RNA–Protein interactions for RNA: ENST00000628606.1

CHRNA4-211, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 183 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-211ENST00000628606 HTR5AP47898 357 aa13.62□□□□□ -0.23
CHRNA4-211ENST00000628606 TMEM33P57088 247 aa13.62□□□□□ -0.23
CHRNA4-211ENST00000628606 PPP1CBP62140 327 aa13.62□□□□□ -0.23
CHRNA4-211ENST00000628606 LSM6P62312 80 aaKnown RBP13.62□□□□□ -0.23
CHRNA4-211ENST00000628606 CCL8P80075 99 aa13.62□□□□□ -0.23
CHRNA4-211ENST00000628606 MRPS11P82912 194 aaKnown RBP13.62□□□□□ -0.23
CHRNA4-211ENST00000628606 TEKQ02763 1124 aa13.62□□□□□ -0.23
CHRNA4-211ENST00000628606 AQP6Q13520 282 aa13.62□□□□□ -0.23
CHRNA4-211ENST00000628606 RIN1Q13671 783 aa13.62□□□□□ -0.23
CHRNA4-211ENST00000628606 ELFN2Q5R3F8 820 aa13.62□□□□□ -0.23
CHRNA4-211ENST00000628606 SPATA46Q5T0L3 261 aa13.62□□□□□ -0.23
CHRNA4-211ENST00000628606 PGM2L1Q6PCE3 622 aa13.62□□□□□ -0.23
CHRNA4-211ENST00000628606 PRIMA1Q86XR5 153 aa13.62□□□□□ -0.23
CHRNA4-211ENST00000628606 ZNF101Q8IZC7 436 aa13.62□□□□□ -0.23
CHRNA4-211ENST00000628606 HPS1Q92902 700 aa13.62□□□□□ -0.23
CHRNA4-211ENST00000628606 LRGUKQ96M69 825 aa13.62□□□□□ -0.23
CHRNA4-211ENST00000628606 SNX18Q96RF0 628 aa13.62□□□□□ -0.23
CHRNA4-211ENST00000628606 GPA33Q99795 319 aa13.62□□□□□ -0.23
CHRNA4-211ENST00000628606 OR2J1Q9GZK6 312 aa13.62□□□□□ -0.23
CHRNA4-211ENST00000628606 NUAK2Q9H093 628 aa13.62□□□□□ -0.23
CHRNA4-211ENST00000628606 PLEK2Q9NYT0 353 aa13.62□□□□□ -0.23
CHRNA4-211ENST00000628606 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.61□□□□□ -0.23
CHRNA4-211ENST00000628606 LRP5LA4QPB2 252 aa13.61□□□□□ -0.23
CHRNA4-211ENST00000628606 H3BSA7 217 aa13.61□□□□□ -0.23
CHRNA4-211ENST00000628606 IDH3BO43837 385 aa13.61□□□□□ -0.23
CHRNA4-211ENST00000628606 SCG5P05408 212 aa13.61□□□□□ -0.23
CHRNA4-211ENST00000628606 TACSTD2P09758 323 aa13.61□□□□□ -0.23
CHRNA4-211ENST00000628606 GSTM3P21266 225 aa13.61□□□□□ -0.23
CHRNA4-211ENST00000628606 COL8A2P25067 703 aa13.61□□□□□ -0.23
CHRNA4-211ENST00000628606 WNT5AP41221 380 aa13.61□□□□□ -0.23
CHRNA4-211ENST00000628606 CDKN2AP42771 156 aaKnown RBP13.61□□□□□ -0.23
CHRNA4-211ENST00000628606 ZNF81P51508 661 aa13.61□□□□□ -0.23
CHRNA4-211ENST00000628606 FXYD6P3P58550 94 aa13.61□□□□□ -0.23
CHRNA4-211ENST00000628606 GLO1Q04760 184 aa13.61□□□□□ -0.23
CHRNA4-211ENST00000628606 TSPAN31Q12999 210 aa13.61□□□□□ -0.23
CHRNA4-211ENST00000628606 TRIM25Q14258 630 aaKnown RBP13.61□□□□□ -0.23
CHRNA4-211ENST00000628606 FAM98BQ52LJ0 330 aaKnown RBP13.61□□□□□ -0.23
CHRNA4-211ENST00000628606 MBNL2Q5VZF2 373 aaKnown RBP13.61□□□□□ -0.23
CHRNA4-211ENST00000628606 RPL13AP3Q6NVV1 102 aa13.61□□□□□ -0.23
CHRNA4-211ENST00000628606 C1orf94Q6P1W5 598 aa13.61□□□□□ -0.23
CHRNA4-211ENST00000628606 LEG1Q6P5S2 330 aa13.61□□□□□ -0.23
CHRNA4-211ENST00000628606 PTCHD4Q6ZW05 846 aa13.61□□□□□ -0.23
CHRNA4-211ENST00000628606 OR52L1Q8NGH7 329 aa13.61□□□□□ -0.23
CHRNA4-211ENST00000628606 SLC25A40Q8TBP6 338 aa13.61□□□□□ -0.23
CHRNA4-211ENST00000628606 KLF14Q8TD94 323 aaPredicted RBP13.61□□□□□ -0.23
CHRNA4-211ENST00000628606 MSI2Q96DH6 328 aaKnown RBP13.61□□□□□ -0.23
CHRNA4-211ENST00000628606 MARS2Q96GW9 593 aaKnown RBP13.61□□□□□ -0.23
CHRNA4-211ENST00000628606 SAMD8Q96LT4 415 aa13.61□□□□□ -0.23
CHRNA4-211ENST00000628606 CYSLTR2Q9NS75 346 aa13.61□□□□□ -0.23
CHRNA4-211ENST00000628606 NKIRAS2Q9NYR9 191 aa13.61□□□□□ -0.23
CHRNA4-211ENST00000628606 PRPF19Q9UMS4 504 aaKnown RBP13.61□□□□□ -0.23
CHRNA4-211ENST00000628606 GRIP1Q9Y3R0 1128 aa13.61□□□□□ -0.23
CHRNA4-211ENST00000628606 ARPC3O15145 178 aa13.6□□□□□ -0.23
CHRNA4-211ENST00000628606 PPIHO43447 177 aaKnown RBP13.6□□□□□ -0.23
CHRNA4-211ENST00000628606 LILRA1O75019 489 aa13.6□□□□□ -0.23
CHRNA4-211ENST00000628606 HNF1AP20823 631 aa13.6□□□□□ -0.23
CHRNA4-211ENST00000628606 ATP6V1B2P21281 511 aa13.6□□□□□ -0.23
CHRNA4-211ENST00000628606 TUBG1P23258 451 aa13.6□□□□□ -0.23
CHRNA4-211ENST00000628606 MAGEB1P43366 347 aa13.6□□□□□ -0.23
CHRNA4-211ENST00000628606 GSSP48637 474 aa13.6□□□□□ -0.23
CHRNA4-211ENST00000628606 ZMAT1Q5H9K5 638 aa13.6□□□□□ -0.23
CHRNA4-211ENST00000628606 RINLQ6ZS11 566 aa13.6□□□□□ -0.23
CHRNA4-211ENST00000628606 NPEPL1Q8NDH3 523 aa13.6□□□□□ -0.23
CHRNA4-211ENST00000628606 OR4K13Q8NH42 304 aa13.6□□□□□ -0.23
CHRNA4-211ENST00000628606 IPCEF1Q8WWN9 437 aaPredicted RBP13.6□□□□□ -0.23
CHRNA4-211ENST00000628606 COG8Q96MW5 612 aa13.6□□□□□ -0.23
CHRNA4-211ENST00000628606 MAGIXQ9H6Y5 334 aa13.6□□□□□ -0.23
CHRNA4-211ENST00000628606 SAP30LQ9HAJ7 183 aa13.6□□□□□ -0.23
CHRNA4-211ENST00000628606 SRA1Q9HD15 236 aaKnown RBP13.6□□□□□ -0.23
CHRNA4-211ENST00000628606 TUBG2Q9NRH3 451 aa13.6□□□□□ -0.23
CHRNA4-211ENST00000628606 ZNF275Q9NSD4 429 aaPredicted RBP13.6□□□□□ -0.23
CHRNA4-211ENST00000628606 ASH2LQ9UBL3 628 aa13.6□□□□□ -0.23
CHRNA4-211ENST00000628606 CGGBP1Q9UFW8 167 aaPredicted RBP13.6□□□□□ -0.23
CHRNA4-211ENST00000628606 LYVE1Q9Y5Y7 322 aa13.6□□□□□ -0.23
CHRNA4-211ENST00000628606 KIAA1324LA8MWY0 1029 aaPredicted RBP13.59□□□□□ -0.23
CHRNA4-211ENST00000628606 TIMM8AO60220 97 aaPredicted RBP13.59□□□□□ -0.23
CHRNA4-211ENST00000628606 ICMTO60725 284 aa13.59□□□□□ -0.23
CHRNA4-211ENST00000628606 CDC14BO60729 498 aa13.59□□□□□ -0.23
CHRNA4-211ENST00000628606 NCR1O76036 304 aa13.59□□□□□ -0.23
CHRNA4-211ENST00000628606 CCNB2O95067 398 aa13.59□□□□□ -0.23
CHRNA4-211ENST00000628606 MPZL1O95297 269 aa13.59□□□□□ -0.23
CHRNA4-211ENST00000628606 NGFP01138 241 aa13.59□□□□□ -0.23
CHRNA4-211ENST00000628606 HIST1H1CP16403 213 aaKnown RBP13.59□□□□□ -0.23
CHRNA4-211ENST00000628606 MPV17P39210 176 aa13.59□□□□□ -0.23
CHRNA4-211ENST00000628606 HMGA2P52926 109 aa13.59□□□□□ -0.23
CHRNA4-211ENST00000628606 TSTQ16762 297 aaKnown RBP13.59□□□□□ -0.23
CHRNA4-211ENST00000628606 SLC36A3Q495N2 470 aa13.59□□□□□ -0.23
CHRNA4-211ENST00000628606 LCN8Q6JVE9 175 aa13.59□□□□□ -0.23
CHRNA4-211ENST00000628606 PGBD2Q6P3X8 592 aa13.59□□□□□ -0.23
CHRNA4-211ENST00000628606 RFPL4BQ6ZWI9 263 aa13.59□□□□□ -0.23
CHRNA4-211ENST00000628606 VASH1Q7L8A9 365 aaPredicted RBP13.59□□□□□ -0.23
CHRNA4-211ENST00000628606 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.59□□□□□ -0.23
CHRNA4-211ENST00000628606 LINC01356Q8N9X3 169 aa13.59□□□□□ -0.23
CHRNA4-211ENST00000628606 GJC3Q8NFK1 279 aa13.59□□□□□ -0.23
CHRNA4-211ENST00000628606 NMNAT3Q96T66 252 aa13.59□□□□□ -0.23
CHRNA4-211ENST00000628606 CDADC1Q9BWV3 514 aa13.59□□□□□ -0.23
CHRNA4-211ENST00000628606 TRIM15Q9C019 465 aa13.59□□□□□ -0.23
CHRNA4-211ENST00000628606 EGLN1Q9GZT9 426 aa13.59□□□□□ -0.23
CHRNA4-211ENST00000628606 C1orf21Q9H246 121 aa13.59□□□□□ -0.23
CHRNA4-211ENST00000628606 TBCCD1Q9NVR7 557 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms