RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 MED20Q9H944 212 aa13.39□□□□□ -0.27
CLN6-211ENST00000635754 PLEK2Q9NYT0 353 aa13.39□□□□□ -0.27
CLN6-211ENST00000635754 TVP23BQ9NYZ1 205 aa13.39□□□□□ -0.27
CLN6-211ENST00000635754 KCNG2Q9UJ96 466 aa13.39□□□□□ -0.27
CLN6-211ENST00000635754 ZAR1LA6NP61 321 aa13.39□□□□□ -0.27
CLN6-211ENST00000635754 TMCC2O75069 709 aa13.39□□□□□ -0.27
CLN6-211ENST00000635754 SOD3P08294 240 aa13.39□□□□□ -0.27
CLN6-211ENST00000635754 CLUP10909 449 aa13.39□□□□□ -0.27
CLN6-211ENST00000635754 CCNOP22674 350 aa13.39□□□□□ -0.27
CLN6-211ENST00000635754 GDI2P50395 445 aaKnown RBP13.39□□□□□ -0.27
CLN6-211ENST00000635754 ALDH3A2P51648 485 aa13.39□□□□□ -0.27
CLN6-211ENST00000635754 RPS23P62266 143 aaKnown RBP13.39□□□□□ -0.27
CLN6-211ENST00000635754 ADAM8P78325 824 aa13.39□□□□□ -0.27
CLN6-211ENST00000635754 SNAPC1Q16533 368 aa13.39□□□□□ -0.27
CLN6-211ENST00000635754 DEFB113Q30KQ7 82 aa13.39□□□□□ -0.27
CLN6-211ENST00000635754 PLBD1Q6P4A8 553 aa13.39□□□□□ -0.27
CLN6-211ENST00000635754 VHLLQ6RSH7 139 aa13.39□□□□□ -0.27
CLN6-211ENST00000635754 DTX2Q86UW9 622 aa13.39□□□□□ -0.27
CLN6-211ENST00000635754 CBR4Q8N4T8 237 aa13.39□□□□□ -0.27
CLN6-211ENST00000635754 GJC3Q8NFK1 279 aa13.39□□□□□ -0.27
CLN6-211ENST00000635754 OR2AJ1Q8NGZ0 328 aa13.39□□□□□ -0.27
CLN6-211ENST00000635754 GABARAPL3Q9BY60 117 aa13.39□□□□□ -0.27
CLN6-211ENST00000635754 RIBC2Q9H4K1 309 aa13.39□□□□□ -0.27
CLN6-211ENST00000635754 ZNF442Q9H7R0 627 aa13.39□□□□□ -0.27
CLN6-211ENST00000635754 BEX4Q9NWD9 120 aaPredicted RBP13.39□□□□□ -0.27
CLN6-211ENST00000635754 MRPL22Q9NWU5 206 aaKnown RBP13.39□□□□□ -0.27
CLN6-211ENST00000635754 USE1Q9NZ43 259 aa13.39□□□□□ -0.27
CLN6-211ENST00000635754 NDRG4Q9ULP0 352 aaKnown RBP13.39□□□□□ -0.27
CLN6-211ENST00000635754 LHFPL6Q9Y693 200 aa13.39□□□□□ -0.27
CLN6-211ENST00000635754 C5orf49A4QMS7 147 aa13.38□□□□□ -0.27
CLN6-211ENST00000635754 VSTM5A8MXK1 200 aa13.38□□□□□ -0.27
CLN6-211ENST00000635754 SMPD2O60906 423 aa13.38□□□□□ -0.27
CLN6-211ENST00000635754 COX5BP10606 129 aa13.38□□□□□ -0.27
CLN6-211ENST00000635754 EPHA2P29317 976 aa13.38□□□□□ -0.27
CLN6-211ENST00000635754 HTR5AP47898 357 aa13.38□□□□□ -0.27
CLN6-211ENST00000635754 RAD23AP54725 363 aa13.38□□□□□ -0.27
CLN6-211ENST00000635754 NKX6-1P78426 367 aaPredicted RBP13.38□□□□□ -0.27
CLN6-211ENST00000635754 RAB35Q15286 201 aa13.38□□□□□ -0.27
CLN6-211ENST00000635754 SLX4IPQ5VYV7 408 aa13.38□□□□□ -0.27
CLN6-211ENST00000635754 VASH1Q7L8A9 365 aaPredicted RBP13.38□□□□□ -0.27
CLN6-211ENST00000635754 CXXC5Q7LFL8 322 aaKnown RBP13.38□□□□□ -0.27
CLN6-211ENST00000635754 CPOQ8IVL8 374 aa13.38□□□□□ -0.27
CLN6-211ENST00000635754 PAQR4Q8N4S7 273 aaPredicted RBP13.38□□□□□ -0.27
CLN6-211ENST00000635754 ZNRF4Q8WWF5 429 aa13.38□□□□□ -0.27
CLN6-211ENST00000635754 IGFBPL1Q8WX77 278 aa13.38□□□□□ -0.27
CLN6-211ENST00000635754 PTP4A1Q93096 173 aa13.38□□□□□ -0.27
CLN6-211ENST00000635754 EME1Q96AY2 570 aa13.38□□□□□ -0.27
CLN6-211ENST00000635754 POM121L2Q96KW2 1035 aa13.38□□□□□ -0.27
CLN6-211ENST00000635754 TRAF4Q9BUZ4 470 aaPredicted RBP13.38□□□□□ -0.27
CLN6-211ENST00000635754 HCAR1Q9BXC0 346 aa13.38□□□□□ -0.27
CLN6-211ENST00000635754 OR51V1Q9H2C8 321 aa13.38□□□□□ -0.27
CLN6-211ENST00000635754 HINT3Q9NQE9 182 aaKnown RBP13.38□□□□□ -0.27
CLN6-211ENST00000635754 CBLN4Q9NTU7 201 aa13.38□□□□□ -0.27
CLN6-211ENST00000635754 ITGB1BP2Q9UKP3 347 aa13.38□□□□□ -0.27
CLN6-211ENST00000635754 COMMD3-BMI1R4GMX3 469 aa13.38□□□□□ -0.27
CLN6-211ENST00000635754 CSMD1Q96PZ7 3565 aa13.37□□□□□ -0.27
CLN6-211ENST00000635754 LOC100509620A0A075B734 347 aa13.37□□□□□ -0.27
CLN6-211ENST00000635754 TVP23AA6NH52 213 aa13.37□□□□□ -0.27
CLN6-211ENST00000635754 RER1O15258 196 aa13.37□□□□□ -0.27
CLN6-211ENST00000635754 PRODHO43272 600 aa13.37□□□□□ -0.27
CLN6-211ENST00000635754 GLCEO94923 617 aa13.37□□□□□ -0.27
CLN6-211ENST00000635754 PCSK6P29122 969 aa13.37□□□□□ -0.27
CLN6-211ENST00000635754 THBS4P35443 961 aa13.37□□□□□ -0.27
CLN6-211ENST00000635754 GGT2P36268 569 aa13.37□□□□□ -0.27
CLN6-211ENST00000635754 RCN1Q15293 331 aa13.37□□□□□ -0.27
CLN6-211ENST00000635754 ADIPOQQ15848 244 aa13.37□□□□□ -0.27
CLN6-211ENST00000635754 C12orf73Q69YU5 71 aa13.37□□□□□ -0.27
CLN6-211ENST00000635754 CORO6Q6QEF8 472 aa13.37□□□□□ -0.27
CLN6-211ENST00000635754 LYPD4Q6UWN0 246 aa13.37□□□□□ -0.27
CLN6-211ENST00000635754 ZBTB49Q6ZSB9 765 aa13.37□□□□□ -0.27
CLN6-211ENST00000635754 LINC00346Q8IVM7 164 aa13.37□□□□□ -0.27
CLN6-211ENST00000635754 GRIP2Q9C0E4 1043 aa13.37□□□□□ -0.27
CLN6-211ENST00000635754 HDHD2Q9H0R4 259 aa13.37□□□□□ -0.27
CLN6-211ENST00000635754 EIF3KQ9UBQ5 218 aaKnown RBP13.37□□□□□ -0.27
CLN6-211ENST00000635754 CYB5R1Q9UHQ9 305 aa13.37□□□□□ -0.27
CLN6-211ENST00000635754 ATPIF1Q9UII2 106 aa13.37□□□□□ -0.27
CLN6-211ENST00000635754 MYO9AB2RTY4 2548 aa13.36□□□□□ -0.27
CLN6-211ENST00000635754 SYNGR3O43761 229 aa13.36□□□□□ -0.27
CLN6-211ENST00000635754 OR4A8P0C604 315 aa13.36□□□□□ -0.27
CLN6-211ENST00000635754 FAM157BP0CG42 384 aa13.36□□□□□ -0.27
CLN6-211ENST00000635754 BMP4P12644 408 aa13.36□□□□□ -0.27
CLN6-211ENST00000635754 ANPEPP15144 967 aa13.36□□□□□ -0.27
CLN6-211ENST00000635754 GLRXP35754 106 aa13.36□□□□□ -0.27
CLN6-211ENST00000635754 SERPINF1P36955 418 aa13.36□□□□□ -0.27
CLN6-211ENST00000635754 RAD52P43351 418 aa13.36□□□□□ -0.27
CLN6-211ENST00000635754 ENTPD1P49961 510 aa13.36□□□□□ -0.27
CLN6-211ENST00000635754 ART1P52961 327 aa13.36□□□□□ -0.27
CLN6-211ENST00000635754 RPS7P62081 194 aaKnown RBP13.36□□□□□ -0.27
CLN6-211ENST00000635754 HIST1H3AP68431 136 aa13.36□□□□□ -0.27
CLN6-211ENST00000635754 KLHL12Q53G59 568 aa13.36□□□□□ -0.27
CLN6-211ENST00000635754 CCDC92Q53HC0 331 aaPredicted RBP13.36□□□□□ -0.27
CLN6-211ENST00000635754 ELFN2Q5R3F8 820 aa13.36□□□□□ -0.27
CLN6-211ENST00000635754 HIST2H3PS2Q5TEC6 136 aa13.36□□□□□ -0.27
CLN6-211ENST00000635754 LINC01590Q5TEZ4 76 aa13.36□□□□□ -0.27
CLN6-211ENST00000635754 SLC18B1Q6NT16 456 aa13.36□□□□□ -0.27
CLN6-211ENST00000635754 UNQ6126/PRO20091Q6UXV3 157 aa13.36□□□□□ -0.27
CLN6-211ENST00000635754 HIST2H3AQ71DI3 136 aa13.36□□□□□ -0.27
CLN6-211ENST00000635754 ZNF511Q8NB15 262 aa13.36□□□□□ -0.27
CLN6-211ENST00000635754 BCL2L14Q9BZR8 327 aa13.36□□□□□ -0.27
CLN6-211ENST00000635754 OR51B6Q9H340 312 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms