RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 CRHBPP24387 322 aa23.69■■□□□ 1.38
CHMP4B-201ENST00000217402 HTR5AP47898 357 aa23.69■■□□□ 1.38
CHMP4B-201ENST00000217402 ACTC1P68032 377 aa23.69■■□□□ 1.38
CHMP4B-201ENST00000217402 ACTA1P68133 377 aa23.69■■□□□ 1.38
CHMP4B-201ENST00000217402 ST3GAL4Q11206 333 aa23.69■■□□□ 1.38
CHMP4B-201ENST00000217402 C1QTNF12Q5T7M4 302 aa23.69■■□□□ 1.38
CHMP4B-201ENST00000217402 SSX8Q7RTT4 187 aa23.69■■□□□ 1.38
CHMP4B-201ENST00000217402 SSX6Q7RTT6 188 aa23.69■■□□□ 1.38
CHMP4B-201ENST00000217402 SGCDQ92629 289 aa23.69■■□□□ 1.38
CHMP4B-201ENST00000217402 DACH2Q96NX9 599 aa23.69■■□□□ 1.38
CHMP4B-201ENST00000217402 MNTQ99583 582 aa23.69■■□□□ 1.38
CHMP4B-201ENST00000217402 COPS4Q9BT78 406 aa23.69■■□□□ 1.38
CHMP4B-201ENST00000217402 PAK1IP1Q9NWT1 392 aaPredicted RBP23.69■■□□□ 1.38
CHMP4B-201ENST00000217402 CNOT2Q9NZN8 540 aaKnown RBP23.69■■□□□ 1.38
CHMP4B-201ENST00000217402 CRNNQ9UBG3 495 aaPredicted RBP23.69■■□□□ 1.38
CHMP4B-201ENST00000217402 TPRKBQ9Y3C4 175 aa23.69■■□□□ 1.38
CHMP4B-201ENST00000217402 IGHV1-18A0A0C4DH31 117 aa23.68■■□□□ 1.38
CHMP4B-201ENST00000217402 IRGMA1A4Y4 181 aa23.68■■□□□ 1.38
CHMP4B-201ENST00000217402 PRR32B1ATL7 298 aa23.68■■□□□ 1.38
CHMP4B-201ENST00000217402 PSMD9O00233 223 aa23.68■■□□□ 1.38
CHMP4B-201ENST00000217402 SERPINA5P05154 406 aa23.68■■□□□ 1.38
CHMP4B-201ENST00000217402 ADRA2AP08913 450 aa23.68■■□□□ 1.38
CHMP4B-201ENST00000217402 PIPP12273 146 aaPredicted RBP23.68■■□□□ 1.38
CHMP4B-201ENST00000217402 CCL2P13500 99 aa23.68■■□□□ 1.38
CHMP4B-201ENST00000217402 MVKQ03426 396 aa23.68■■□□□ 1.38
CHMP4B-201ENST00000217402 RBM48Q5RL73 367 aaKnown RBP23.68■■□□□ 1.38
CHMP4B-201ENST00000217402 ACBD7Q8N6N7 88 aa23.68■■□□□ 1.38
CHMP4B-201ENST00000217402 OR1F12Q8NHA8 337 aa23.68■■□□□ 1.38
CHMP4B-201ENST00000217402 ATF6BQ99941 703 aa23.68■■□□□ 1.38
CHMP4B-201ENST00000217402 HDHD2Q9H0R4 259 aa23.68■■□□□ 1.38
CHMP4B-201ENST00000217402 MOV10Q9HCE1 1003 aaKnown RBP23.68■■□□□ 1.38
CHMP4B-201ENST00000217402 FGF20Q9NP95 211 aaPredicted RBP23.68■■□□□ 1.38
CHMP4B-201ENST00000217402 DAPL1A0PJW8 107 aa23.67■■□□□ 1.38
CHMP4B-201ENST00000217402 SYNGR3O43761 229 aa23.67■■□□□ 1.38
CHMP4B-201ENST00000217402 IGLV1-44P01699 117 aa23.67■■□□□ 1.38
CHMP4B-201ENST00000217402 CECR9P0C854 216 aa23.67■■□□□ 1.38
CHMP4B-201ENST00000217402 ZNF322Q6U7Q0 402 aaPredicted RBP23.67■■□□□ 1.38
CHMP4B-201ENST00000217402 STX19Q8N4C7 294 aa23.67■■□□□ 1.38
CHMP4B-201ENST00000217402 RNF133Q8WVZ7 376 aa23.67■■□□□ 1.38
CHMP4B-201ENST00000217402 SLC7A6Q92536 515 aa23.67■■□□□ 1.38
CHMP4B-201ENST00000217402 FKBP14Q9NWM8 211 aa23.67■■□□□ 1.38
CHMP4B-201ENST00000217402 OR6C6A6NF89 314 aa23.66■■□□□ 1.38
CHMP4B-201ENST00000217402 ZNF878C9JN71 531 aa23.66■■□□□ 1.38
CHMP4B-201ENST00000217402 MAGEB4O15481 346 aaPredicted RBP23.66■■□□□ 1.38
CHMP4B-201ENST00000217402 IGHA1P01876 353 aa23.66■■□□□ 1.38
CHMP4B-201ENST00000217402 STOMP27105 288 aa23.66■■□□□ 1.38
CHMP4B-201ENST00000217402 ZNF85Q03923 595 aa23.66■■□□□ 1.38
CHMP4B-201ENST00000217402 LRRN1Q6UXK5 716 aa23.66■■□□□ 1.38
CHMP4B-201ENST00000217402 LHFPL3Q86UP9 236 aa23.66■■□□□ 1.38
CHMP4B-201ENST00000217402 FAM169BQ8N8A8 192 aa23.66■■□□□ 1.38
CHMP4B-201ENST00000217402 SLC30A7Q8NEW0 376 aa23.66■■□□□ 1.38
CHMP4B-201ENST00000217402 ASB17Q8WXJ9 295 aa23.66■■□□□ 1.38
CHMP4B-201ENST00000217402 TMEM80Q96HE8 168 aa23.66■■□□□ 1.38
CHMP4B-201ENST00000217402 NGBQ9NPG2 151 aa23.66■■□□□ 1.38
CHMP4B-201ENST00000217402 IKZF2Q9UKS7 526 aa23.66■■□□□ 1.38
CHMP4B-201ENST00000217402 FBXL3Q9UKT7 428 aa23.66■■□□□ 1.38
CHMP4B-201ENST00000217402 BLOC1S6Q9UL45 172 aa23.66■■□□□ 1.38
CHMP4B-201ENST00000217402 PHYHO14832 338 aa23.66■■□□□ 1.38
CHMP4B-201ENST00000217402 CASKO14936 926 aa23.66■■□□□ 1.38
CHMP4B-201ENST00000217402 CCNOP22674 350 aa23.66■■□□□ 1.38
CHMP4B-201ENST00000217402 PAX7P23759 505 aa23.66■■□□□ 1.38
CHMP4B-201ENST00000217402 DCKP27707 260 aa23.66■■□□□ 1.38
CHMP4B-201ENST00000217402 APLNRP35414 380 aa23.66■■□□□ 1.38
CHMP4B-201ENST00000217402 TAF13Q15543 124 aa23.66■■□□□ 1.38
CHMP4B-201ENST00000217402 SLCO1C1Q9NYB5 712 aa23.66■■□□□ 1.38
CHMP4B-201ENST00000217402 DIMT1Q9UNQ2 313 aaKnown RBP23.66■■□□□ 1.38
CHMP4B-201ENST00000217402 SLC35A2P78381 396 aa23.65■■□□□ 1.38
CHMP4B-201ENST00000217402 KCTD18Q6PI47 426 aaPredicted RBP23.65■■□□□ 1.38
CHMP4B-201ENST00000217402 KRT77Q7Z794 578 aa23.65■■□□□ 1.38
CHMP4B-201ENST00000217402 DDX28Q9NUL7 540 aaKnown RBP23.65■■□□□ 1.38
CHMP4B-201ENST00000217402 ERVK-18Q9QC07 812 aa23.65■■□□□ 1.38
CHMP4B-201ENST00000217402 SPTAN1Q13813 2472 aaKnown RBP23.64■■□□□ 1.38
CHMP4B-201ENST00000217402 LOC100509620A0A075B734 347 aa23.64■■□□□ 1.38
CHMP4B-201ENST00000217402 C5orf49A4QMS7 147 aa23.64■■□□□ 1.38
CHMP4B-201ENST00000217402 PTHP01270 115 aa23.64■■□□□ 1.38
CHMP4B-201ENST00000217402 DBHP09172 617 aa23.64■■□□□ 1.38
CHMP4B-201ENST00000217402 H2BFMP0C1H6 154 aa23.64■■□□□ 1.38
CHMP4B-201ENST00000217402 EPXP11678 715 aa23.64■■□□□ 1.38
CHMP4B-201ENST00000217402 CRYGSP22914 178 aa23.64■■□□□ 1.38
CHMP4B-201ENST00000217402 EEF1B2P24534 225 aaKnown RBP23.64■■□□□ 1.38
CHMP4B-201ENST00000217402 C21orf33P30042 268 aaPredicted RBP23.64■■□□□ 1.38
CHMP4B-201ENST00000217402 OPRL1P41146 370 aa23.64■■□□□ 1.38
CHMP4B-201ENST00000217402 GDI2P50395 445 aaKnown RBP23.64■■□□□ 1.38
CHMP4B-201ENST00000217402 GALK2Q01415 458 aa23.64■■□□□ 1.38
CHMP4B-201ENST00000217402 TMEM108Q6UXF1 575 aa23.64■■□□□ 1.38
CHMP4B-201ENST00000217402 SNX33Q8WV41 574 aa23.64■■□□□ 1.38
CHMP4B-201ENST00000217402 MYDGFQ969H8 173 aa23.64■■□□□ 1.38
CHMP4B-201ENST00000217402 COQ7Q99807 217 aa23.64■■□□□ 1.38
CHMP4B-201ENST00000217402 ERVK13-1Q9NX77 482 aa23.64■■□□□ 1.38
CHMP4B-201ENST00000217402 FASNP49327 2511 aaKnown RBP23.64■■□□□ 1.37
CHMP4B-201ENST00000217402 MYL12AP19105 171 aa23.63■■□□□ 1.37
CHMP4B-201ENST00000217402 ETV1P50549 477 aa23.63■■□□□ 1.37
CHMP4B-201ENST00000217402 BSPH1Q075Z2 132 aa23.63■■□□□ 1.37
CHMP4B-201ENST00000217402 TBC1D28Q2M2D7 210 aa23.63■■□□□ 1.37
CHMP4B-201ENST00000217402 ACBD4Q8NC06 268 aa23.63■■□□□ 1.37
CHMP4B-201ENST00000217402 FAM222BQ8WU58 562 aa23.63■■□□□ 1.37
CHMP4B-201ENST00000217402 IPCEF1Q8WWN9 437 aaPredicted RBP23.63■■□□□ 1.37
CHMP4B-201ENST00000217402 POM121L2Q96KW2 1035 aa23.63■■□□□ 1.37
CHMP4B-201ENST00000217402 OR8B4Q96RC9 309 aa23.63■■□□□ 1.37
CHMP4B-201ENST00000217402 ALG8Q9BVK2 526 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms