RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 AHCTF1Q8WYP5 2266 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 TRAV14DV4A0A0A6YYC5 116 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 OR6C76A6NM76 312 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 LINC01565O15544 149 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 UBBP0CG47 229 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 UBCP0CG48 685 aaKnown RBP10.78□□□□□ -0.68
USHBP1-201ENST00000252597 RAB3AP20336 220 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 SERPINF1P36955 418 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 PLEKHN1Q494U1 663 aaPredicted RBP10.78□□□□□ -0.68
USHBP1-201ENST00000252597 VWA2Q5GFL6 755 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 AWAT2Q6E213 333 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 C15orf40Q8WUR7 153 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 ABHD6Q9BV23 337 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 RTN4RQ9BZR6 473 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 VSX1Q9NZR4 365 aaPredicted RBP10.78□□□□□ -0.68
USHBP1-201ENST00000252597 EMC3Q9P0I2 261 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 TMEM14AQ9Y6G1 99 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 CPED1A4D0V7 1026 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 A8MXK9 166 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 H2BFMP0C1H6 154 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 HNRNPA2B1P22626 353 aaKnown RBP10.78□□□□□ -0.68
USHBP1-201ENST00000252597 MST1P26927 711 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 AGTR1P30556 359 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 GFERP55789 205 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 RASGEF1BQ0VAM2 473 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 NKAPLQ5M9Q1 402 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 TMEM151BQ8IW70 566 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 CCDC36Q8IYA8 594 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 OR10H5Q8NGA6 315 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 PHOSPHO2Q8TCD6 241 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 TPSD1Q9BZJ3 242 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 SEMA6CQ9H3T2 930 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 SLC22A11Q9NSA0 550 aa10.78□□□□□ -0.68
USHBP1-201ENST00000252597 LOC107986453A0A1B0GWG9 222 aa10.77□□□□□ -0.69
USHBP1-201ENST00000252597 METTL21EPA6NDL7 271 aa10.77□□□□□ -0.69
USHBP1-201ENST00000252597 ARPC3O15145 178 aa10.77□□□□□ -0.69
USHBP1-201ENST00000252597 PMS2P2O95744 297 aa10.77□□□□□ -0.69
USHBP1-201ENST00000252597 TNFP01375 233 aa10.77□□□□□ -0.69
USHBP1-201ENST00000252597 S100A6P06703 90 aa10.77□□□□□ -0.69
USHBP1-201ENST00000252597 IL11P20809 199 aa10.77□□□□□ -0.69
USHBP1-201ENST00000252597 SLC17A1Q14916 467 aa10.77□□□□□ -0.69
USHBP1-201ENST00000252597 EBPQ15125 230 aaKnown RBP10.77□□□□□ -0.69
USHBP1-201ENST00000252597 SWI5Q1ZZU3 235 aa10.77□□□□□ -0.69
USHBP1-201ENST00000252597 RSPO4Q2I0M5 234 aaPredicted RBP10.77□□□□□ -0.69
USHBP1-201ENST00000252597 SLC35D3Q5M8T2 416 aa10.77□□□□□ -0.69
USHBP1-201ENST00000252597 KCTD18Q6PI47 426 aaPredicted RBP10.77□□□□□ -0.69
USHBP1-201ENST00000252597 CLEC1AQ8NC01 280 aa10.77□□□□□ -0.69
USHBP1-201ENST00000252597 FOXRED1Q96CU9 486 aaPredicted RBP10.77□□□□□ -0.69
USHBP1-201ENST00000252597 ZNF578Q96N58 590 aaPredicted RBP10.77□□□□□ -0.69
USHBP1-201ENST00000252597 ZNF587Q96SQ5 575 aaPredicted RBP10.77□□□□□ -0.69
USHBP1-201ENST00000252597 PHB2Q99623 299 aa10.77□□□□□ -0.69
USHBP1-201ENST00000252597 PLEKHA1Q9HB21 404 aa10.77□□□□□ -0.69
USHBP1-201ENST00000252597 CHMP1AQ9HD42 196 aaPredicted RBP10.77□□□□□ -0.69
USHBP1-201ENST00000252597 ICAM5Q9UMF0 924 aa10.77□□□□□ -0.69
USHBP1-201ENST00000252597 AUP1Q9Y679 476 aa10.77□□□□□ -0.69
USHBP1-201ENST00000252597 CACNA1GO43497 2377 aa10.77□□□□□ -0.69
USHBP1-201ENST00000252597 EFCAB7A8K855 629 aa10.77□□□□□ -0.69
USHBP1-201ENST00000252597 DNASE2O00115 360 aaPredicted RBP10.77□□□□□ -0.69
USHBP1-201ENST00000252597 HPP00738 406 aa10.77□□□□□ -0.69
USHBP1-201ENST00000252597 HCKP08631 526 aa10.77□□□□□ -0.69
USHBP1-201ENST00000252597 GP1BBP13224 206 aa10.77□□□□□ -0.69
USHBP1-201ENST00000252597 CD96P40200 585 aa10.77□□□□□ -0.69
USHBP1-201ENST00000252597 ID4P47928 161 aa10.77□□□□□ -0.69
USHBP1-201ENST00000252597 RPS27AP62979 156 aaKnown RBP10.77□□□□□ -0.69
USHBP1-201ENST00000252597 UBA52P62987 128 aaKnown RBP10.77□□□□□ -0.69
USHBP1-201ENST00000252597 POU3F1Q03052 451 aaPredicted RBP10.77□□□□□ -0.69
USHBP1-201ENST00000252597 CHAF1BQ13112 559 aa10.77□□□□□ -0.69
USHBP1-201ENST00000252597 NSDHLQ15738 373 aa10.77□□□□□ -0.69
USHBP1-201ENST00000252597 C11orf87Q6NUJ2 197 aa10.77□□□□□ -0.69
USHBP1-201ENST00000252597 OR4D6Q8NGJ1 314 aa10.77□□□□□ -0.69
USHBP1-201ENST00000252597 GAREM1Q9H706 876 aa10.77□□□□□ -0.69
USHBP1-201ENST00000252597 PTGES2Q9H7Z7 377 aa10.77□□□□□ -0.69
USHBP1-201ENST00000252597 KLF15Q9UIH9 416 aa10.77□□□□□ -0.69
USHBP1-201ENST00000252597 HMSDA8MTL9 139 aa10.76□□□□□ -0.69
USHBP1-201ENST00000252597 SULT1C2O00338 296 aa10.76□□□□□ -0.69
USHBP1-201ENST00000252597 SLC17A2O00624 439 aa10.76□□□□□ -0.69
USHBP1-201ENST00000252597 ABCD4O14678 606 aa10.76□□□□□ -0.69
USHBP1-201ENST00000252597 MGMTP16455 207 aa10.76□□□□□ -0.69
USHBP1-201ENST00000252597 AKT2P31751 481 aa10.76□□□□□ -0.69
USHBP1-201ENST00000252597 EGR4Q05215 589 aa10.76□□□□□ -0.69
USHBP1-201ENST00000252597 PLCXD2Q0VAA5 305 aa10.76□□□□□ -0.69
USHBP1-201ENST00000252597 TGIF1Q15583 401 aa10.76□□□□□ -0.69
USHBP1-201ENST00000252597 OVCH2Q7RTZ1 564 aa10.76□□□□□ -0.69
USHBP1-201ENST00000252597 BHLHE23Q8NDY6 225 aa10.76□□□□□ -0.69
USHBP1-201ENST00000252597 OR2I1PQ8NGU4 316 aa10.76□□□□□ -0.69
USHBP1-201ENST00000252597 TM4SF19Q96DZ7 209 aa10.76□□□□□ -0.69
USHBP1-201ENST00000252597 DNTTIP1Q9H147 329 aa10.76□□□□□ -0.69
USHBP1-201ENST00000252597 KLK13Q9UKR3 277 aa10.76□□□□□ -0.69
USHBP1-201ENST00000252597 VSIG4Q9Y279 399 aa10.76□□□□□ -0.69
USHBP1-201ENST00000252597 LRP12Q9Y561 859 aa10.76□□□□□ -0.69
USHBP1-201ENST00000252597 A0A1W2PP11 408 aa10.76□□□□□ -0.69
USHBP1-201ENST00000252597 PLRG1O43660 514 aaKnown RBP10.76□□□□□ -0.69
USHBP1-201ENST00000252597 THEGLP0DJG4 465 aa10.76□□□□□ -0.69
USHBP1-201ENST00000252597 OR3A2P47893 321 aa10.76□□□□□ -0.69
USHBP1-201ENST00000252597 KRBOX4Q5JUW0 171 aa10.76□□□□□ -0.69
USHBP1-201ENST00000252597 TFAP2EQ6VUC0 442 aa10.76□□□□□ -0.69
USHBP1-201ENST00000252597 ETV3LQ6ZN32 361 aa10.76□□□□□ -0.69
USHBP1-201ENST00000252597 BATF2Q8N1L9 274 aa10.76□□□□□ -0.69
USHBP1-201ENST00000252597 EID2Q8N6I1 236 aa10.76□□□□□ -0.69
USHBP1-201ENST00000252597 OTOSQ8NHW6 89 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms