RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 COG8Q96MW5 612 aa9.78□□□□□ -0.84
TNFAIP3-201ENST00000237289 CAB39Q9Y376 341 aaPredicted RBP9.78□□□□□ -0.84
TNFAIP3-201ENST00000237289 EML6Q6ZMW3 1958 aa9.77□□□□□ -0.84
TNFAIP3-201ENST00000237289 USP34Q70CQ2 3546 aa9.77□□□□□ -0.84
TNFAIP3-201ENST00000237289 PLSCR5A0PG75 271 aa9.77□□□□□ -0.84
TNFAIP3-201ENST00000237289 OR5H1A6NKK0 313 aa9.77□□□□□ -0.84
TNFAIP3-201ENST00000237289 ERCC1P07992 297 aaPredicted RBP9.77□□□□□ -0.84
TNFAIP3-201ENST00000237289 APEX1P27695 318 aaKnown RBP9.77□□□□□ -0.84
TNFAIP3-201ENST00000237289 PSMB10P40306 273 aa9.77□□□□□ -0.84
TNFAIP3-201ENST00000237289 PPP3R1P63098 170 aa9.77□□□□□ -0.84
TNFAIP3-201ENST00000237289 KCTD21Q4G0X4 260 aa9.77□□□□□ -0.84
TNFAIP3-201ENST00000237289 SOWAHCQ53LP3 525 aaPredicted RBP9.77□□□□□ -0.84
TNFAIP3-201ENST00000237289 ZNF773Q6PK81 442 aa9.77□□□□□ -0.84
TNFAIP3-201ENST00000237289 SLC26A10Q8NG04 563 aa9.77□□□□□ -0.84
TNFAIP3-201ENST00000237289 MRPL13Q9BYD1 178 aaKnown RBP9.77□□□□□ -0.84
TNFAIP3-201ENST00000237289 DCTN6O00399 190 aa9.77□□□□□ -0.85
TNFAIP3-201ENST00000237289 TP53P04637 393 aaPredicted RBP9.77□□□□□ -0.85
TNFAIP3-201ENST00000237289 STOMP27105 288 aa9.77□□□□□ -0.85
TNFAIP3-201ENST00000237289 C21orf33P30042 268 aaPredicted RBP9.77□□□□□ -0.85
TNFAIP3-201ENST00000237289 P2RY4P51582 365 aa9.77□□□□□ -0.85
TNFAIP3-201ENST00000237289 TIMM23BQ5SRD1 257 aa9.77□□□□□ -0.85
TNFAIP3-201ENST00000237289 LYPD4Q6UWN0 246 aa9.77□□□□□ -0.85
TNFAIP3-201ENST00000237289 MEX3BQ6ZN04 569 aaKnown RBP9.77□□□□□ -0.85
TNFAIP3-201ENST00000237289 SYT9Q86SS6 491 aa9.77□□□□□ -0.85
TNFAIP3-201ENST00000237289 SKA3Q8IX90 412 aa9.77□□□□□ -0.85
TNFAIP3-201ENST00000237289 ZNF433Q8N7K0 673 aaPredicted RBP9.77□□□□□ -0.85
TNFAIP3-201ENST00000237289 C1orf162Q8NEQ5 155 aaPredicted RBP9.77□□□□□ -0.85
TNFAIP3-201ENST00000237289 SMAP2Q8WU79 429 aaPredicted RBP9.77□□□□□ -0.85
TNFAIP3-201ENST00000237289 SSR3Q9UNL2 185 aa9.77□□□□□ -0.85
TNFAIP3-201ENST00000237289 DIMT1Q9UNQ2 313 aaKnown RBP9.77□□□□□ -0.85
TNFAIP3-201ENST00000237289 SPTBN1Q01082 2364 aaKnown RBP9.77□□□□□ -0.85
TNFAIP3-201ENST00000237289 A0A1W2PQL4 384 aaPredicted RBP9.77□□□□□ -0.85
TNFAIP3-201ENST00000237289 FAM157BP0CG42 384 aa9.77□□□□□ -0.85
TNFAIP3-201ENST00000237289 CFL1P23528 166 aaKnown RBP9.77□□□□□ -0.85
TNFAIP3-201ENST00000237289 CRHBPP24387 322 aa9.77□□□□□ -0.85
TNFAIP3-201ENST00000237289 CX3CR1P49238 355 aa9.77□□□□□ -0.85
TNFAIP3-201ENST00000237289 WNT4P56705 351 aa9.77□□□□□ -0.85
TNFAIP3-201ENST00000237289 ZBTB46Q86UZ6 589 aa9.77□□□□□ -0.85
TNFAIP3-201ENST00000237289 MDP1Q86V88 176 aa9.77□□□□□ -0.85
TNFAIP3-201ENST00000237289 ZNF679Q8IYX0 411 aa9.77□□□□□ -0.85
TNFAIP3-201ENST00000237289 SSC4DQ8WTU2 575 aa9.77□□□□□ -0.85
TNFAIP3-201ENST00000237289 NTNG2Q96CW9 530 aa9.77□□□□□ -0.85
TNFAIP3-201ENST00000237289 DYNLRB1Q9NP97 96 aa9.77□□□□□ -0.85
TNFAIP3-201ENST00000237289 EDARQ9UNE0 448 aa9.77□□□□□ -0.85
TNFAIP3-201ENST00000237289 LOC100506127A0A0U1RQW1 187 aa9.76□□□□□ -0.85
TNFAIP3-201ENST00000237289 RGS6P49758 472 aa9.76□□□□□ -0.85
TNFAIP3-201ENST00000237289 EGR3Q06889 387 aa9.76□□□□□ -0.85
TNFAIP3-201ENST00000237289 MOGQ16653 247 aa9.76□□□□□ -0.85
TNFAIP3-201ENST00000237289 TIGD4Q8IY51 512 aa9.76□□□□□ -0.85
TNFAIP3-201ENST00000237289 LINC01560Q8TB33 94 aa9.76□□□□□ -0.85
TNFAIP3-201ENST00000237289 FAM71F1Q96KD3 344 aaPredicted RBP9.76□□□□□ -0.85
TNFAIP3-201ENST00000237289 IGLV1-36A0A0B4J1U3 117 aa9.76□□□□□ -0.85
TNFAIP3-201ENST00000237289 SYT7O43581 403 aa9.76□□□□□ -0.85
TNFAIP3-201ENST00000237289 SLC2A1P11166 492 aa9.76□□□□□ -0.85
TNFAIP3-201ENST00000237289 PSMB1P20618 241 aaKnown RBP9.76□□□□□ -0.85
TNFAIP3-201ENST00000237289 NR1H2P55055 460 aa9.76□□□□□ -0.85
TNFAIP3-201ENST00000237289 DBPQ10586 325 aaPredicted RBP9.76□□□□□ -0.85
TNFAIP3-201ENST00000237289 ARMCX4Q5H9R4 360 aa9.76□□□□□ -0.85
TNFAIP3-201ENST00000237289 UGT2A3Q6UWM9 527 aa9.76□□□□□ -0.85
TNFAIP3-201ENST00000237289 NAXEQ8NCW5 288 aa9.76□□□□□ -0.85
TNFAIP3-201ENST00000237289 GPER1Q99527 375 aa9.76□□□□□ -0.85
TNFAIP3-201ENST00000237289 PLCXD1Q9NUJ7 323 aa9.76□□□□□ -0.85
TNFAIP3-201ENST00000237289 HAO2Q9NYQ3 351 aa9.76□□□□□ -0.85
TNFAIP3-201ENST00000237289 SNTB1Q13884 538 aaKnown RBP9.76□□□□□ -0.85
TNFAIP3-201ENST00000237289 NKPD1Q17RQ9 610 aa9.76□□□□□ -0.85
TNFAIP3-201ENST00000237289 OR2H1Q9GZK4 316 aa9.76□□□□□ -0.85
TNFAIP3-201ENST00000237289 BABAM2Q9NXR7 383 aa9.76□□□□□ -0.85
TNFAIP3-201ENST00000237289 MRPS14O60783 128 aaKnown RBP9.76□□□□□ -0.85
TNFAIP3-201ENST00000237289 TFP02787 698 aa9.76□□□□□ -0.85
TNFAIP3-201ENST00000237289 MAP2K4P45985 399 aa9.76□□□□□ -0.85
TNFAIP3-201ENST00000237289 PHYHD1Q5SRE7 291 aa9.76□□□□□ -0.85
TNFAIP3-201ENST00000237289 TMEM244Q5VVB8 128 aa9.76□□□□□ -0.85
TNFAIP3-201ENST00000237289 OR5AK2Q8NH90 309 aa9.76□□□□□ -0.85
TNFAIP3-201ENST00000237289 THRSPQ92748 146 aa9.76□□□□□ -0.85
TNFAIP3-201ENST00000237289 SLC17A5Q9NRA2 495 aa9.76□□□□□ -0.85
TNFAIP3-201ENST00000237289 ERVK13-1Q9NX77 482 aa9.76□□□□□ -0.85
TNFAIP3-201ENST00000237289 ZFYVE26Q68DK2 2539 aa9.75□□□□□ -0.85
TNFAIP3-201ENST00000237289 PCSK5Q92824 1860 aa9.75□□□□□ -0.85
TNFAIP3-201ENST00000237289 ANXA2P2A6NMY6 339 aa9.75□□□□□ -0.85
TNFAIP3-201ENST00000237289 TNFSF13O75888 250 aa9.75□□□□□ -0.85
TNFAIP3-201ENST00000237289 SERPINA5P05154 406 aa9.75□□□□□ -0.85
TNFAIP3-201ENST00000237289 MYL9P24844 172 aa9.75□□□□□ -0.85
TNFAIP3-201ENST00000237289 GALEQ14376 348 aa9.75□□□□□ -0.85
TNFAIP3-201ENST00000237289 USP51Q70EK9 711 aa9.75□□□□□ -0.85
TNFAIP3-201ENST00000237289 ZNF367Q7RTV3 350 aa9.75□□□□□ -0.85
TNFAIP3-201ENST00000237289 AKAP1Q92667 903 aaKnown RBP eCLIP9.75□□□□□ -0.85
TNFAIP3-201ENST00000237289 ZNF837Q96EG3 531 aaPredicted RBP9.75□□□□□ -0.85
TNFAIP3-201ENST00000237289 KCNJ15Q99712 375 aa9.75□□□□□ -0.85
TNFAIP3-201ENST00000237289 ELL3Q9HB65 397 aaPredicted RBP9.75□□□□□ -0.85
TNFAIP3-201ENST00000237289 UBAP1Q9NZ09 502 aa9.75□□□□□ -0.85
TNFAIP3-201ENST00000237289 MPDZO75970 2070 aa9.75□□□□□ -0.85
TNFAIP3-201ENST00000237289 TIMM8AO60220 97 aaPredicted RBP9.75□□□□□ -0.85
TNFAIP3-201ENST00000237289 WBP4O75554 376 aaKnown RBP9.75□□□□□ -0.85
TNFAIP3-201ENST00000237289 TOXO94900 526 aa9.75□□□□□ -0.85
TNFAIP3-201ENST00000237289 PIPP12273 146 aaPredicted RBP9.75□□□□□ -0.85
TNFAIP3-201ENST00000237289 CBR1P16152 277 aa9.75□□□□□ -0.85
TNFAIP3-201ENST00000237289 PTAFRP25105 342 aa9.75□□□□□ -0.85
TNFAIP3-201ENST00000237289 TTKP33981 857 aa9.75□□□□□ -0.85
TNFAIP3-201ENST00000237289 OR12D2P58182 307 aa9.75□□□□□ -0.85
TNFAIP3-201ENST00000237289 SLC25A30Q5SVS4 291 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms