RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 TSPAN7P41732 249 aa16.66■□□□□ 0.26
PDLIM4-201ENST00000253754 RAD52P43351 418 aa16.66■□□□□ 0.26
PDLIM4-201ENST00000253754 RAG2P55895 527 aa16.66■□□□□ 0.26
PDLIM4-201ENST00000253754 SPOCK1Q08629 439 aa16.66■□□□□ 0.26
PDLIM4-201ENST00000253754 SLC25A53Q5H9E4 307 aa16.66■□□□□ 0.26
PDLIM4-201ENST00000253754 DCAF12Q5T6F0 453 aa16.66■□□□□ 0.26
PDLIM4-201ENST00000253754 CARD17Q5XLA6 110 aa16.66■□□□□ 0.26
PDLIM4-201ENST00000253754 NHLRC1Q6VVB1 395 aa16.66■□□□□ 0.26
PDLIM4-201ENST00000253754 RAB11FIP2Q7L804 512 aa16.66■□□□□ 0.26
PDLIM4-201ENST00000253754 GRPEL2Q8TAA5 225 aa16.66■□□□□ 0.26
PDLIM4-201ENST00000253754 ELP5Q8TE02 316 aa16.66■□□□□ 0.26
PDLIM4-201ENST00000253754 SEC22CQ9BRL7 303 aa16.66■□□□□ 0.26
PDLIM4-201ENST00000253754 PARD6AQ9NPB6 346 aa16.66■□□□□ 0.26
PDLIM4-201ENST00000253754 STMN3Q9NZ72 180 aa16.66■□□□□ 0.26
PDLIM4-201ENST00000253754 CHCHD2Q9Y6H1 151 aaPredicted RBP16.66■□□□□ 0.26
PDLIM4-201ENST00000253754 CNOT1A5YKK6 2376 aaKnown RBP16.66■□□□□ 0.26
PDLIM4-201ENST00000253754 TRAV18A0A075B6X5 111 aa16.65■□□□□ 0.26
PDLIM4-201ENST00000253754 CIB4A0PJX0 185 aa16.65■□□□□ 0.26
PDLIM4-201ENST00000253754 DCDC2BA2VCK2 349 aa16.65■□□□□ 0.26
PDLIM4-201ENST00000253754 IGFBP3P17936 291 aaPredicted RBP16.65■□□□□ 0.26
PDLIM4-201ENST00000253754 P2RY4P51582 365 aa16.65■□□□□ 0.26
PDLIM4-201ENST00000253754 MRPS10P82664 201 aaKnown RBP16.65■□□□□ 0.26
PDLIM4-201ENST00000253754 MFAP5Q13361 173 aa16.65■□□□□ 0.26
PDLIM4-201ENST00000253754 GLYATL3Q5SZD4 288 aa16.65■□□□□ 0.26
PDLIM4-201ENST00000253754 OLFML2AQ68BL7 652 aa16.65■□□□□ 0.26
PDLIM4-201ENST00000253754 FAM166AQ6J272 317 aa16.65■□□□□ 0.26
PDLIM4-201ENST00000253754 C3orf33Q6P1S2 294 aa16.65■□□□□ 0.26
PDLIM4-201ENST00000253754 OR4D10Q8NGI6 311 aa16.65■□□□□ 0.26
PDLIM4-201ENST00000253754 SLC25A28Q96A46 364 aa16.65■□□□□ 0.26
PDLIM4-201ENST00000253754 HYLS1Q96M11 299 aa16.65■□□□□ 0.26
PDLIM4-201ENST00000253754 GON7Q9BXV9 100 aa16.65■□□□□ 0.26
PDLIM4-201ENST00000253754 ACTR6Q9GZN1 396 aa16.65■□□□□ 0.26
PDLIM4-201ENST00000253754 SDHAF3Q9NRP4 125 aa16.65■□□□□ 0.26
PDLIM4-201ENST00000253754 CKLFQ9UBR5 152 aa16.65■□□□□ 0.26
PDLIM4-201ENST00000253754 CDV3Q9UKY7 258 aaKnown RBP16.65■□□□□ 0.26
PDLIM4-201ENST00000253754 MGAT4AQ9UM21 535 aa16.65■□□□□ 0.26
PDLIM4-201ENST00000253754 RPH3AQ9Y2J0 694 aaPredicted RBP16.65■□□□□ 0.26
PDLIM4-201ENST00000253754 MRPS18BQ9Y676 258 aaKnown RBP16.65■□□□□ 0.26
PDLIM4-201ENST00000253754 LOC100289279A0A1B0GTE1 492 aa16.65■□□□□ 0.26
PDLIM4-201ENST00000253754 A0A1W2PNV4 684 aa16.65■□□□□ 0.26
PDLIM4-201ENST00000253754 A0A1W2PQ72 361 aa16.65■□□□□ 0.26
PDLIM4-201ENST00000253754 NPIPB13A6NJU9 1138 aa16.65■□□□□ 0.26
PDLIM4-201ENST00000253754 NPIPB4C9JG80 1138 aa16.65■□□□□ 0.26
PDLIM4-201ENST00000253754 TSC22D2O75157 780 aa16.65■□□□□ 0.26
PDLIM4-201ENST00000253754 H2BFMP0C1H6 154 aa16.65■□□□□ 0.26
PDLIM4-201ENST00000253754 SULT1A3P0DMM9 295 aa16.65■□□□□ 0.26
PDLIM4-201ENST00000253754 SULT1A4P0DMN0 295 aa16.65■□□□□ 0.26
PDLIM4-201ENST00000253754 ANXA7P20073 488 aaKnown RBP16.65■□□□□ 0.26
PDLIM4-201ENST00000253754 PCGF3Q3KNV8 242 aa16.65■□□□□ 0.26
PDLIM4-201ENST00000253754 ELFN2Q5R3F8 820 aa16.65■□□□□ 0.26
PDLIM4-201ENST00000253754 SLC25A25Q6KCM7 469 aa16.65■□□□□ 0.26
PDLIM4-201ENST00000253754 DNM1P46Q6ZS02 220 aa16.65■□□□□ 0.26
PDLIM4-201ENST00000253754 CDC6Q99741 560 aa16.65■□□□□ 0.26
PDLIM4-201ENST00000253754 TRAF4Q9BUZ4 470 aaPredicted RBP16.65■□□□□ 0.26
PDLIM4-201ENST00000253754 MRPL13Q9BYD1 178 aaKnown RBP16.65■□□□□ 0.26
PDLIM4-201ENST00000253754 WDR54Q9H977 334 aa16.65■□□□□ 0.26
PDLIM4-201ENST00000253754 NOX3Q9HBY0 568 aa16.65■□□□□ 0.26
PDLIM4-201ENST00000253754 HHLA2Q9UM44 414 aa16.65■□□□□ 0.26
PDLIM4-201ENST00000253754 PTRH2Q9Y3E5 179 aaKnown RBP16.65■□□□□ 0.26
PDLIM4-201ENST00000253754 A0A1W2PPL8 197 aa16.64■□□□□ 0.25
PDLIM4-201ENST00000253754 NAP1L6A6NFF2 107 aa16.64■□□□□ 0.25
PDLIM4-201ENST00000253754 AQP8O94778 261 aa16.64■□□□□ 0.25
PDLIM4-201ENST00000253754 CD2P06729 351 aa16.64■□□□□ 0.25
PDLIM4-201ENST00000253754 CFPP27918 469 aa16.64■□□□□ 0.25
PDLIM4-201ENST00000253754 CDAP32320 146 aa16.64■□□□□ 0.25
PDLIM4-201ENST00000253754 DNASE1L1P49184 302 aa16.64■□□□□ 0.25
PDLIM4-201ENST00000253754 SELENOPP49908 381 aa16.64■□□□□ 0.25
PDLIM4-201ENST00000253754 FAM198BQ6UWH4 519 aa16.64■□□□□ 0.25
PDLIM4-201ENST00000253754 UEVLDQ8IX04 471 aa16.64■□□□□ 0.25
PDLIM4-201ENST00000253754 OR4K17Q8NGC6 315 aa16.64■□□□□ 0.25
PDLIM4-201ENST00000253754 OR10S1Q8NGN2 331 aa16.64■□□□□ 0.25
PDLIM4-201ENST00000253754 RNF133Q8WVZ7 376 aa16.64■□□□□ 0.25
PDLIM4-201ENST00000253754 THRSPQ92748 146 aa16.64■□□□□ 0.25
PDLIM4-201ENST00000253754 ATG5Q9H1Y0 275 aa16.64■□□□□ 0.25
PDLIM4-201ENST00000253754 PISDQ9UG56 409 aa16.64■□□□□ 0.25
PDLIM4-201ENST00000253754 C9J4A7 227 aa16.63■□□□□ 0.25
PDLIM4-201ENST00000253754 SCAND1P57086 179 aa16.63■□□□□ 0.25
PDLIM4-201ENST00000253754 GALK2Q01415 458 aa16.63■□□□□ 0.25
PDLIM4-201ENST00000253754 FGD2Q7Z6J4 655 aa16.63■□□□□ 0.25
PDLIM4-201ENST00000253754 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.63■□□□□ 0.25
PDLIM4-201ENST00000253754 SLAMF6Q96DU3 332 aa16.63■□□□□ 0.25
PDLIM4-201ENST00000253754 KLHL13Q9P2N7 655 aa16.63■□□□□ 0.25
PDLIM4-201ENST00000253754 NXT1Q9UKK6 140 aaKnown RBP16.63■□□□□ 0.25
PDLIM4-201ENST00000253754 ING4Q9UNL4 249 aa16.63■□□□□ 0.25
PDLIM4-201ENST00000253754 FAM186AA6NE01 2351 aa16.63■□□□□ 0.25
PDLIM4-201ENST00000253754 AHCTF1Q8WYP5 2266 aa16.63■□□□□ 0.25
PDLIM4-201ENST00000253754 CEP250Q9BV73 2442 aa16.63■□□□□ 0.25
PDLIM4-201ENST00000253754 G3V3Y1 287 aa16.63■□□□□ 0.25
PDLIM4-201ENST00000253754 DLL1O00548 723 aa16.63■□□□□ 0.25
PDLIM4-201ENST00000253754 STK17BO94768 372 aa16.63■□□□□ 0.25
PDLIM4-201ENST00000253754 CLRN1P58418 232 aa16.63■□□□□ 0.25
PDLIM4-201ENST00000253754 TMEM176BQ3YBM2 270 aaPredicted RBP16.63■□□□□ 0.25
PDLIM4-201ENST00000253754 OR10K2Q6IF99 312 aa16.63■□□□□ 0.25
PDLIM4-201ENST00000253754 DHRS13Q6UX07 377 aa16.63■□□□□ 0.25
PDLIM4-201ENST00000253754 CFAP77Q6ZQR2 320 aa16.63■□□□□ 0.25
PDLIM4-201ENST00000253754 PIAS4Q8N2W9 510 aaPredicted RBP16.63■□□□□ 0.25
PDLIM4-201ENST00000253754 OR10H5Q8NGA6 315 aa16.63■□□□□ 0.25
PDLIM4-201ENST00000253754 ZNF431Q8TF32 576 aaPredicted RBP16.63■□□□□ 0.25
PDLIM4-201ENST00000253754 SEC61A2Q9H9S3 476 aa16.63■□□□□ 0.25
PDLIM4-201ENST00000253754 FANCFQ9NPI8 374 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms