RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 CMC2Q9NRP2 79 aa10.89□□□□□ -0.67
LSM5-201ENST00000223084 EIF3KQ9UBQ5 218 aaKnown RBP10.89□□□□□ -0.67
LSM5-201ENST00000223084 NF1P21359 2839 aa10.89□□□□□ -0.67
LSM5-201ENST00000223084 CSPG4Q6UVK1 2322 aa10.89□□□□□ -0.67
LSM5-201ENST00000223084 ZFHX3Q15911 3703 aa10.88□□□□□ -0.67
LSM5-201ENST00000223084 OR6C6A6NF89 314 aa10.88□□□□□ -0.67
LSM5-201ENST00000223084 G3V2T6 193 aa10.88□□□□□ -0.67
LSM5-201ENST00000223084 IFNGP01579 166 aa10.88□□□□□ -0.67
LSM5-201ENST00000223084 DBHP09172 617 aa10.88□□□□□ -0.67
LSM5-201ENST00000223084 COX5BP10606 129 aa10.88□□□□□ -0.67
LSM5-201ENST00000223084 PSKH1P11801 424 aa10.88□□□□□ -0.67
LSM5-201ENST00000223084 SPI1P17947 270 aa10.88□□□□□ -0.67
LSM5-201ENST00000223084 GGT2P36268 569 aa10.88□□□□□ -0.67
LSM5-201ENST00000223084 PPOXP50336 477 aa10.88□□□□□ -0.67
LSM5-201ENST00000223084 EFNA4P52798 201 aa10.88□□□□□ -0.67
LSM5-201ENST00000223084 SLC25A1P53007 311 aa10.88□□□□□ -0.67
LSM5-201ENST00000223084 CDK5Q00535 292 aa10.88□□□□□ -0.67
LSM5-201ENST00000223084 SLC27A4Q6P1M0 643 aa10.88□□□□□ -0.67
LSM5-201ENST00000223084 TMEM154Q6P9G4 183 aa10.88□□□□□ -0.67
LSM5-201ENST00000223084 CFAP77Q6ZQR2 320 aa10.88□□□□□ -0.67
LSM5-201ENST00000223084 HIPK1Q86Z02 1210 aa10.88□□□□□ -0.67
LSM5-201ENST00000223084 ZNF525Q8N782 197 aa10.88□□□□□ -0.67
LSM5-201ENST00000223084 ZNF511Q8NB15 262 aa10.88□□□□□ -0.67
LSM5-201ENST00000223084 GJC3Q8NFK1 279 aa10.88□□□□□ -0.67
LSM5-201ENST00000223084 OR1F12Q8NHA8 337 aa10.88□□□□□ -0.67
LSM5-201ENST00000223084 ABHD4Q8TB40 342 aa10.88□□□□□ -0.67
LSM5-201ENST00000223084 C4orf45Q96LM5 186 aa10.88□□□□□ -0.67
LSM5-201ENST00000223084 SMR3AQ99954 134 aa10.88□□□□□ -0.67
LSM5-201ENST00000223084 BDH2Q9BUT1 245 aa10.88□□□□□ -0.67
LSM5-201ENST00000223084 CDADC1Q9BWV3 514 aa10.88□□□□□ -0.67
LSM5-201ENST00000223084 BCL2L14Q9BZR8 327 aa10.88□□□□□ -0.67
LSM5-201ENST00000223084 TPK1Q9H3S4 243 aa10.88□□□□□ -0.67
LSM5-201ENST00000223084 POFUT1Q9H488 388 aa10.88□□□□□ -0.67
LSM5-201ENST00000223084 GSX1Q9H4S2 264 aaPredicted RBP10.88□□□□□ -0.67
LSM5-201ENST00000223084 WDR76Q9H967 626 aa10.88□□□□□ -0.67
LSM5-201ENST00000223084 PAPOLBQ9NRJ5 636 aaKnown RBP10.88□□□□□ -0.67
LSM5-201ENST00000223084 NDRG4Q9ULP0 352 aaKnown RBP10.88□□□□□ -0.67
LSM5-201ENST00000223084 GRIP1Q9Y3R0 1128 aa10.88□□□□□ -0.67
LSM5-201ENST00000223084 MTORP42345 2549 aa10.88□□□□□ -0.67
LSM5-201ENST00000223084 A0A1W2PPW3 197 aa10.87□□□□□ -0.67
LSM5-201ENST00000223084 SAC3D1A6NKF1 404 aa10.87□□□□□ -0.67
LSM5-201ENST00000223084 RNF223E7ERA6 249 aa10.87□□□□□ -0.67
LSM5-201ENST00000223084 H3BNX3 289 aa10.87□□□□□ -0.67
LSM5-201ENST00000223084 M0R233 179 aa10.87□□□□□ -0.67
LSM5-201ENST00000223084 ABHD16AO95870 558 aa10.87□□□□□ -0.67
LSM5-201ENST00000223084 F12P00748 615 aaPredicted RBP10.87□□□□□ -0.67
LSM5-201ENST00000223084 FCGR1AP12314 374 aa10.87□□□□□ -0.67
LSM5-201ENST00000223084 ZNF250P15622 560 aa10.87□□□□□ -0.67
LSM5-201ENST00000223084 ZNF823P16415 610 aa10.87□□□□□ -0.67
LSM5-201ENST00000223084 ZNF3P17036 446 aa10.87□□□□□ -0.67
LSM5-201ENST00000223084 MPV17P39210 176 aa10.87□□□□□ -0.67
LSM5-201ENST00000223084 EVX1P49640 407 aa10.87□□□□□ -0.67
LSM5-201ENST00000223084 CRISP1P54107 249 aa10.87□□□□□ -0.67
LSM5-201ENST00000223084 KLF3P57682 345 aaPredicted RBP10.87□□□□□ -0.67
LSM5-201ENST00000223084 PPP1CBP62140 327 aa10.87□□□□□ -0.67
LSM5-201ENST00000223084 HIST1H3AP68431 136 aa10.87□□□□□ -0.67
LSM5-201ENST00000223084 TMEM255AQ5JRV8 349 aa10.87□□□□□ -0.67
LSM5-201ENST00000223084 ELFN2Q5R3F8 820 aa10.87□□□□□ -0.67
LSM5-201ENST00000223084 HIST2H3PS2Q5TEC6 136 aa10.87□□□□□ -0.67
LSM5-201ENST00000223084 SLC18B1Q6NT16 456 aa10.87□□□□□ -0.67
LSM5-201ENST00000223084 DNM1P46Q6ZS02 220 aa10.87□□□□□ -0.67
LSM5-201ENST00000223084 HIST2H3AQ71DI3 136 aa10.87□□□□□ -0.67
LSM5-201ENST00000223084 MAPK1IP1LQ8NDC0 245 aa10.87□□□□□ -0.67
LSM5-201ENST00000223084 OR6K6Q8NGW6 343 aa10.87□□□□□ -0.67
LSM5-201ENST00000223084 OR2AJ1Q8NGZ0 328 aa10.87□□□□□ -0.67
LSM5-201ENST00000223084 SYNPRQ8TBG9 265 aa10.87□□□□□ -0.67
LSM5-201ENST00000223084 SLC25A40Q8TBP6 338 aa10.87□□□□□ -0.67
LSM5-201ENST00000223084 GTF3AQ92664 365 aaKnown RBP10.87□□□□□ -0.67
LSM5-201ENST00000223084 PTP4A1Q93096 173 aa10.87□□□□□ -0.67
LSM5-201ENST00000223084 C18orf12Q96KH6 178 aa10.87□□□□□ -0.67
LSM5-201ENST00000223084 PKP2Q99959 881 aa10.87□□□□□ -0.67
LSM5-201ENST00000223084 OR2J1Q9GZK6 312 aa10.87□□□□□ -0.67
LSM5-201ENST00000223084 TAAR3PQ9P1P4 343 aa10.87□□□□□ -0.67
LSM5-201ENST00000223084 CYB5R1Q9UHQ9 305 aa10.87□□□□□ -0.67
LSM5-201ENST00000223084 CR1P17927 2039 aa10.86□□□□□ -0.67
LSM5-201ENST00000223084 IGHV4-30-2A0A087WSY4 118 aa10.86□□□□□ -0.67
LSM5-201ENST00000223084 SURF4O15260 269 aa10.86□□□□□ -0.67
LSM5-201ENST00000223084 HMGN1P05114 100 aa10.86□□□□□ -0.67
LSM5-201ENST00000223084 INHBBP09529 407 aa10.86□□□□□ -0.67
LSM5-201ENST00000223084 NAT2P11245 290 aa10.86□□□□□ -0.67
LSM5-201ENST00000223084 EPHA2P29317 976 aa10.86□□□□□ -0.67
LSM5-201ENST00000223084 FMO3P31513 532 aa10.86□□□□□ -0.67
LSM5-201ENST00000223084 CARTPTQ16568 116 aa10.86□□□□□ -0.67
LSM5-201ENST00000223084 RSPO1Q2MKA7 263 aaPredicted RBP10.86□□□□□ -0.67
LSM5-201ENST00000223084 ZNF718Q3SXZ3 478 aa10.86□□□□□ -0.67
LSM5-201ENST00000223084 LINC01590Q5TEZ4 76 aa10.86□□□□□ -0.67
LSM5-201ENST00000223084 PLBD1Q6P4A8 553 aa10.86□□□□□ -0.67
LSM5-201ENST00000223084 ZDHHC13Q8IUH4 622 aa10.86□□□□□ -0.67
LSM5-201ENST00000223084 IPCEF1Q8WWN9 437 aaPredicted RBP10.86□□□□□ -0.67
LSM5-201ENST00000223084 DNAJC9Q8WXX5 260 aa10.86□□□□□ -0.67
LSM5-201ENST00000223084 MARS2Q96GW9 593 aaKnown RBP10.86□□□□□ -0.67
LSM5-201ENST00000223084 CENPNQ96H22 339 aaPredicted RBP10.86□□□□□ -0.67
LSM5-201ENST00000223084 MAP6Q96JE9 813 aa10.86□□□□□ -0.67
LSM5-201ENST00000223084 COX4I2Q96KJ9 171 aa10.86□□□□□ -0.67
LSM5-201ENST00000223084 PITX2Q99697 317 aa10.86□□□□□ -0.67
LSM5-201ENST00000223084 GABARAPL1Q9H0R8 117 aa10.86□□□□□ -0.67
LSM5-201ENST00000223084 RAB1BQ9H0U4 201 aa10.86□□□□□ -0.67
LSM5-201ENST00000223084 OR51V1Q9H2C8 321 aa10.86□□□□□ -0.67
LSM5-201ENST00000223084 ELOVL3Q9HB03 270 aa10.86□□□□□ -0.67
LSM5-201ENST00000223084 SLC25A19Q9HC21 320 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms