RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 CTSSP25774 331 aa12.67□□□□□ -0.38
RTFDC1-201ENST00000023939 CDAP32320 146 aa12.67□□□□□ -0.38
RTFDC1-201ENST00000023939 RRADP55042 308 aa12.67□□□□□ -0.38
RTFDC1-201ENST00000023939 CLDN15P56746 228 aa12.67□□□□□ -0.38
RTFDC1-201ENST00000023939 PSMA6P60900 246 aaKnown RBP12.67□□□□□ -0.38
RTFDC1-201ENST00000023939 ODF4Q2M2E3 257 aa12.67□□□□□ -0.38
RTFDC1-201ENST00000023939 PDSS1Q5T2R2 415 aa12.67□□□□□ -0.38
RTFDC1-201ENST00000023939 BCL2L15Q5TBC7 163 aa12.67□□□□□ -0.38
RTFDC1-201ENST00000023939 ASPHD2Q6ICH7 369 aa12.67□□□□□ -0.38
RTFDC1-201ENST00000023939 GALNT16Q8N428 558 aa12.67□□□□□ -0.38
RTFDC1-201ENST00000023939 OR10D3Q8NH80 312 aa12.67□□□□□ -0.38
RTFDC1-201ENST00000023939 RAB40AQ8WXH6 277 aa12.67□□□□□ -0.38
RTFDC1-201ENST00000023939 TRIM63Q969Q1 353 aa12.67□□□□□ -0.38
RTFDC1-201ENST00000023939 CPNE4Q96A23 557 aaPredicted RBP12.67□□□□□ -0.38
RTFDC1-201ENST00000023939 ABHD1Q96SE0 405 aa12.67□□□□□ -0.38
RTFDC1-201ENST00000023939 LIN7BQ9HAP6 207 aa12.67□□□□□ -0.38
RTFDC1-201ENST00000023939 PNRC2Q9NPJ4 139 aaKnown RBP12.67□□□□□ -0.38
RTFDC1-201ENST00000023939 NUFIP1Q9UHK0 495 aaKnown RBP12.67□□□□□ -0.38
RTFDC1-201ENST00000023939 GTF2A1LQ9UNN4 478 aa12.67□□□□□ -0.38
RTFDC1-201ENST00000023939 POLR1DQ9Y2S0 133 aa12.67□□□□□ -0.38
RTFDC1-201ENST00000023939 KLF13Q9Y2Y9 288 aaPredicted RBP12.67□□□□□ -0.38
RTFDC1-201ENST00000023939 FLVCR1Q9Y5Y0 555 aa12.67□□□□□ -0.38
RTFDC1-201ENST00000023939 WDR87Q6ZQQ6 2873 aa12.67□□□□□ -0.38
RTFDC1-201ENST00000023939 LOC107986453A0A1B0GWG9 222 aa12.66□□□□□ -0.38
RTFDC1-201ENST00000023939 OR5H15A6NDH6 313 aa12.66□□□□□ -0.38
RTFDC1-201ENST00000023939 GSTZ1O43708 216 aaPredicted RBP12.66□□□□□ -0.38
RTFDC1-201ENST00000023939 CXCL13O43927 109 aa12.66□□□□□ -0.38
RTFDC1-201ENST00000023939 NME2P1O60361 137 aa12.66□□□□□ -0.38
RTFDC1-201ENST00000023939 F10P00742 488 aa12.66□□□□□ -0.38
RTFDC1-201ENST00000023939 HNRNPCP07910 306 aaKnown RBP eCLIP12.66□□□□□ -0.38
RTFDC1-201ENST00000023939 LIPCP11150 499 aa12.66□□□□□ -0.38
RTFDC1-201ENST00000023939 NME2P22392 152 aa12.66□□□□□ -0.38
RTFDC1-201ENST00000023939 MNDAP41218 407 aa12.66□□□□□ -0.38
RTFDC1-201ENST00000023939 MMP15P51511 669 aa12.66□□□□□ -0.38
RTFDC1-201ENST00000023939 HIST1H3AP68431 136 aa12.66□□□□□ -0.38
RTFDC1-201ENST00000023939 PHYHD1Q5SRE7 291 aa12.66□□□□□ -0.38
RTFDC1-201ENST00000023939 HIST2H3PS2Q5TEC6 136 aa12.66□□□□□ -0.38
RTFDC1-201ENST00000023939 MZT2BQ6NZ67 158 aa12.66□□□□□ -0.38
RTFDC1-201ENST00000023939 HIST2H3AQ71DI3 136 aa12.66□□□□□ -0.38
RTFDC1-201ENST00000023939 CMTM4Q8IZR5 234 aa12.66□□□□□ -0.38
RTFDC1-201ENST00000023939 RFT1Q96AA3 541 aa12.66□□□□□ -0.38
RTFDC1-201ENST00000023939 SLC25A38Q96DW6 304 aa12.66□□□□□ -0.38
RTFDC1-201ENST00000023939 SMAD5Q99717 465 aaKnown RBP12.66□□□□□ -0.38
RTFDC1-201ENST00000023939 THAP7Q9BT49 309 aaPredicted RBP12.66□□□□□ -0.38
RTFDC1-201ENST00000023939 IRF2BPLQ9H1B7 796 aa12.66□□□□□ -0.38
RTFDC1-201ENST00000023939 NELFAQ9H3P2 528 aa12.66□□□□□ -0.38
RTFDC1-201ENST00000023939 DDX28Q9NUL7 540 aaKnown RBP12.66□□□□□ -0.38
RTFDC1-201ENST00000023939 RBFOX1Q9NWB1 397 aaKnown RBP12.66□□□□□ -0.38
RTFDC1-201ENST00000023939 ASH2LQ9UBL3 628 aa12.66□□□□□ -0.38
RTFDC1-201ENST00000023939 CKLFQ9UBR5 152 aa12.66□□□□□ -0.38
RTFDC1-201ENST00000023939 OR5V1Q9UGF6 321 aa12.66□□□□□ -0.38
RTFDC1-201ENST00000023939 STEAP1Q9UHE8 339 aa12.66□□□□□ -0.38
RTFDC1-201ENST00000023939 MEGF11A6BM72 1044 aa12.65□□□□□ -0.38
RTFDC1-201ENST00000023939 CYTIPO60759 359 aa12.65□□□□□ -0.38
RTFDC1-201ENST00000023939 TTRP02766 147 aa12.65□□□□□ -0.38
RTFDC1-201ENST00000023939 SP1P08047 785 aa12.65□□□□□ -0.38
RTFDC1-201ENST00000023939 PRKAR1AP10644 381 aa12.65□□□□□ -0.38
RTFDC1-201ENST00000023939 GUCA1AP43080 201 aaPredicted RBP12.65□□□□□ -0.38
RTFDC1-201ENST00000023939 MAP2K3P46734 347 aa12.65□□□□□ -0.38
RTFDC1-201ENST00000023939 STARP49675 285 aa12.65□□□□□ -0.38
RTFDC1-201ENST00000023939 MRPS34P82930 218 aaKnown RBP12.65□□□□□ -0.38
RTFDC1-201ENST00000023939 MADCAM1Q13477 382 aa12.65□□□□□ -0.38
RTFDC1-201ENST00000023939 FAM166AQ6J272 317 aa12.65□□□□□ -0.38
RTFDC1-201ENST00000023939 SLC25A25Q6KCM7 469 aa12.65□□□□□ -0.38
RTFDC1-201ENST00000023939 LINC00696Q6ZRV3 163 aa12.65□□□□□ -0.38
RTFDC1-201ENST00000023939 DUSP18Q8NEJ0 188 aa12.65□□□□□ -0.38
RTFDC1-201ENST00000023939 NABP1Q96AH0 204 aa12.65□□□□□ -0.38
RTFDC1-201ENST00000023939 AGAP4Q96P64 663 aa12.65□□□□□ -0.38
RTFDC1-201ENST00000023939 NEDD4LQ96PU5 975 aa12.65□□□□□ -0.38
RTFDC1-201ENST00000023939 TTTY12Q9BZ98 90 aa12.65□□□□□ -0.38
RTFDC1-201ENST00000023939 PBOV1Q9GZY1 135 aa12.65□□□□□ -0.38
RTFDC1-201ENST00000023939 PLA2G3Q9NZ20 509 aa12.65□□□□□ -0.38
RTFDC1-201ENST00000023939 NCKAP5O14513 1909 aa12.65□□□□□ -0.38
RTFDC1-201ENST00000023939 KIAA1549Q9HCM3 1950 aa12.65□□□□□ -0.38
RTFDC1-201ENST00000023939 SLC17A2O00624 439 aa12.65□□□□□ -0.38
RTFDC1-201ENST00000023939 LYRM1O43325 122 aa12.65□□□□□ -0.38
RTFDC1-201ENST00000023939 SULT1B1O43704 296 aa12.65□□□□□ -0.38
RTFDC1-201ENST00000023939 MAS1P04201 325 aa12.65□□□□□ -0.38
RTFDC1-201ENST00000023939 ACSM4P0C7M7 580 aa12.65□□□□□ -0.38
RTFDC1-201ENST00000023939 FAM157BP0CG42 384 aa12.65□□□□□ -0.38
RTFDC1-201ENST00000023939 SELENOPP49908 381 aa12.65□□□□□ -0.38
RTFDC1-201ENST00000023939 ZNF84P51523 738 aa12.65□□□□□ -0.38
RTFDC1-201ENST00000023939 GRB2P62993 217 aaKnown RBP12.65□□□□□ -0.38
RTFDC1-201ENST00000023939 ENDOGQ14249 297 aaKnown RBP12.65□□□□□ -0.38
RTFDC1-201ENST00000023939 TGIF1Q15583 401 aa12.65□□□□□ -0.38
RTFDC1-201ENST00000023939 BCL2A1Q16548 175 aa12.65□□□□□ -0.38
RTFDC1-201ENST00000023939 FCRLAQ7L513 359 aa12.65□□□□□ -0.38
RTFDC1-201ENST00000023939 DRAXINQ8NBI3 349 aaPredicted RBP12.65□□□□□ -0.38
RTFDC1-201ENST00000023939 SLC39A7Q92504 469 aa12.65□□□□□ -0.38
RTFDC1-201ENST00000023939 TMEM45BQ96B21 275 aa12.65□□□□□ -0.38
RTFDC1-201ENST00000023939 ITPKCQ96DU7 683 aa12.65□□□□□ -0.38
RTFDC1-201ENST00000023939 ZNF416Q9BWM5 594 aa12.65□□□□□ -0.38
RTFDC1-201ENST00000023939 HES7Q9BYE0 225 aa12.65□□□□□ -0.38
RTFDC1-201ENST00000023939 NPAP1Q9NZP6 1156 aa12.65□□□□□ -0.38
RTFDC1-201ENST00000023939 FRYLO94915 3013 aa12.65□□□□□ -0.39
RTFDC1-201ENST00000023939 MED12Q93074 2177 aa12.64□□□□□ -0.39
RTFDC1-201ENST00000023939 IGKV3D-15A0A087WSY6 115 aa12.64□□□□□ -0.39
RTFDC1-201ENST00000023939 KLRC4-KLRK1H3BQV0 150 aa12.64□□□□□ -0.39
RTFDC1-201ENST00000023939 TM4SF5O14894 197 aa12.64□□□□□ -0.39
RTFDC1-201ENST00000023939 CEACAM1P13688 526 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms