RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 HIST1H2BMQ99879 126 aa13.27□□□□□ -0.29
PTPRA-201ENST00000216877 OR2AG1Q9H205 316 aa13.27□□□□□ -0.29
PTPRA-201ENST00000216877 UBQLN4Q9NRR5 601 aa13.27□□□□□ -0.29
PTPRA-201ENST00000216877 FBXL21Q9UKT6 434 aa13.27□□□□□ -0.29
PTPRA-201ENST00000216877 TMEM184BQ9Y519 407 aaPredicted RBP13.27□□□□□ -0.29
PTPRA-201ENST00000216877 SNRPD1P62314 119 aaKnown RBP13.26□□□□□ -0.29
PTPRA-201ENST00000216877 MRPL58Q14197 206 aaKnown RBP13.26□□□□□ -0.29
PTPRA-201ENST00000216877 ANKRD16Q6P6B7 361 aa13.26□□□□□ -0.29
PTPRA-201ENST00000216877 OR2AP1Q8NGE2 309 aa13.26□□□□□ -0.29
PTPRA-201ENST00000216877 FAM213BQ8TBF2 198 aa13.26□□□□□ -0.29
PTPRA-201ENST00000216877 TMEM100Q9NV29 134 aa13.26□□□□□ -0.29
PTPRA-201ENST00000216877 SLCO1B1Q9Y6L6 691 aa13.26□□□□□ -0.29
PTPRA-201ENST00000216877 A0A0A6YYH2 397 aa13.26□□□□□ -0.29
PTPRA-201ENST00000216877 A6NJ64 397 aa13.26□□□□□ -0.29
PTPRA-201ENST00000216877 H0YIZ8 118 aa13.26□□□□□ -0.29
PTPRA-201ENST00000216877 RAMP1O60894 148 aa13.26□□□□□ -0.29
PTPRA-201ENST00000216877 NPY4RP50391 375 aa13.26□□□□□ -0.29
PTPRA-201ENST00000216877 SLC10A1Q14973 349 aa13.26□□□□□ -0.29
PTPRA-201ENST00000216877 PPA1Q15181 289 aa13.26□□□□□ -0.29
PTPRA-201ENST00000216877 TCEA2Q15560 299 aa13.26□□□□□ -0.29
PTPRA-201ENST00000216877 FAM46CQ5VWP2 391 aa13.26□□□□□ -0.29
PTPRA-201ENST00000216877 OR4C11Q6IEV9 310 aa13.26□□□□□ -0.29
PTPRA-201ENST00000216877 WDR88Q6ZMY6 472 aa13.26□□□□□ -0.29
PTPRA-201ENST00000216877 PRSS35Q8N3Z0 413 aa13.26□□□□□ -0.29
PTPRA-201ENST00000216877 TERB2Q8NHR7 220 aa13.26□□□□□ -0.29
PTPRA-201ENST00000216877 CMBLQ96DG6 245 aa13.26□□□□□ -0.29
PTPRA-201ENST00000216877 IGFLR1Q9H665 355 aa13.26□□□□□ -0.29
PTPRA-201ENST00000216877 PCDHB8Q9UN66 801 aa13.26□□□□□ -0.29
PTPRA-201ENST00000216877 CENPVL1A0A0U1RR11 272 aa13.26□□□□□ -0.29
PTPRA-201ENST00000216877 NDUFS4O43181 175 aa13.26□□□□□ -0.29
PTPRA-201ENST00000216877 LEFTY1O75610 366 aa13.26□□□□□ -0.29
PTPRA-201ENST00000216877 SCGNO76038 276 aa13.26□□□□□ -0.29
PTPRA-201ENST00000216877 C1orf105O95561 183 aa13.26□□□□□ -0.29
PTPRA-201ENST00000216877 S100A7P31151 101 aa13.26□□□□□ -0.29
PTPRA-201ENST00000216877 HSD11B1LQ7Z5J1 315 aa13.26□□□□□ -0.29
PTPRA-201ENST00000216877 CBARPQ8N350 705 aaPredicted RBP13.26□□□□□ -0.29
PTPRA-201ENST00000216877 PTCHD1Q96NR3 888 aa13.26□□□□□ -0.29
PTPRA-201ENST00000216877 ELOVL1Q9BW60 279 aa13.26□□□□□ -0.29
PTPRA-201ENST00000216877 DPEP2Q9H4A9 486 aa13.26□□□□□ -0.29
PTPRA-201ENST00000216877 LAMA3Q16787 3333 aa13.25□□□□□ -0.29
PTPRA-201ENST00000216877 SLC38A8A6NNN8 435 aa13.25□□□□□ -0.29
PTPRA-201ENST00000216877 M0R143 59 aa13.25□□□□□ -0.29
PTPRA-201ENST00000216877 CD5P06127 495 aa13.25□□□□□ -0.29
PTPRA-201ENST00000216877 TACSTD2P09758 323 aa13.25□□□□□ -0.29
PTPRA-201ENST00000216877 CSNK2A2P19784 350 aaPredicted RBP13.25□□□□□ -0.29
PTPRA-201ENST00000216877 SLC26A5P58743 744 aa13.25□□□□□ -0.29
PTPRA-201ENST00000216877 CYCSP99999 105 aaKnown RBP13.25□□□□□ -0.29
PTPRA-201ENST00000216877 GLYATL3Q5SZD4 288 aa13.25□□□□□ -0.29
PTPRA-201ENST00000216877 POMZP3Q6PJE2 187 aa13.25□□□□□ -0.29
PTPRA-201ENST00000216877 ZNF664Q8N3J9 261 aa13.25□□□□□ -0.29
PTPRA-201ENST00000216877 RASD2Q96D21 266 aa13.25□□□□□ -0.29
PTPRA-201ENST00000216877 SEH1LQ96EE3 360 aa13.25□□□□□ -0.29
PTPRA-201ENST00000216877 TAAR9Q96RI9 348 aa13.25□□□□□ -0.29
PTPRA-201ENST00000216877 NDUFAF3Q9BU61 184 aa13.25□□□□□ -0.29
PTPRA-201ENST00000216877 ZNF426Q9BUY5 554 aa13.25□□□□□ -0.29
PTPRA-201ENST00000216877 CYTL1Q9NRR1 136 aa13.25□□□□□ -0.29
PTPRA-201ENST00000216877 ZNF443Q9Y2A4 671 aaPredicted RBP13.25□□□□□ -0.29
PTPRA-201ENST00000216877 A0A1B0GTI1 187 aa13.25□□□□□ -0.29
PTPRA-201ENST00000216877 SLC5A10A0PJK1 596 aa13.25□□□□□ -0.29
PTPRA-201ENST00000216877 SLCO2B1O94956 709 aa13.25□□□□□ -0.29
PTPRA-201ENST00000216877 SCGB1D1O95968 90 aa13.25□□□□□ -0.29
PTPRA-201ENST00000216877 KNG1P01042 644 aa13.25□□□□□ -0.29
PTPRA-201ENST00000216877 FCGR3AP08637 254 aa13.25□□□□□ -0.29
PTPRA-201ENST00000216877 TRGC1P0CF51 173 aa13.25□□□□□ -0.29
PTPRA-201ENST00000216877 MESTQ5EB52 335 aa13.25□□□□□ -0.29
PTPRA-201ENST00000216877 TXNDC8Q6A555 127 aa13.25□□□□□ -0.29
PTPRA-201ENST00000216877 Q6ZVU0 165 aa13.25□□□□□ -0.29
PTPRA-201ENST00000216877 ASB13Q8WXK3 278 aa13.25□□□□□ -0.29
PTPRA-201ENST00000216877 HHIPL1Q96JK4 782 aa13.25□□□□□ -0.29
PTPRA-201ENST00000216877 GPR62Q9BZJ7 368 aa13.25□□□□□ -0.29
PTPRA-201ENST00000216877 RXFP3Q9NSD7 469 aa13.25□□□□□ -0.29
PTPRA-201ENST00000216877 KCNE5Q9UJ90 142 aa13.25□□□□□ -0.29
PTPRA-201ENST00000216877 H7C1C5 153 aa13.25□□□□□ -0.29
PTPRA-201ENST00000216877 ATXN7O15265 892 aaPredicted RBP13.25□□□□□ -0.29
PTPRA-201ENST00000216877 IGLV3-27P01718 113 aa13.25□□□□□ -0.29
PTPRA-201ENST00000216877 GDI1P31150 447 aa13.25□□□□□ -0.29
PTPRA-201ENST00000216877 LCN6P62502 163 aa13.25□□□□□ -0.29
PTPRA-201ENST00000216877 HAGHQ16775 308 aa13.25□□□□□ -0.29
PTPRA-201ENST00000216877 TRAPPC6BQ86SZ2 158 aa13.25□□□□□ -0.29
PTPRA-201ENST00000216877 MRPL41Q8IXM3 137 aaKnown RBP13.25□□□□□ -0.29
PTPRA-201ENST00000216877 CSNK1A1LQ8N752 337 aa13.25□□□□□ -0.29
PTPRA-201ENST00000216877 PNLDC1Q8NA58 520 aaKnown RBP13.25□□□□□ -0.29
PTPRA-201ENST00000216877 ADAMTS17Q8TE56 1095 aa13.25□□□□□ -0.29
PTPRA-201ENST00000216877 SUSD6Q92537 303 aa13.25□□□□□ -0.29
PTPRA-201ENST00000216877 PRRT1Q99946 306 aa13.25□□□□□ -0.29
PTPRA-201ENST00000216877 PRSS16Q9NQE7 514 aa13.25□□□□□ -0.29
PTPRA-201ENST00000216877 LSM7Q9UK45 103 aaKnown RBP13.25□□□□□ -0.29
PTPRA-201ENST00000216877 BPIFB3P59826 476 aa13.24□□□□□ -0.29
PTPRA-201ENST00000216877 SPOCK1Q08629 439 aa13.24□□□□□ -0.29
PTPRA-201ENST00000216877 RPUSD3Q6P087 351 aaKnown RBP13.24□□□□□ -0.29
PTPRA-201ENST00000216877 BIVMQ86UB2 503 aa13.24□□□□□ -0.29
PTPRA-201ENST00000216877 OR13C8Q8NGS7 320 aa13.24□□□□□ -0.29
PTPRA-201ENST00000216877 NTNG2Q96CW9 530 aa13.24□□□□□ -0.29
PTPRA-201ENST00000216877 SLC17A9Q9BYT1 436 aa13.24□□□□□ -0.29
PTPRA-201ENST00000216877 BCL2L10Q9HD36 194 aa13.24□□□□□ -0.29
PTPRA-201ENST00000216877 HSF4Q9ULV5 492 aa13.24□□□□□ -0.29
PTPRA-201ENST00000216877 SIGLEC7Q9Y286 467 aa13.24□□□□□ -0.29
PTPRA-201ENST00000216877 ZNF705FA8MVS1 300 aaPredicted RBP13.24□□□□□ -0.29
PTPRA-201ENST00000216877 K7EPK0 472 aa13.24□□□□□ -0.29
PTPRA-201ENST00000216877 P2RX6O15547 441 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms