RNA–Protein interactions for RNA: ENST00000639809.1

SPIN3-229, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,118 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-229	ENST00000639809	TBCCD1	Q9NVR7	557 aa		13.35	□□□□□ -0.27
SPIN3-229	ENST00000639809	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	13.35	□□□□□ -0.27
SPIN3-229	ENST00000639809	AUP1	Q9Y679	476 aa		13.35	□□□□□ -0.27
SPIN3-229	ENST00000639809	TANC2	Q9HCD6	1990 aa		13.34	□□□□□ -0.27
SPIN3-229	ENST00000639809		A8MXK9	166 aa		13.34	□□□□□ -0.27
SPIN3-229	ENST00000639809	SURF4	O15260	269 aa		13.34	□□□□□ -0.27
SPIN3-229	ENST00000639809	TIMM8A	O60220	97 aa	Predicted RBP	13.34	□□□□□ -0.27
SPIN3-229	ENST00000639809	CCDC22	O60826	627 aa		13.34	□□□□□ -0.27
SPIN3-229	ENST00000639809	NPPA	P01160	153 aa		13.34	□□□□□ -0.27
SPIN3-229	ENST00000639809	ZNF12	P17014	697 aa		13.34	□□□□□ -0.27
SPIN3-229	ENST00000639809	ST3GAL3	Q11203	375 aa		13.34	□□□□□ -0.27
SPIN3-229	ENST00000639809	ZNF154	Q13106	437 aa		13.34	□□□□□ -0.27
SPIN3-229	ENST00000639809	LAPTM4A	Q15012	233 aa		13.34	□□□□□ -0.27
SPIN3-229	ENST00000639809	TMEM255A	Q5JRV8	349 aa		13.34	□□□□□ -0.27
SPIN3-229	ENST00000639809	ERICH5	Q6P6B1	374 aa		13.34	□□□□□ -0.27
SPIN3-229	ENST00000639809	LRRC28	Q86X40	367 aa	Predicted RBP	13.34	□□□□□ -0.27
SPIN3-229	ENST00000639809	DEFB108B	Q8NET1	73 aa		13.34	□□□□□ -0.27
SPIN3-229	ENST00000639809	OR8J3	Q8NGG0	315 aa		13.34	□□□□□ -0.27
SPIN3-229	ENST00000639809	MOSPD2	Q8NHP6	518 aa		13.34	□□□□□ -0.27
SPIN3-229	ENST00000639809	MYLK2	Q9H1R3	596 aa		13.34	□□□□□ -0.27
SPIN3-229	ENST00000639809	PPIAL4A	Q9Y536	164 aa		13.34	□□□□□ -0.27
SPIN3-229	ENST00000639809	PCDHGB1	Q9Y5G3	927 aa		13.34	□□□□□ -0.27
SPIN3-229	ENST00000639809	IGKV1D-43	A0A0B4J1Z2	117 aa		13.33	□□□□□ -0.28
SPIN3-229	ENST00000639809	POM121C	A8CG34	1229 aa		13.33	□□□□□ -0.28
SPIN3-229	ENST00000639809	CLDN34	H7C241	214 aa		13.33	□□□□□ -0.28
SPIN3-229	ENST00000639809	ABHD16A	O95870	558 aa		13.33	□□□□□ -0.28
SPIN3-229	ENST00000639809	SBK2	P0C263	348 aa		13.33	□□□□□ -0.28
SPIN3-229	ENST00000639809	PPIAL4G	P0DN37	164 aa		13.33	□□□□□ -0.28
SPIN3-229	ENST00000639809	MSR1	P21757	451 aa		13.33	□□□□□ -0.28
SPIN3-229	ENST00000639809	ZFP36	P26651	326 aa	Known RBP	13.33	□□□□□ -0.28
SPIN3-229	ENST00000639809	LAP3	P28838	519 aa		13.33	□□□□□ -0.28
SPIN3-229	ENST00000639809	SLC6A9	P48067	706 aa		13.33	□□□□□ -0.28
SPIN3-229	ENST00000639809	IL13RA1	P78552	427 aa		13.33	□□□□□ -0.28
SPIN3-229	ENST00000639809	FMOD	Q06828	376 aa		13.33	□□□□□ -0.28
SPIN3-229	ENST00000639809	PIN1	Q13526	163 aa	Predicted RBP	13.33	□□□□□ -0.28
SPIN3-229	ENST00000639809	NANOGP8	Q6NSW7	305 aa		13.33	□□□□□ -0.28
SPIN3-229	ENST00000639809	CALHM3	Q86XJ0	350 aa		13.33	□□□□□ -0.28
SPIN3-229	ENST00000639809	MUC20	Q8N307	709 aa	Predicted RBP	13.33	□□□□□ -0.28
SPIN3-229	ENST00000639809	SIGLECL1	Q8N7X8	197 aa		13.33	□□□□□ -0.28
SPIN3-229	ENST00000639809	GEMIN6	Q8WXD5	167 aa	Known RBP	13.33	□□□□□ -0.28
SPIN3-229	ENST00000639809	ECSIT	Q9BQ95	431 aa		13.33	□□□□□ -0.28
SPIN3-229	ENST00000639809	IL19	Q9UHD0	177 aa		13.33	□□□□□ -0.28
SPIN3-229	ENST00000639809	IL20RA	Q9UHF4	553 aa		13.33	□□□□□ -0.28
SPIN3-229	ENST00000639809	INSIG2	Q9Y5U4	225 aa		13.33	□□□□□ -0.28
SPIN3-229	ENST00000639809		J3QW42	95 aa		13.32	□□□□□ -0.28
SPIN3-229	ENST00000639809	SLC22A2	O15244	555 aa		13.32	□□□□□ -0.28
SPIN3-229	ENST00000639809	AHCYL1	O43865	530 aa		13.32	□□□□□ -0.28
SPIN3-229	ENST00000639809	NGF	P01138	241 aa		13.32	□□□□□ -0.28
SPIN3-229	ENST00000639809	KITLG	P21583	273 aa		13.32	□□□□□ -0.28
SPIN3-229	ENST00000639809	BTG1	P62324	171 aa		13.32	□□□□□ -0.28
SPIN3-229	ENST00000639809	SCRN3	Q0VDG4	424 aa		13.32	□□□□□ -0.28
SPIN3-229	ENST00000639809	PSG7	Q13046	419 aa		13.32	□□□□□ -0.28
SPIN3-229	ENST00000639809	ESCO2	Q56NI9	601 aa		13.32	□□□□□ -0.28
SPIN3-229	ENST00000639809	COQ5	Q5HYK3	327 aa		13.32	□□□□□ -0.28
SPIN3-229	ENST00000639809	C22orf15	Q8WYQ4	148 aa		13.32	□□□□□ -0.28
SPIN3-229	ENST00000639809	SLC25A28	Q96A46	364 aa		13.32	□□□□□ -0.28
SPIN3-229	ENST00000639809	BPIFA2	Q96DR5	249 aa		13.32	□□□□□ -0.28
SPIN3-229	ENST00000639809	MSL2	Q9HCI7	577 aa		13.32	□□□□□ -0.28
SPIN3-229	ENST00000639809	ARMCX1	Q9P291	453 aa		13.32	□□□□□ -0.28
SPIN3-229	ENST00000639809	EGFL7	Q9UHF1	273 aa		13.32	□□□□□ -0.28
SPIN3-229	ENST00000639809	LRCH1	Q9Y2L9	728 aa		13.32	□□□□□ -0.28
SPIN3-229	ENST00000639809	CAPN7	Q9Y6W3	813 aa		13.32	□□□□□ -0.28
SPIN3-229	ENST00000639809	DNAJC9-AS1	A6NH13	148 aa		13.31	□□□□□ -0.28
SPIN3-229	ENST00000639809		F5H0A9	414 aa	Predicted RBP	13.31	□□□□□ -0.28
SPIN3-229	ENST00000639809	RNASE1	P07998	156 aa	Known RBP	13.31	□□□□□ -0.28
SPIN3-229	ENST00000639809	MDH2	P40926	338 aa	Known RBP	13.31	□□□□□ -0.28
SPIN3-229	ENST00000639809	MTNR1A	P48039	350 aa		13.31	□□□□□ -0.28
SPIN3-229	ENST00000639809	CTXN1	P60606	82 aa		13.31	□□□□□ -0.28
SPIN3-229	ENST00000639809	KLF10	Q13118	480 aa		13.31	□□□□□ -0.28
SPIN3-229	ENST00000639809	TOP3A	Q13472	1001 aa	Predicted RBP	13.31	□□□□□ -0.28
SPIN3-229	ENST00000639809	ENDOG	Q14249	297 aa	Known RBP	13.31	□□□□□ -0.28
SPIN3-229	ENST00000639809	ZNF774	Q6NX45	483 aa		13.31	□□□□□ -0.28
SPIN3-229	ENST00000639809	SLC27A4	Q6P1M0	643 aa		13.31	□□□□□ -0.28
SPIN3-229	ENST00000639809	C9orf139	Q6ZV77	190 aa		13.31	□□□□□ -0.28
SPIN3-229	ENST00000639809	FAM156A	Q8NDB6	213 aa		13.31	□□□□□ -0.28
SPIN3-229	ENST00000639809	PRRC1	Q96M27	445 aa		13.31	□□□□□ -0.28
SPIN3-229	ENST00000639809	POLE4	Q9NR33	117 aa		13.31	□□□□□ -0.28
SPIN3-229	ENST00000639809	MMP26	Q9NRE1	261 aa		13.31	□□□□□ -0.28
SPIN3-229	ENST00000639809	ZNF69	Q9UC07	566 aa		13.31	□□□□□ -0.28
SPIN3-229	ENST00000639809	OR5V1	Q9UGF6	321 aa		13.31	□□□□□ -0.28
SPIN3-229	ENST00000639809	PPP1R3C	Q9UQK1	317 aa		13.31	□□□□□ -0.28
SPIN3-229	ENST00000639809		A0A1W2PPL8	197 aa		13.3	□□□□□ -0.28
SPIN3-229	ENST00000639809	TRAPPC2L	H3BP13	241 aa		13.3	□□□□□ -0.28
SPIN3-229	ENST00000639809	FSTL3	O95633	263 aa		13.3	□□□□□ -0.28
SPIN3-229	ENST00000639809	IFI30	P13284	250 aa		13.3	□□□□□ -0.28
SPIN3-229	ENST00000639809	SLC9A3	P48764	834 aa		13.3	□□□□□ -0.28
SPIN3-229	ENST00000639809	BAMBI	Q13145	260 aa		13.3	□□□□□ -0.28
SPIN3-229	ENST00000639809	ZNF771	Q7L3S4	317 aa	Predicted RBP	13.3	□□□□□ -0.28
SPIN3-229	ENST00000639809	RNF113B	Q8IZP6	322 aa	Known RBP	13.3	□□□□□ -0.28
SPIN3-229	ENST00000639809	FITM2	Q8N6M3	262 aa		13.3	□□□□□ -0.28
SPIN3-229	ENST00000639809	LRRC75A	Q8NAA5	344 aa		13.3	□□□□□ -0.28
SPIN3-229	ENST00000639809	OR2Z1	Q8NG97	314 aa		13.3	□□□□□ -0.28
SPIN3-229	ENST00000639809	HAVCR1	Q96D42	359 aa		13.3	□□□□□ -0.28
SPIN3-229	ENST00000639809	DCLRE1C	Q96SD1	692 aa	Known RBP	13.3	□□□□□ -0.28
SPIN3-229	ENST00000639809	NDEL1	Q9GZM8	345 aa		13.3	□□□□□ -0.28
SPIN3-229	ENST00000639809	MS4A7	Q9GZW8	240 aa	Predicted RBP	13.3	□□□□□ -0.28
SPIN3-229	ENST00000639809	SLITRK2	Q9H156	845 aa		13.3	□□□□□ -0.28
SPIN3-229	ENST00000639809	ATPIF1	Q9UII2	106 aa		13.3	□□□□□ -0.28
SPIN3-229	ENST00000639809	PKD1L1	Q8TDX9	2849 aa		13.29	□□□□□ -0.28
SPIN3-229	ENST00000639809	ARHGAP32	A7KAX9	2087 aa		13.29	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 26 ms