RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 ABHD6Q9BV23 337 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 MMP17Q9ULZ9 603 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 LRP12Q9Y561 859 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 PIAS3Q9Y6X2 628 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 R4GMQ9 66 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 THADAQ6YHU6 1953 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 TTC28Q96AY4 2481 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 TCRBV16S1A1N1A0A5B0 115 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 TSPAN2O60636 221 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 SLC16A7O60669 478 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 SLC25A12O75746 678 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 OR2F2O95006 317 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 OR6A2O95222 327 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 SPDEFO95238 335 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 CYB5AP00167 134 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 AMY2AP04746 511 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 CTLA4P16410 223 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 RAB6AP20340 208 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 ADAM8P78325 824 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 PMPCAQ10713 525 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 OR2F1Q13607 317 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 MEF2DQ14814 521 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 NR0B2Q15466 257 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 TOMM34Q15785 309 aaPredicted RBP13.06□□□□□ -0.32
CLN6-215ENST00000636674 GLYATL3Q5SZD4 288 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 ZNF546Q86UE3 836 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 TMEM151BQ8IW70 566 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 BEST3Q8N1M1 668 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 NKAIN3Q8N8D7 197 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 OR52H1Q8NGJ2 320 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 SLC25A44Q96H78 314 aaPredicted RBP13.06□□□□□ -0.32
CLN6-215ENST00000636674 TINAGL1Q9GZM7 467 aaPredicted RBP13.06□□□□□ -0.32
CLN6-215ENST00000636674 PNO1Q9NRX1 252 aaKnown RBP13.06□□□□□ -0.32
CLN6-215ENST00000636674 CLEC1BQ9P126 229 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 GPN3Q9UHW5 284 aaPredicted RBP13.06□□□□□ -0.32
CLN6-215ENST00000636674 HHLA2Q9UM44 414 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 TNFSF18Q9UNG2 199 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 RHBDD3Q9Y3P4 386 aa13.06□□□□□ -0.32
CLN6-215ENST00000636674 MRPS18BQ9Y676 258 aaKnown RBP13.06□□□□□ -0.32
CLN6-215ENST00000636674 TDRD6O60522 2096 aaKnown RBP13.05□□□□□ -0.32
CLN6-215ENST00000636674 ZNF736B4DX44 427 aaPredicted RBP13.05□□□□□ -0.32
CLN6-215ENST00000636674 LGALS8O00214 317 aa13.05□□□□□ -0.32
CLN6-215ENST00000636674 GP1BBP13224 206 aa13.05□□□□□ -0.32
CLN6-215ENST00000636674 IL12BP29460 328 aa13.05□□□□□ -0.32
CLN6-215ENST00000636674 CRABP1P29762 137 aa13.05□□□□□ -0.32
CLN6-215ENST00000636674 POLR2HP52434 150 aaKnown RBP13.05□□□□□ -0.32
CLN6-215ENST00000636674 DHRS2Q13268 280 aa13.05□□□□□ -0.32
CLN6-215ENST00000636674 EIF2B1Q14232 305 aaKnown RBP13.05□□□□□ -0.32
CLN6-215ENST00000636674 MELKQ14680 651 aa13.05□□□□□ -0.32
CLN6-215ENST00000636674 EBPQ15125 230 aaKnown RBP13.05□□□□□ -0.32
CLN6-215ENST00000636674 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.05□□□□□ -0.32
CLN6-215ENST00000636674 STPG2Q8N412 459 aa13.05□□□□□ -0.32
CLN6-215ENST00000636674 OR1J2Q8NGS2 313 aa13.05□□□□□ -0.32
CLN6-215ENST00000636674 OR13C8Q8NGS7 320 aa13.05□□□□□ -0.32
CLN6-215ENST00000636674 PHYHIPLQ96FC7 376 aa13.05□□□□□ -0.32
CLN6-215ENST00000636674 OR8D2Q9GZM6 311 aa13.05□□□□□ -0.32
CLN6-215ENST00000636674 BARX1Q9HBU1 254 aaPredicted RBP13.05□□□□□ -0.32
CLN6-215ENST00000636674 RYDENQ9NUL5 291 aaKnown RBP13.05□□□□□ -0.32
CLN6-215ENST00000636674 CUL9Q8IWT3 2517 aa13.05□□□□□ -0.32
CLN6-215ENST00000636674 OR5H14A6NHG9 310 aa13.05□□□□□ -0.32
CLN6-215ENST00000636674 TOR1AO14656 332 aa13.05□□□□□ -0.32
CLN6-215ENST00000636674 ALOX12BO75342 701 aa13.05□□□□□ -0.32
CLN6-215ENST00000636674 GLO1Q04760 184 aa13.05□□□□□ -0.32
CLN6-215ENST00000636674 ELAVL1Q15717 326 aaKnown RBP13.05□□□□□ -0.32
CLN6-215ENST00000636674 JMJD6Q6NYC1 403 aaPredicted RBP13.05□□□□□ -0.32
CLN6-215ENST00000636674 C5orf46Q6UWT4 87 aa13.05□□□□□ -0.32
CLN6-215ENST00000636674 MOB3CQ70IA8 216 aa13.05□□□□□ -0.32
CLN6-215ENST00000636674 ZNF627Q7L945 461 aa13.05□□□□□ -0.32
CLN6-215ENST00000636674 AQP3Q92482 292 aa13.05□□□□□ -0.32
CLN6-215ENST00000636674 PPP1R14AQ96A00 147 aa13.05□□□□□ -0.32
CLN6-215ENST00000636674 CD207Q9UJ71 328 aa13.05□□□□□ -0.32
CLN6-215ENST00000636674 FBXL2Q9UKC9 423 aa13.05□□□□□ -0.32
CLN6-215ENST00000636674 KLK13Q9UKR3 277 aa13.05□□□□□ -0.32
CLN6-215ENST00000636674 GTF2A1LQ9UNN4 478 aa13.05□□□□□ -0.32
CLN6-215ENST00000636674 A0A0C4DFX4 3053 aa13.05□□□□□ -0.32
CLN6-215ENST00000636674 KIF26BQ2KJY2 2108 aa13.04□□□□□ -0.32
CLN6-215ENST00000636674 TMED7-TICAM2A0A0A6YYA0 188 aa13.04□□□□□ -0.32
CLN6-215ENST00000636674 TLCD2A6NGC4 264 aa13.04□□□□□ -0.32
CLN6-215ENST00000636674 A8MVM7 634 aa13.04□□□□□ -0.32
CLN6-215ENST00000636674 M0QYG6 137 aa13.04□□□□□ -0.32
CLN6-215ENST00000636674 BCL2L11O43521 198 aa13.04□□□□□ -0.32
CLN6-215ENST00000636674 PLGP00747 810 aaPredicted RBP13.04□□□□□ -0.32
CLN6-215ENST00000636674 IL2RAP01589 272 aa13.04□□□□□ -0.32
CLN6-215ENST00000636674 SMAD4Q13485 552 aaKnown RBP13.04□□□□□ -0.32
CLN6-215ENST00000636674 PCK2Q16822 640 aa13.04□□□□□ -0.32
CLN6-215ENST00000636674 RAB12Q6IQ22 244 aa13.04□□□□□ -0.32
CLN6-215ENST00000636674 PTCRAQ6ISU1 281 aaPredicted RBP13.04□□□□□ -0.32
CLN6-215ENST00000636674 C11orf87Q6NUJ2 197 aa13.04□□□□□ -0.32
CLN6-215ENST00000636674 PAPD4Q6PIY7 484 aaKnown RBP13.04□□□□□ -0.32
CLN6-215ENST00000636674 TMED4Q7Z7H5 227 aa13.04□□□□□ -0.32
CLN6-215ENST00000636674 PRR22Q8IZ63 422 aa13.04□□□□□ -0.32
CLN6-215ENST00000636674 BPIFB2Q8N4F0 458 aa13.04□□□□□ -0.32
CLN6-215ENST00000636674 FOXRED1Q96CU9 486 aaPredicted RBP13.04□□□□□ -0.32
CLN6-215ENST00000636674 PRRT1Q99946 306 aa13.04□□□□□ -0.32
CLN6-215ENST00000636674 NUDT9Q9BW91 350 aa13.04□□□□□ -0.32
CLN6-215ENST00000636674 MS4A7Q9GZW8 240 aaPredicted RBP13.04□□□□□ -0.32
CLN6-215ENST00000636674 C8orf33Q9H7E9 229 aaPredicted RBP13.04□□□□□ -0.32
CLN6-215ENST00000636674 TMED7Q9Y3B3 224 aa13.04□□□□□ -0.32
CLN6-215ENST00000636674 CACNA1CQ13936 2221 aa13.04□□□□□ -0.32
CLN6-215ENST00000636674 OR14I1A6ND48 311 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms