 SSR4P51571 173 aa16.96■□□□□ 0.31
COL4A3BP-201ENST00000261415 RAB2AP61019 212 aa16.96■□□□□ 0.31
COL4A3BP-201ENST00000261415 C9orf152Q5JTZ5 239 aa16.96■□□□□ 0.31
COL4A3BP-201ENST00000261415 PGBD2Q6P3X8 592 aa16.96■□□□□ 0.31
COL4A3BP-201ENST00000261415 OPN5Q6U736 354 aa16.96■□□□□ 0.31
COL4A3BP-201ENST00000261415 CD300LDQ6UXZ3 194 aa16.96■□□□□ 0.31
COL4A3BP-201ENST00000261415 PSMF1Q92530 271 aa16.96■□□□□ 0.31
COL4A3BP-201ENST00000261415 FER1L6-AS2Q96M78 137 aa16.96■□□□□ 0.31
COL4A3BP-201ENST00000261415 A0A1W2PRQ8 180 aa16.95■□□□□ 0.3
COL4A3BP-201ENST00000261415 F5H5P2 479 aa16.95■□□□□ 0.3
COL4A3BP-201ENST00000261415 KHDRBS3O75525 346 aaKnown RBP16.95■□□□□ 0.3
COL4A3BP-201ENST00000261415 MNDAP41218 407 aa16.95■□□□□ 0.3
COL4A3BP-201ENST00000261415 AIMP2Q13155 320 aaKnown RBP16.95■□□□□ 0.3
COL4A3BP-201ENST00000261415 MELKQ14680 651 aa16.95■□□□□ 0.3
COL4A3BP-201ENST00000261415 JMJD6Q6NYC1 403 aaPredicted RBP16.95■□□□□ 0.3
COL4A3BP-201ENST00000261415 CBLN3Q6UW01 205 aa16.95■□□□□ 0.3
COL4A3BP-201ENST00000261415 IQCF1Q8N6M8 205 aa16.95■□□□□ 0.3
COL4A3BP-201ENST00000261415 STK35Q8TDR2 534 aa16.95■□□□□ 0.3
COL4A3BP-201ENST00000261415 RNF138Q8WVD3 245 aa16.95■□□□□ 0.3
COL4A3BP-201ENST00000261415 THAP4Q8WY91 577 aa16.95■□□□□ 0.3
COL4A3BP-201ENST00000261415 ZNF559Q9BR84 538 aa16.95■□□□□ 0.3
COL4A3BP-201ENST00000261415 SEC11CQ9BY50 192 aa16.95■□□□□ 0.3
COL4A3BP-201ENST00000261415 PLEKHA1Q9HB21 404 aa16.95■□□□□ 0.3
COL4A3BP-201ENST00000261415 PPP4R1LQ9P1A2 415 aa16.95■□□□□ 0.3
COL4A3BP-201ENST00000261415 OR14I1A6ND48 311 aa16.95■□□□□ 0.3
COL4A3BP-201ENST00000261415 COLCA2A8K830 154 aa16.95■□□□□ 0.3
COL4A3BP-201ENST00000261415 ADAM10O14672 748 aa16.95■□□□□ 0.3
COL4A3BP-201ENST00000261415 RNF13O43567 381 aa16.95■□□□□ 0.3
COL4A3BP-201ENST00000261415 THY1P04216 161 aa16.95■□□□□ 0.3
COL4A3BP-201ENST00000261415 ABOP16442 354 aa16.95■□□□□ 0.3
COL4A3BP-201ENST00000261415 ADCYAP1P18509 176 aa16.95■□□□□ 0.3
COL4A3BP-201ENST00000261415 WT1P19544 449 aaPredicted RBP16.95■□□□□ 0.3
COL4A3BP-201ENST00000261415 NOS3P29474 1203 aa16.95■□□□□ 0.3
COL4A3BP-201ENST00000261415 CDK5Q00535 292 aa16.95■□□□□ 0.3
COL4A3BP-201ENST00000261415 ZNF117Q03924 483 aa16.95■□□□□ 0.3
COL4A3BP-201ENST00000261415 ST3GAL3Q11203 375 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms