RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 CSO75390 466 aaKnown RBP13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 MMP7P09237 267 aaPredicted RBP13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 AKR1C3P42330 323 aa13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 RNF113BQ8IZP6 322 aaKnown RBP13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 OR2AK2Q8NG84 335 aa13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 OR14A16Q8NHC5 309 aa13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 SIAEQ9HAT2 523 aa13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 SIRT3Q9NTG7 399 aaPredicted RBP13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 ATP23Q9Y6H3 246 aa13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 FAM208AQ9UK61 1670 aaKnown RBP13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 PRSS38A1L453 326 aa13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 GPRIN2O60269 458 aa13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 MAT1AQ00266 395 aaKnown RBP13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 SLC10A2Q12908 348 aaPredicted RBP13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 TMEM135Q86UB9 458 aa13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 CHST14Q8NCH0 376 aa13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 IGSF5Q9NSI5 407 aa13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 MED1Q15648 1581 aaPredicted RBP13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 TARBP1Q13395 1621 aaKnown RBP13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 CYBAP13498 195 aa13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 CD40P25942 277 aa13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 CD70P32970 193 aa13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 Q499Y3 187 aa13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 PRSS3P2Q8NHM4 247 aa13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 C11orf54Q9H0W9 315 aaPredicted RBP13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 LAMP3Q9UQV4 416 aa13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 WASHC3Q9Y3C0 194 aa13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 SPTA1P02549 2419 aa13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 ZNF716A6NP11 495 aa13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 H0YIV9 168 aa13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 AIFM1O95831 613 aa13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 SMN1Q16637 294 aaKnown RBP13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 CYHR1Q6ZMK1 362 aa13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 CLEC14AQ86T13 490 aa13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 ACY3Q96HD9 319 aa13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 DDOQ99489 341 aa13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 SDR39U1Q9NRG7 319 aaPredicted RBP13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 STRAPQ9Y3F4 350 aaKnown RBP13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 SELENOFO60613 162 aa13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 SDC1P18827 310 aa13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 CDCA2Q69YH5 1023 aaPredicted RBP13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 C1QTNF6Q9BXI9 259 aa13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 CGGBP1Q9UFW8 167 aaPredicted RBP13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 ZNF814B7Z6K7 855 aa13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 CHRM2P08172 466 aa13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 DRD1P21728 446 aa13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 ZNF140P52738 457 aaPredicted RBP13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 EIF4E3Q8N5X7 224 aaKnown RBP13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 DYRK2Q92630 601 aa13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 P2RY12Q9H244 342 aa13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 SLC25A32Q9H2D1 315 aa13.43□□□□□ -0.26
SPTLC2-201ENST00000216484 RGPD1P0DJD0 1748 aa13.42□□□□□ -0.26
SPTLC2-201ENST00000216484 SCRG1O75711 98 aa13.42□□□□□ -0.26
SPTLC2-201ENST00000216484 MAP2K6P52564 334 aa13.42□□□□□ -0.26
SPTLC2-201ENST00000216484 DGAT2L7PQ6IED9 249 aa13.42□□□□□ -0.26
SPTLC2-201ENST00000216484 OR2L13Q8N349 312 aa13.42□□□□□ -0.26
SPTLC2-201ENST00000216484 RHOXF1Q8NHV9 184 aa13.42□□□□□ -0.26
SPTLC2-201ENST00000216484 DLL4Q9NR61 685 aa13.42□□□□□ -0.26
SPTLC2-201ENST00000216484 PSENENQ9NZ42 101 aa13.42□□□□□ -0.26
SPTLC2-201ENST00000216484 PXNP49023 591 aaPredicted RBP13.42□□□□□ -0.26
SPTLC2-201ENST00000216484 CDCP1Q9H5V8 836 aa13.42□□□□□ -0.26
SPTLC2-201ENST00000216484 LMO7Q8WWI1 1683 aa13.42□□□□□ -0.26
SPTLC2-201ENST00000216484 CNN1P51911 297 aaKnown RBP13.42□□□□□ -0.26
SPTLC2-201ENST00000216484 C7orf43Q8WVR3 580 aa13.42□□□□□ -0.26
SPTLC2-201ENST00000216484 IGSF21Q96ID5 467 aa13.42□□□□□ -0.26
SPTLC2-201ENST00000216484 SLC22A12Q96S37 553 aa13.42□□□□□ -0.26
SPTLC2-201ENST00000216484 CLDN24A6NM45 220 aa13.42□□□□□ -0.26
SPTLC2-201ENST00000216484 NUDT19A8MXV4 375 aa13.42□□□□□ -0.26
SPTLC2-201ENST00000216484 Q3ZCU0 254 aa13.42□□□□□ -0.26
SPTLC2-201ENST00000216484 TDRD15B5MCY1 1934 aaKnown RBP13.42□□□□□ -0.26
SPTLC2-201ENST00000216484 TRABD2BA6NFA1 517 aa13.42□□□□□ -0.26
SPTLC2-201ENST00000216484 UTS2O95399 124 aa13.42□□□□□ -0.26
SPTLC2-201ENST00000216484 DUS4LO95620 317 aaKnown RBP13.42□□□□□ -0.26
SPTLC2-201ENST00000216484 SNHG28P0DPA3 235 aa13.42□□□□□ -0.26
SPTLC2-201ENST00000216484 CD200P41217 278 aa13.42□□□□□ -0.26
SPTLC2-201ENST00000216484 BTNL3Q6UXE8 466 aa13.42□□□□□ -0.26
SPTLC2-201ENST00000216484 ACOT7LQ6ZUV0 252 aa13.42□□□□□ -0.26
SPTLC2-201ENST00000216484 MED17Q9NVC6 651 aa13.42□□□□□ -0.26
SPTLC2-201ENST00000216484 B3GALT5Q9Y2C3 310 aa13.42□□□□□ -0.26
SPTLC2-201ENST00000216484 SALL3Q9BXA9 1300 aa13.42□□□□□ -0.26
SPTLC2-201ENST00000216484 ARFGEF3Q5TH69 2177 aa13.42□□□□□ -0.26
SPTLC2-201ENST00000216484 ZNF840PA6NDX5 716 aa13.42□□□□□ -0.26
SPTLC2-201ENST00000216484 DNASE2O00115 360 aaPredicted RBP13.42□□□□□ -0.26
SPTLC2-201ENST00000216484 CR2P20023 1033 aa13.42□□□□□ -0.26
SPTLC2-201ENST00000216484 HIST1H1TP22492 207 aaPredicted RBP13.42□□□□□ -0.26
SPTLC2-201ENST00000216484 EID2Q8N6I1 236 aa13.42□□□□□ -0.26
SPTLC2-201ENST00000216484 FBXO27Q8NI29 283 aa13.42□□□□□ -0.26
SPTLC2-201ENST00000216484 TTC9Q92623 222 aa13.42□□□□□ -0.26
SPTLC2-201ENST00000216484 MYADML2A6NDP7 307 aa13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 ZNF487B1APH4 448 aa13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 DCDP81605 110 aaKnown RBP13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 RRP8O43159 456 aaKnown RBP13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 KCNJ10P78508 379 aa13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 FUT2Q10981 343 aa13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 MBOAT2Q6ZWT7 520 aa13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 ZNF2Q9BSG1 426 aaPredicted RBP13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 MRPL13Q9BYD1 178 aaKnown RBP13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 SOCS7O14512 581 aa13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 Q6ZN92 141 aa13.41□□□□□ -0.26
SPTLC2-201ENST00000216484 ZBTB44Q8NCP5 570 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms