RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 KLHL21Q9UJP4 597 aa22.97■■□□□ 1.27
VEGFA-231ENST00000640499 C5orf49A4QMS7 147 aa22.96■■□□□ 1.27
VEGFA-231ENST00000640499 B9A039 149 aa22.96■■□□□ 1.27
VEGFA-231ENST00000640499 H7C417 338 aa22.96■■□□□ 1.27
VEGFA-231ENST00000640499 RER1O15258 196 aa22.96■■□□□ 1.27
VEGFA-231ENST00000640499 MITFO75030 526 aaPredicted RBP22.96■■□□□ 1.27
VEGFA-231ENST00000640499 PSKH1P11801 424 aa22.96■■□□□ 1.27
VEGFA-231ENST00000640499 APLNRP35414 380 aa22.96■■□□□ 1.27
VEGFA-231ENST00000640499 GGT2P36268 569 aa22.96■■□□□ 1.27
VEGFA-231ENST00000640499 ARHGDIAP52565 204 aa22.96■■□□□ 1.27
VEGFA-231ENST00000640499 SLC25A1P53007 311 aa22.96■■□□□ 1.27
VEGFA-231ENST00000640499 UCP2P55851 309 aa22.96■■□□□ 1.27
VEGFA-231ENST00000640499 GALK2Q01415 458 aa22.96■■□□□ 1.27
VEGFA-231ENST00000640499 TEKQ02763 1124 aa22.96■■□□□ 1.27
VEGFA-231ENST00000640499 CORO6Q6QEF8 472 aa22.96■■□□□ 1.27
VEGFA-231ENST00000640499 ZSCAN2Q7Z7L9 614 aaPredicted RBP22.96■■□□□ 1.27
VEGFA-231ENST00000640499 ZNF101Q8IZC7 436 aa22.96■■□□□ 1.27
VEGFA-231ENST00000640499 SVOPLQ8N434 492 aa22.96■■□□□ 1.27
VEGFA-231ENST00000640499 PTP4A1Q93096 173 aa22.96■■□□□ 1.27
VEGFA-231ENST00000640499 MRPL24Q96A35 216 aaKnown RBP22.96■■□□□ 1.27
VEGFA-231ENST00000640499 TRMT61AQ96FX7 289 aaKnown RBP22.96■■□□□ 1.27
VEGFA-231ENST00000640499 OR51B6Q9H340 312 aa22.96■■□□□ 1.27
VEGFA-231ENST00000640499 MYEF2Q9P2K5 600 aaKnown RBP22.96■■□□□ 1.27
VEGFA-231ENST00000640499 FZR1Q9UM11 496 aa22.96■■□□□ 1.27
VEGFA-231ENST00000640499 SPEF1Q9Y4P9 236 aa22.96■■□□□ 1.27
VEGFA-231ENST00000640499 MED13LQ71F56 2210 aa22.96■■□□□ 1.27
VEGFA-231ENST00000640499 G3V2T6 193 aa22.95■■□□□ 1.26
VEGFA-231ENST00000640499 SYNGR3O43761 229 aa22.95■■□□□ 1.26
VEGFA-231ENST00000640499 GYPBP06028 91 aa22.95■■□□□ 1.26
VEGFA-231ENST00000640499 FCGR1AP12314 374 aa22.95■■□□□ 1.26
VEGFA-231ENST00000640499 ACANP16112 2415 aa22.95■■□□□ 1.26
VEGFA-231ENST00000640499 PCSK6P29122 969 aa22.95■■□□□ 1.26
VEGFA-231ENST00000640499 GLO1Q04760 184 aa22.95■■□□□ 1.26
VEGFA-231ENST00000640499 SCRN3Q0VDG4 424 aa22.95■■□□□ 1.26
VEGFA-231ENST00000640499 TMEM236Q5W0B7 351 aa22.95■■□□□ 1.26
VEGFA-231ENST00000640499 SLC27A4Q6P1M0 643 aa22.95■■□□□ 1.26
VEGFA-231ENST00000640499 HIPK1Q86Z02 1210 aa22.95■■□□□ 1.26
VEGFA-231ENST00000640499 CENPNQ96H22 339 aaPredicted RBP22.95■■□□□ 1.26
VEGFA-231ENST00000640499 PKP2Q99959 881 aa22.95■■□□□ 1.26
VEGFA-231ENST00000640499 GABARAPL1Q9H0R8 117 aa22.95■■□□□ 1.26
VEGFA-231ENST00000640499 DLL4Q9NR61 685 aa22.95■■□□□ 1.26
VEGFA-231ENST00000640499 PAPOLBQ9NRJ5 636 aaKnown RBP22.95■■□□□ 1.26
VEGFA-231ENST00000640499 CMAHPQ9Y471 501 aa22.95■■□□□ 1.26
VEGFA-231ENST00000640499 FLNAP21333 2647 aaKnown RBP22.95■■□□□ 1.26
VEGFA-231ENST00000640499 TEP1Q99973 2627 aaKnown RBP22.94■■□□□ 1.26
VEGFA-231ENST00000640499 OR6C6A6NF89 314 aa22.94■■□□□ 1.26
VEGFA-231ENST00000640499 SGCEO43556 437 aa22.94■■□□□ 1.26
VEGFA-231ENST00000640499 ICMTO60725 284 aa22.94■■□□□ 1.26
VEGFA-231ENST00000640499 COX5BP10606 129 aa22.94■■□□□ 1.26
VEGFA-231ENST00000640499 CCNOP22674 350 aa22.94■■□□□ 1.26
VEGFA-231ENST00000640499 GDI2P50395 445 aaKnown RBP22.94■■□□□ 1.26
VEGFA-231ENST00000640499 RSPO1Q2MKA7 263 aaPredicted RBP22.94■■□□□ 1.26
VEGFA-231ENST00000640499 LINC01590Q5TEZ4 76 aa22.94■■□□□ 1.26
VEGFA-231ENST00000640499 DNM1P46Q6ZS02 220 aa22.94■■□□□ 1.26
VEGFA-231ENST00000640499 ALDH16A1Q8IZ83 802 aa22.94■■□□□ 1.26
VEGFA-231ENST00000640499 PARP8Q8N3A8 854 aa22.94■■□□□ 1.26
VEGFA-231ENST00000640499 OR2T4Q8NH00 348 aa22.94■■□□□ 1.26
VEGFA-231ENST00000640499 SLC7A6Q92536 515 aa22.94■■□□□ 1.26
VEGFA-231ENST00000640499 MED20Q9H944 212 aa22.94■■□□□ 1.26
VEGFA-231ENST00000640499 TVP23AA6NH52 213 aa22.93■■□□□ 1.26
VEGFA-231ENST00000640499 FAM183AA6NL82 134 aa22.93■■□□□ 1.26
VEGFA-231ENST00000640499 DOK2O60496 412 aa22.93■■□□□ 1.26
VEGFA-231ENST00000640499 NGFP01138 241 aa22.93■■□□□ 1.26
VEGFA-231ENST00000640499 SPI1P17947 270 aa22.93■■□□□ 1.26
VEGFA-231ENST00000640499 EPHA2P29317 976 aa22.93■■□□□ 1.26
VEGFA-231ENST00000640499 CRISP1P54107 249 aa22.93■■□□□ 1.26
VEGFA-231ENST00000640499 TMEM255AQ5JRV8 349 aa22.93■■□□□ 1.26
VEGFA-231ENST00000640499 KDM4DQ6B0I6 523 aa22.93■■□□□ 1.26
VEGFA-231ENST00000640499 SLC18B1Q6NT16 456 aa22.93■■□□□ 1.26
VEGFA-231ENST00000640499 CFAP77Q6ZQR2 320 aa22.93■■□□□ 1.26
VEGFA-231ENST00000640499 LINC00346Q8IVM7 164 aa22.93■■□□□ 1.26
VEGFA-231ENST00000640499 ZCCHC24Q8N2G6 241 aaKnown RBP22.93■■□□□ 1.26
VEGFA-231ENST00000640499 ZNF511Q8NB15 262 aa22.93■■□□□ 1.26
VEGFA-231ENST00000640499 PROKR2Q8NFJ6 384 aa22.93■■□□□ 1.26
VEGFA-231ENST00000640499 Q96MF0 132 aa22.93■■□□□ 1.26
VEGFA-231ENST00000640499 SYT3Q9BQG1 590 aa22.93■■□□□ 1.26
VEGFA-231ENST00000640499 SLC25A19Q9HC21 320 aa22.93■■□□□ 1.26
VEGFA-231ENST00000640499 CYB5R1Q9UHQ9 305 aa22.93■■□□□ 1.26
VEGFA-231ENST00000640499 TMEFF2Q9UIK5 374 aaPredicted RBP22.93■■□□□ 1.26
VEGFA-231ENST00000640499 SURF4O15260 269 aa22.92■■□□□ 1.26
VEGFA-231ENST00000640499 ZNF23P17027 643 aa22.92■■□□□ 1.26
VEGFA-231ENST00000640499 SNRPD2P62316 118 aaKnown RBP22.92■■□□□ 1.26
VEGFA-231ENST00000640499 RFPL4BQ6ZWI9 263 aa22.92■■□□□ 1.26
VEGFA-231ENST00000640499 ZDHHC13Q8IUH4 622 aa22.92■■□□□ 1.26
VEGFA-231ENST00000640499 DNAJC9Q8WXX5 260 aa22.92■■□□□ 1.26
VEGFA-231ENST00000640499 SORCS2Q96PQ0 1159 aa22.92■■□□□ 1.26
VEGFA-231ENST00000640499 WDR76Q9H967 626 aa22.92■■□□□ 1.26
VEGFA-231ENST00000640499 PNRC2Q9NPJ4 139 aaKnown RBP22.92■■□□□ 1.26
VEGFA-231ENST00000640499 PLEK2Q9NYT0 353 aa22.92■■□□□ 1.26
VEGFA-231ENST00000640499 OAZ3Q9UMX2 235 aa22.92■■□□□ 1.26
VEGFA-231ENST00000640499 TRIM64A6NGJ6 449 aa22.91■■□□□ 1.26
VEGFA-231ENST00000640499 TRIM64BA6NI03 449 aa22.91■■□□□ 1.26
VEGFA-231ENST00000640499 RIIAD1A6NNX1 92 aa22.91■■□□□ 1.26
VEGFA-231ENST00000640499 LY6HO94772 140 aa22.91■■□□□ 1.26
VEGFA-231ENST00000640499 CLPTM1O96005 669 aa22.91■■□□□ 1.26
VEGFA-231ENST00000640499 IFNGP01579 166 aa22.91■■□□□ 1.26
VEGFA-231ENST00000640499 DBHP09172 617 aa22.91■■□□□ 1.26
VEGFA-231ENST00000640499 ZNF250P15622 560 aa22.91■■□□□ 1.26
VEGFA-231ENST00000640499 RPS27P42677 84 aaKnown RBP22.91■■□□□ 1.26
VEGFA-231ENST00000640499 RAD52P43351 418 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms