RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 PLSCR3Q9NRY6 295 aa7.71□□□□□ -1.18
VPS4B-201ENST00000238497 TAS2R5Q9NYW4 299 aa7.71□□□□□ -1.18
VPS4B-201ENST00000238497 FBXL2Q9UKC9 423 aa7.71□□□□□ -1.18
VPS4B-201ENST00000238497 FBXL3Q9UKT7 428 aa7.71□□□□□ -1.18
VPS4B-201ENST00000238497 ZNF281Q9Y2X9 895 aa7.71□□□□□ -1.18
VPS4B-201ENST00000238497 TRIM3O75382 744 aaPredicted RBP7.7□□□□□ -1.18
VPS4B-201ENST00000238497 SLC2A5P22732 501 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 PTGS2P35354 604 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 PNLIPRP2P54317 469 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 SGCAQ16586 387 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 ATAD3CQ5T2N8 411 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 DMKNQ6E0U4 476 aaPredicted RBP7.7□□□□□ -1.18
VPS4B-201ENST00000238497 LINC00299Q6ZSB3 139 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 CHMP1BQ7LBR1 199 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 FGD2Q7Z6J4 655 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 OR51D1Q8NGF3 324 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 OR5M9Q8NGP3 310 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 PMM1Q92871 262 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 GPR137Q96N19 417 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 FRRS1LQ9P0K9 344 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 KLK11Q9UBX7 282 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 MRM2Q9UI43 246 aaKnown RBP7.7□□□□□ -1.18
VPS4B-201ENST00000238497 A0A0G2JMM0 328 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 A0A1W2PPB8 328 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 A0A1W2PRS3 328 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 KIR3DP1A8MWS1 328 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 SSNA1O43805 119 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 TSPAN2O60636 221 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 EPXP11678 715 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 HTR3AP46098 478 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 DCAF7P61962 342 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 PUDPQ08623 228 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 C17orf67Q0P5P2 114 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 SNTB2Q13425 540 aaKnown RBP7.7□□□□□ -1.18
VPS4B-201ENST00000238497 ZNF787Q6DD87 383 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 ZNF627Q7L945 461 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 GRINAQ7Z429 371 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 DCXRQ7Z4W1 244 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 SYNPRQ8TBG9 265 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 NPRL2Q8WTW4 380 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 MICU1Q9BPX6 476 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 EMC7Q9NPA0 242 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 CGGBP1Q9UFW8 167 aaPredicted RBP7.7□□□□□ -1.18
VPS4B-201ENST00000238497 ST6GALNAC2Q9UJ37 374 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 B9D1Q9UPM9 204 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 HIF3AQ9Y2N7 669 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 UGT2A1Q9Y4X1 527 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 NOTOA8MTQ0 251 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 FAM47E-STBD1D6RA91 191 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 RLN1P04808 185 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 TMIGD3P0DMS9 266 aaPredicted RBP7.7□□□□□ -1.18
VPS4B-201ENST00000238497 CCL3P10147 92 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 KLK2P20151 261 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 TDGF1P3P51864 188 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 RPL27P61353 136 aaKnown RBP7.7□□□□□ -1.18
VPS4B-201ENST00000238497 ALKBH1Q13686 389 aaKnown RBP7.7□□□□□ -1.18
VPS4B-201ENST00000238497 KRTCAP3Q53RY4 240 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 SLC22A10Q63ZE4 541 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 LINC00114Q6XXX2 140 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 CMTM4Q8IZR5 234 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 SCMH1Q96GD3 660 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 RNF170Q96K19 258 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 CACNG6Q9BXT2 260 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 OR10A4Q9H209 315 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 FLVCR2Q9UPI3 526 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 HRH3Q9Y5N1 445 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 ALG5Q9Y673 324 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 V9GY05 133 aa7.7□□□□□ -1.18
VPS4B-201ENST00000238497 PRSS37A4D1T9 235 aa7.69□□□□□ -1.18
VPS4B-201ENST00000238497 ARPC3O15145 178 aa7.69□□□□□ -1.18
VPS4B-201ENST00000238497 ASAH2BP0C7U1 165 aa7.69□□□□□ -1.18
VPS4B-201ENST00000238497 GPR176Q14439 515 aa7.69□□□□□ -1.18
VPS4B-201ENST00000238497 TMEM69Q5SWH9 247 aa7.69□□□□□ -1.18
VPS4B-201ENST00000238497 C6orf183Q5T699 404 aa7.69□□□□□ -1.18
VPS4B-201ENST00000238497 LINC01590Q5TEZ4 76 aa7.69□□□□□ -1.18
VPS4B-201ENST00000238497 RNLSQ5VYX0 342 aa7.69□□□□□ -1.18
VPS4B-201ENST00000238497 CD200R1LQ6Q8B3 271 aa7.69□□□□□ -1.18
VPS4B-201ENST00000238497 SLC16A9Q7RTY1 509 aa7.69□□□□□ -1.18
VPS4B-201ENST00000238497 CD163Q86VB7 1156 aa7.69□□□□□ -1.18
VPS4B-201ENST00000238497 LRRC28Q86X40 367 aaPredicted RBP7.69□□□□□ -1.18
VPS4B-201ENST00000238497 SIAH3Q8IW03 269 aa7.69□□□□□ -1.18
VPS4B-201ENST00000238497 CCDC120Q96HB5 630 aa7.69□□□□□ -1.18
VPS4B-201ENST00000238497 SGCZQ96LD1 299 aa7.69□□□□□ -1.18
VPS4B-201ENST00000238497 ISYNA1Q9NPH2 558 aa7.69□□□□□ -1.18
VPS4B-201ENST00000238497 INPP5EQ9NRR6 644 aa7.69□□□□□ -1.18
VPS4B-201ENST00000238497 DEPPQ9NTK1 212 aa7.69□□□□□ -1.18
VPS4B-201ENST00000238497 RCE1Q9Y256 329 aa7.69□□□□□ -1.18
VPS4B-201ENST00000238497 NOX1Q9Y5S8 564 aa7.69□□□□□ -1.18
VPS4B-201ENST00000238497 TRAV8-7A0A075B6U6 113 aa7.69□□□□□ -1.18
VPS4B-201ENST00000238497 PIN1P1O15428 100 aa7.69□□□□□ -1.18
VPS4B-201ENST00000238497 WNT11O96014 354 aa7.69□□□□□ -1.18
VPS4B-201ENST00000238497 GUCA1AP43080 201 aaPredicted RBP7.69□□□□□ -1.18
VPS4B-201ENST00000238497 CLRN1P58418 232 aa7.69□□□□□ -1.18
VPS4B-201ENST00000238497 GLO1Q04760 184 aa7.69□□□□□ -1.18
VPS4B-201ENST00000238497 EXOSC6Q5RKV6 272 aaKnown RBP7.69□□□□□ -1.18
VPS4B-201ENST00000238497 ZNF324BQ6AW86 544 aaPredicted RBP7.69□□□□□ -1.18
VPS4B-201ENST00000238497 ZNF585AQ6P3V2 769 aa7.69□□□□□ -1.18
VPS4B-201ENST00000238497 ZNF227Q86WZ6 799 aa7.69□□□□□ -1.18
VPS4B-201ENST00000238497 LRRC18Q8N456 261 aa7.69□□□□□ -1.18
VPS4B-201ENST00000238497 CHST4Q8NCG5 386 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms