RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 NTMQ9P121 344 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 ZGRF1Q86YA3 2104 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 MCRIP1C9JLW8 97 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 PLPP2O43688 288 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 EPHA1P21709 976 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 CD38P28907 300 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 YPEL5P62699 121 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 GTF3C1Q12789 2109 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 PLA2G7Q13093 441 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 SLC25A30Q5SVS4 291 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 AKR1C8PQ5T2L2 129 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 PAPD4Q6PIY7 484 aaKnown RBP4.18□□□□□ -1.74
VPS13C-201ENST00000249837 MOB3CQ70IA8 216 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 KIAA0907Q7Z7F0 614 aaPredicted RBP4.18□□□□□ -1.74
VPS13C-201ENST00000249837 SGPP2Q8IWX5 399 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 MUC20Q8N307 709 aaPredicted RBP4.18□□□□□ -1.74
VPS13C-201ENST00000249837 CCDC74AQ96AQ1 378 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 ZNF285Q96NJ3 590 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 MCOLN1Q9GZU1 580 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 ATPIF1Q9UII2 106 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 FBXO4Q9UKT5 387 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 A0A087WV62 115 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 LILRB5O75023 590 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 CFDP00746 253 aaPredicted RBP4.18□□□□□ -1.74
VPS13C-201ENST00000249837 RNLSQ5VYX0 342 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 ACOT7LQ6ZUV0 252 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 A0A087WUJ7 227 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 BRINP1O60477 761 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 CBX7O95931 251 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 ZGLP1P0C6A0 271 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 LIMS1P48059 325 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 HNRNPKP61978 463 aaKnown RBP eCLIP4.18□□□□□ -1.74
VPS13C-201ENST00000249837 USF2Q15853 346 aaPredicted RBP4.18□□□□□ -1.74
VPS13C-201ENST00000249837 FBXO46Q6PJ61 603 aaPredicted RBP4.18□□□□□ -1.74
VPS13C-201ENST00000249837 CHST6Q9GZX3 395 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 CHST11Q9NPF2 352 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 ABI3Q9P2A4 366 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 ZNF223Q9UK11 482 aaPredicted RBP4.18□□□□□ -1.74
VPS13C-201ENST00000249837 BHLHE40O14503 412 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 TNFRSF10CO14798 259 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 HOXB9P17482 250 aaPredicted RBP4.18□□□□□ -1.74
VPS13C-201ENST00000249837 GFERP55789 205 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 KLF9Q13886 244 aaPredicted RBP4.18□□□□□ -1.74
VPS13C-201ENST00000249837 EXOSC6Q5RKV6 272 aaKnown RBP4.18□□□□□ -1.74
VPS13C-201ENST00000249837 GPR157Q5UAW9 335 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 MRM1Q6IN84 353 aaKnown RBP4.18□□□□□ -1.74
VPS13C-201ENST00000249837 MDGA2Q7Z553 956 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 OR4S1Q8NGB4 309 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 OR14L1PQ8NHC6 308 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 LHX9Q9NQ69 397 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 PRMT8Q9NR22 394 aaPredicted RBP4.18□□□□□ -1.74
VPS13C-201ENST00000249837 DNAJB12Q9NXW2 375 aaKnown RBP4.18□□□□□ -1.74
VPS13C-201ENST00000249837 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 FASLGP48023 281 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 DCAF7P61962 342 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 OR11H7Q8NGC8 314 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 MARCH1Q8TCQ1 289 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 NSA2O95478 260 aaKnown RBP4.18□□□□□ -1.74
VPS13C-201ENST00000249837 VSIG10L2P0DP72 767 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 FCGR2AP12318 317 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 CLINT1Q14677 625 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 C16orf47Q6ZP98 133 aaPredicted RBP4.18□□□□□ -1.74
VPS13C-201ENST00000249837 GRAMD2AQ8IUY3 354 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 IL17RCQ8NAC3 791 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 SUMF2Q8NBJ7 301 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 OR11H4Q8NGC9 324 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 CLCC1Q96S66 551 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 DNTTIP1Q9H147 329 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 MTFP1Q9UDX5 166 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 RARRES3Q9UL19 164 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 SCML1Q9UN30 329 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 A0A0B4J2E0 115 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 A0A1B0GX12 115 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 LINC00862A6NCI5 91 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 RAD51DO75771 328 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 DBHP09172 617 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 RPL27P61353 136 aaKnown RBP4.18□□□□□ -1.74
VPS13C-201ENST00000249837 ZNF74Q16587 644 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 DMKNQ6E0U4 476 aaPredicted RBP4.18□□□□□ -1.74
VPS13C-201ENST00000249837 RAB11FIP2Q7L804 512 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 KCNRGQ8N5I3 272 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 SUMF1Q8NBK3 374 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 TMEM52Q8NDY8 209 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 BMFQ96LC9 184 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 TXNIPQ9H3M7 391 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 DENND4CQ5VZ89 1909 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 IGKV1-8A0A0C4DH67 115 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 LINC01565O15544 149 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 IGHG1P01857 330 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 SULT1A3P0DMM9 295 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 SULT1A4P0DMN0 295 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 NR2C1P13056 603 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 OPRM1P35372 400 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 WDR38Q5JTN6 314 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 BEND4Q6ZU67 534 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 FAM122BQ7Z309 247 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 SPTSSAQ969W0 71 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 MRGPRX1Q96LB2 322 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 CMSS1Q9BQ75 279 aaKnown RBP4.18□□□□□ -1.74
VPS13C-201ENST00000249837 PBDC1Q9BVG4 233 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms