RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 WNT6Q9Y6F9 365 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 COL11A2P13942 1736 aaPredicted RBP3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 BAZ2AQ9UIF9 1905 aaKnown RBP3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 PSMB11A5LHX3 300 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 OR6C6A6NF89 314 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 SHISA7A6NL88 538 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 A8MWP6 167 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 PROB1E7EW31 1015 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 NPIPB9F8W1W9 429 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 AGPAT2O15120 278 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 EDIL3O43854 480 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 TOXO94900 526 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 VENTXO95231 258 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 GLP2RO95838 553 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 MPIG6BO95866 241 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 IFNW1P05000 195 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 SFTPBP07988 381 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 HIST1H2AGP0C0S8 130 aaPredicted RBP3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 GKN3PP0CG01 181 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 SLC35E2BP0CK96 405 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 SLC35E2P0CK97 266 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 ARSBP15848 533 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 HIST1H2ADP20671 130 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 CLDN20P56880 219 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 SLC37A1P57057 533 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 OR10A3P58181 314 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 RBM39Q14498 530 aaKnown RBP3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 CDO1Q16878 200 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 SNAI3Q3KNW1 292 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 SOHLH1Q5JUK2 328 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 CDCP2Q5VXM1 449 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 HIST2H2AA3Q6FI13 130 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 FAAP20Q6NZ36 180 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 SIGLEC15Q6ZMC9 328 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 MRPL52Q86TS9 123 aaKnown RBP3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 SLC30A8Q8IWU4 369 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 CMTM1Q8IZ96 169 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 TMEM156Q8N614 296 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 LRRC75AQ8NAA5 344 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 OR13C4Q8NGS5 318 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 CNIH3Q8TBE1 160 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 ORAOV1Q8WV07 137 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 RSPRY1Q96DX4 576 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 TCTN2Q96GX1 697 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 FAM46AQ96IP4 442 aaKnown RBP3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 HIST1H2AHQ96KK5 128 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 LYSMD1Q96S90 227 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 HIST1H2AJQ99878 128 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 LRRC3Q9BY71 257 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 OR11A1Q9GZK7 315 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 APMAPQ9HDC9 416 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 FAM206AQ9NX38 181 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 PLA2G3Q9NZ20 509 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 KCNMB2Q9Y691 235 aa3.54□□□□□ -1.84
R3HDM1-220ENST00000628915 OR11H12B2RN74 326 aa3.53□□□□□ -1.84
R3HDM1-220ENST00000628915 TMEM233B4DJY2 109 aa3.53□□□□□ -1.84
R3HDM1-220ENST00000628915 BLOC1S5-TXNDC5H3BN57 136 aa3.53□□□□□ -1.84
R3HDM1-220ENST00000628915 SEMA7AO75326 666 aa3.53□□□□□ -1.84
R3HDM1-220ENST00000628915 SLC16A8O95907 504 aa3.53□□□□□ -1.84
R3HDM1-220ENST00000628915 EFEMP2O95967 443 aa3.53□□□□□ -1.84
R3HDM1-220ENST00000628915 OR5G3P0C626 314 aa3.53□□□□□ -1.84
R3HDM1-220ENST00000628915 GJA4P35212 333 aa3.53□□□□□ -1.84
R3HDM1-220ENST00000628915 NPBWR2P48146 333 aa3.53□□□□□ -1.84
R3HDM1-220ENST00000628915 CLDN12P56749 244 aa3.53□□□□□ -1.84
R3HDM1-220ENST00000628915 RPL24P83731 157 aaKnown RBP3.53□□□□□ -1.84
R3HDM1-220ENST00000628915 IRF9Q00978 393 aa3.53□□□□□ -1.84
R3HDM1-220ENST00000628915 SLC25A11Q02978 314 aaKnown RBP3.53□□□□□ -1.84
R3HDM1-220ENST00000628915 CPZQ66K79 652 aa3.53□□□□□ -1.84
R3HDM1-220ENST00000628915 CAPN13Q6MZZ7 669 aaPredicted RBP3.53□□□□□ -1.84
R3HDM1-220ENST00000628915 ZNF774Q6NX45 483 aa3.53□□□□□ -1.84
R3HDM1-220ENST00000628915 FA2HQ7L5A8 372 aa3.53□□□□□ -1.84
R3HDM1-220ENST00000628915 CMC1Q7Z7K0 106 aa3.53□□□□□ -1.84
R3HDM1-220ENST00000628915 ATG4DQ86TL0 474 aaPredicted RBP3.53□□□□□ -1.84
R3HDM1-220ENST00000628915 CD163Q86VB7 1156 aa3.53□□□□□ -1.84
R3HDM1-220ENST00000628915 PHYKPLQ8IUZ5 450 aa3.53□□□□□ -1.84
R3HDM1-220ENST00000628915 SLC35G3Q8N808 338 aa3.53□□□□□ -1.84
R3HDM1-220ENST00000628915 ZNF548Q8NEK5 533 aaPredicted RBP3.53□□□□□ -1.84
R3HDM1-220ENST00000628915 OR11H1Q8NG94 326 aa3.53□□□□□ -1.84
R3HDM1-220ENST00000628915 OR1K1Q8NGR3 316 aa3.53□□□□□ -1.84
R3HDM1-220ENST00000628915 OR11H2Q8NH07 326 aa3.53□□□□□ -1.84
R3HDM1-220ENST00000628915 FCAMRQ8WWV6 532 aa3.53□□□□□ -1.84
R3HDM1-220ENST00000628915 ISOC2Q96AB3 205 aa3.53□□□□□ -1.84
R3HDM1-220ENST00000628915 TMEM125Q96AQ2 219 aa3.53□□□□□ -1.84
R3HDM1-220ENST00000628915 CPB2Q96IY4 423 aa3.53□□□□□ -1.84
R3HDM1-220ENST00000628915 GPR78Q96P69 363 aa3.53□□□□□ -1.84
R3HDM1-220ENST00000628915 GPER1Q99527 375 aa3.53□□□□□ -1.84
R3HDM1-220ENST00000628915 ANAPC13Q9BS18 74 aa3.53□□□□□ -1.84
R3HDM1-220ENST00000628915 GPR174Q9BXC1 333 aa3.53□□□□□ -1.84
R3HDM1-220ENST00000628915 SLC39A8Q9C0K1 460 aa3.53□□□□□ -1.84
R3HDM1-220ENST00000628915 PLAC1Q9HBJ0 212 aa3.53□□□□□ -1.84
R3HDM1-220ENST00000628915 A4GNTQ9UNA3 340 aa3.53□□□□□ -1.84
R3HDM1-220ENST00000628915 CELSR3Q9NYQ7 3312 aa3.53□□□□□ -1.84
R3HDM1-220ENST00000628915 TANC1Q9C0D5 1861 aa3.53□□□□□ -1.84
R3HDM1-220ENST00000628915 ZNF816-ZNF321PA0A0X1KG74 233 aa3.53□□□□□ -1.84
R3HDM1-220ENST00000628915 GLTPD2A6NH11 291 aa3.53□□□□□ -1.84
R3HDM1-220ENST00000628915 A8MVM7 634 aa3.53□□□□□ -1.84
R3HDM1-220ENST00000628915 A8MXK9 166 aa3.53□□□□□ -1.84
R3HDM1-220ENST00000628915 RNASEK-C17orf49H0YIS7 233 aa3.53□□□□□ -1.84
R3HDM1-220ENST00000628915 UPK1AO00322 258 aa3.53□□□□□ -1.84
R3HDM1-220ENST00000628915 SELENOFO60613 162 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms