RNA–Protein interactions for RNA: ENST00000635914.1

UBE3A-224, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 9,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-224ENST00000635914 C9orf135Q5VTT2 229 aa12.72□□□□□ -0.37
UBE3A-224ENST00000635914 CBY1Q9Y3M2 126 aa12.72□□□□□ -0.37
UBE3A-224ENST00000635914 K7ERQ8 282 aa12.72□□□□□ -0.37
UBE3A-224ENST00000635914 TMEM127O75204 238 aa12.72□□□□□ -0.37
UBE3A-224ENST00000635914 F13BP05160 661 aa12.72□□□□□ -0.37
UBE3A-224ENST00000635914 RAB1AP62820 205 aa12.72□□□□□ -0.37
UBE3A-224ENST00000635914 ZNF90Q03938 601 aa12.72□□□□□ -0.37
UBE3A-224ENST00000635914 OPCMLQ14982 345 aa12.72□□□□□ -0.37
UBE3A-224ENST00000635914 NPWQ8N729 165 aa12.72□□□□□ -0.37
UBE3A-224ENST00000635914 MARC2Q969Z3 335 aa12.72□□□□□ -0.37
UBE3A-224ENST00000635914 A0A0B4J203 849 aa12.72□□□□□ -0.37
UBE3A-224ENST00000635914 TEX50A0A1B0GTY4 177 aa12.72□□□□□ -0.37
UBE3A-224ENST00000635914 GPR55Q9Y2T6 319 aaPredicted RBP12.72□□□□□ -0.37
UBE3A-224ENST00000635914 LINC01387J3KSC0 135 aa12.72□□□□□ -0.37
UBE3A-224ENST00000635914 TRAPPC2P0DI81 140 aa12.72□□□□□ -0.37
UBE3A-224ENST00000635914 TRAPPC2BP0DI82 140 aa12.72□□□□□ -0.37
UBE3A-224ENST00000635914 LIPCP11150 499 aa12.72□□□□□ -0.37
UBE3A-224ENST00000635914 COX5AP20674 150 aa12.72□□□□□ -0.37
UBE3A-224ENST00000635914 KIAA1024LP59773 190 aa12.72□□□□□ -0.37
UBE3A-224ENST00000635914 B3GNT8Q7Z7M8 397 aa12.72□□□□□ -0.37
UBE3A-224ENST00000635914 NEIL1Q96FI4 390 aaPredicted RBP12.72□□□□□ -0.37
UBE3A-224ENST00000635914 C12orf49Q9H741 205 aa12.72□□□□□ -0.37
UBE3A-224ENST00000635914 UFSP2Q9NUQ7 469 aa12.72□□□□□ -0.37
UBE3A-224ENST00000635914 TMED7-TICAM2A0A0A6YYA0 188 aa12.72□□□□□ -0.37
UBE3A-224ENST00000635914 TMEM189-UBE2V1I3L0A0 370 aa12.72□□□□□ -0.37
UBE3A-224ENST00000635914 TO15178 435 aa12.72□□□□□ -0.37
UBE3A-224ENST00000635914 HCRTR1O43613 425 aa12.72□□□□□ -0.37
UBE3A-224ENST00000635914 CD1CP29017 333 aa12.72□□□□□ -0.37
UBE3A-224ENST00000635914 RBP2P50120 134 aa12.72□□□□□ -0.37
UBE3A-224ENST00000635914 DOC2BQ14184 412 aa12.72□□□□□ -0.37
UBE3A-224ENST00000635914 Q8IYB0 196 aa12.72□□□□□ -0.37
UBE3A-224ENST00000635914 TMED7Q9Y3B3 224 aa12.72□□□□□ -0.37
UBE3A-224ENST00000635914 HS3ST3A1Q9Y663 406 aa12.72□□□□□ -0.37
UBE3A-224ENST00000635914 ATP23Q9Y6H3 246 aa12.72□□□□□ -0.37
UBE3A-224ENST00000635914 CNMDO75829 334 aa12.72□□□□□ -0.37
UBE3A-224ENST00000635914 CALCRP30988 508 aa12.72□□□□□ -0.37
UBE3A-224ENST00000635914 ZXDBP98169 803 aa12.72□□□□□ -0.37
UBE3A-224ENST00000635914 UBAC2Q8NBM4 344 aa12.72□□□□□ -0.37
UBE3A-224ENST00000635914 OR10G3Q8NGC4 313 aa12.72□□□□□ -0.37
UBE3A-224ENST00000635914 TIMM10BQ9Y5J6 103 aa12.72□□□□□ -0.37
UBE3A-224ENST00000635914 TRGV10A0A0A0MS01 117 aa12.71□□□□□ -0.37
UBE3A-224ENST00000635914 ARNTLO00327 626 aa12.71□□□□□ -0.37
UBE3A-224ENST00000635914 ST8SIA3O43173 380 aa12.71□□□□□ -0.37
UBE3A-224ENST00000635914 GDNFP39905 211 aa12.71□□□□□ -0.37
UBE3A-224ENST00000635914 CLN3Q13286 438 aa12.71□□□□□ -0.37
UBE3A-224ENST00000635914 SLC17A1Q14916 467 aa12.71□□□□□ -0.37
UBE3A-224ENST00000635914 POM121L2Q96KW2 1035 aa12.71□□□□□ -0.37
UBE3A-224ENST00000635914 PRDM4Q9UKN5 801 aa12.71□□□□□ -0.37
UBE3A-224ENST00000635914 SLC6A11P48066 632 aa12.71□□□□□ -0.37
UBE3A-224ENST00000635914 SLC38A6Q8IZM9 456 aa12.71□□□□□ -0.37
UBE3A-224ENST00000635914 MRPS24Q96EL2 167 aaKnown RBP12.71□□□□□ -0.37
UBE3A-224ENST00000635914 CTDSP1Q9GZU7 261 aa12.71□□□□□ -0.37
UBE3A-224ENST00000635914 H0YIV9 168 aa12.71□□□□□ -0.37
UBE3A-224ENST00000635914 OR2F2O95006 317 aa12.71□□□□□ -0.37
UBE3A-224ENST00000635914 OR2F1Q13607 317 aa12.71□□□□□ -0.37
UBE3A-224ENST00000635914 BEX5Q5H9J7 111 aa12.71□□□□□ -0.37
UBE3A-224ENST00000635914 C14orf79Q96F83 325 aa12.71□□□□□ -0.37
UBE3A-224ENST00000635914 ZMAT5Q9UDW3 170 aaKnown RBP12.71□□□□□ -0.37
UBE3A-224ENST00000635914 XRCC2O43543 280 aa12.71□□□□□ -0.37
UBE3A-224ENST00000635914 NID1P14543 1247 aa12.71□□□□□ -0.37
UBE3A-224ENST00000635914 NKX2-1P43699 371 aaPredicted RBP12.71□□□□□ -0.37
UBE3A-224ENST00000635914 REEP5Q00765 189 aa12.71□□□□□ -0.37
UBE3A-224ENST00000635914 C12orf76Q8N812 135 aaPredicted RBP12.71□□□□□ -0.37
UBE3A-224ENST00000635914 MENTQ9BUN1 341 aa12.71□□□□□ -0.37
UBE3A-224ENST00000635914 TXLNGYQ9BZA5 131 aa12.71□□□□□ -0.37
UBE3A-224ENST00000635914 UBE2ZQ9H832 354 aaPredicted RBP12.71□□□□□ -0.37
UBE3A-224ENST00000635914 AMMECR1Q9Y4X0 333 aaPredicted RBP12.71□□□□□ -0.37
UBE3A-224ENST00000635914 ARL2-SNX15V9GYD0 113 aa12.71□□□□□ -0.37
UBE3A-224ENST00000635914 GVINP1Q7Z2Y8 2422 aa12.71□□□□□ -0.37
UBE3A-224ENST00000635914 CNN1P51911 297 aaKnown RBP12.71□□□□□ -0.37
UBE3A-224ENST00000635914 HSF1Q00613 529 aa12.71□□□□□ -0.37
UBE3A-224ENST00000635914 SLC35D2Q76EJ3 337 aa12.71□□□□□ -0.37
UBE3A-224ENST00000635914 ELLP55199 621 aaPredicted RBP12.71□□□□□ -0.38
UBE3A-224ENST00000635914 SLC5A12Q1EHB4 618 aa12.71□□□□□ -0.38
UBE3A-224ENST00000635914 RPL3LQ92901 407 aaKnown RBP12.71□□□□□ -0.38
UBE3A-224ENST00000635914 CSF3RQ99062 836 aa12.71□□□□□ -0.38
UBE3A-224ENST00000635914 QRSL1Q9H0R6 528 aaKnown RBP12.71□□□□□ -0.38
UBE3A-224ENST00000635914 TXNRD2Q9NNW7 524 aa12.71□□□□□ -0.38
UBE3A-224ENST00000635914 EIF4E2O60573 245 aaKnown RBP12.71□□□□□ -0.38
UBE3A-224ENST00000635914 OR5G3P0C626 314 aa12.71□□□□□ -0.38
UBE3A-224ENST00000635914 TBXA2RP21731 343 aa12.71□□□□□ -0.38
UBE3A-224ENST00000635914 RANBP10Q6VN20 620 aa12.71□□□□□ -0.38
UBE3A-224ENST00000635914 GPR26Q8NDV2 337 aa12.71□□□□□ -0.38
UBE3A-224ENST00000635914 PDLIM5Q96HC4 596 aaKnown RBP12.71□□□□□ -0.38
UBE3A-224ENST00000635914 C10orf90Q96M02 699 aa12.71□□□□□ -0.38
UBE3A-224ENST00000635914 ACSM4P0C7M7 580 aa12.71□□□□□ -0.38
UBE3A-224ENST00000635914 TMEM65Q6PI78 240 aa12.71□□□□□ -0.38
UBE3A-224ENST00000635914 WBP2Q969T9 261 aa12.71□□□□□ -0.38
UBE3A-224ENST00000635914 SARAFQ96BY9 339 aa12.71□□□□□ -0.38
UBE3A-224ENST00000635914 GALMQ96C23 342 aa12.71□□□□□ -0.38
UBE3A-224ENST00000635914 THOC3Q96J01 351 aaKnown RBP12.71□□□□□ -0.38
UBE3A-224ENST00000635914 UMAD1C9J7I0 102 aa12.7□□□□□ -0.38
UBE3A-224ENST00000635914 IRS1P35568 1242 aa12.7□□□□□ -0.38
UBE3A-224ENST00000635914 MLF2Q15773 248 aaPredicted RBP12.7□□□□□ -0.38
UBE3A-224ENST00000635914 SIAH1Q8IUQ4 282 aa12.7□□□□□ -0.38
UBE3A-224ENST00000635914 SLC38A5Q8WUX1 472 aa12.7□□□□□ -0.38
UBE3A-224ENST00000635914 LANCL2Q9NS86 450 aa12.7□□□□□ -0.38
UBE3A-224ENST00000635914 G3V2L1 256 aa12.7□□□□□ -0.38
UBE3A-224ENST00000635914 TNFRSF1AP19438 455 aa12.7□□□□□ -0.38
UBE3A-224ENST00000635914 ZDHHC5Q9C0B5 715 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms