RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 TMED9Q9BVK6 235 aa8.4□□□□□ -1.07
PDLIM5-223ENST00000627587 SLIRPQ9GZT3 109 aaKnown RBP8.4□□□□□ -1.07
PDLIM5-223ENST00000627587 EXO5Q9H790 373 aa8.4□□□□□ -1.07
PDLIM5-223ENST00000627587 TXNL4BQ9NX01 149 aaKnown RBP8.4□□□□□ -1.07
PDLIM5-223ENST00000627587 KLHL9Q9P2J3 617 aa8.4□□□□□ -1.07
PDLIM5-223ENST00000627587 MRM2Q9UI43 246 aaKnown RBP8.4□□□□□ -1.07
PDLIM5-223ENST00000627587 IKZF2Q9UKS7 526 aa8.4□□□□□ -1.07
PDLIM5-223ENST00000627587 MED12LQ86YW9 2145 aa8.4□□□□□ -1.07
PDLIM5-223ENST00000627587 APCP25054 2843 aa8.39□□□□□ -1.07
PDLIM5-223ENST00000627587 TRGV5A0A0B4J1U4 118 aa8.39□□□□□ -1.07
PDLIM5-223ENST00000627587 SHISA3A0PJX4 238 aa8.39□□□□□ -1.07
PDLIM5-223ENST00000627587 TFECO14948 347 aaPredicted RBP8.39□□□□□ -1.07
PDLIM5-223ENST00000627587 OGG1O15527 345 aa8.39□□□□□ -1.07
PDLIM5-223ENST00000627587 SC5DO75845 299 aa8.39□□□□□ -1.07
PDLIM5-223ENST00000627587 SULT1C4O75897 302 aa8.39□□□□□ -1.07
PDLIM5-223ENST00000627587 HRGP04196 525 aa8.39□□□□□ -1.07
PDLIM5-223ENST00000627587 KRT8P05787 483 aa8.39□□□□□ -1.07
PDLIM5-223ENST00000627587 ZNF24P17028 368 aa8.39□□□□□ -1.07
PDLIM5-223ENST00000627587 CD53P19397 219 aa8.39□□□□□ -1.07
PDLIM5-223ENST00000627587 SSTR2P30874 369 aa8.39□□□□□ -1.07
PDLIM5-223ENST00000627587 PEX19P40855 299 aa8.39□□□□□ -1.07
PDLIM5-223ENST00000627587 CSNK1A1P48729 337 aa8.39□□□□□ -1.07
PDLIM5-223ENST00000627587 ZNF133P52736 654 aaPredicted RBP8.39□□□□□ -1.07
PDLIM5-223ENST00000627587 NANOS3P60323 173 aaKnown RBP8.39□□□□□ -1.07
PDLIM5-223ENST00000627587 SIRPAP78324 504 aa8.39□□□□□ -1.07
PDLIM5-223ENST00000627587 EGR3Q06889 387 aa8.39□□□□□ -1.07
PDLIM5-223ENST00000627587 CCDC58Q4VC31 144 aa8.39□□□□□ -1.07
PDLIM5-223ENST00000627587 SLC18B1Q6NT16 456 aa8.39□□□□□ -1.07
PDLIM5-223ENST00000627587 SLC25A47Q6Q0C1 308 aa8.39□□□□□ -1.07
PDLIM5-223ENST00000627587 ARL9Q6T311 187 aa8.39□□□□□ -1.07
PDLIM5-223ENST00000627587 FCRLAQ7L513 359 aa8.39□□□□□ -1.07
PDLIM5-223ENST00000627587 OR10H5Q8NGA6 315 aa8.39□□□□□ -1.07
PDLIM5-223ENST00000627587 OR6N1Q8NGY5 312 aa8.39□□□□□ -1.07
PDLIM5-223ENST00000627587 TBC1D15Q8TC07 691 aa8.39□□□□□ -1.07
PDLIM5-223ENST00000627587 ASB17Q8WXJ9 295 aa8.39□□□□□ -1.07
PDLIM5-223ENST00000627587 MCHR2Q969V1 340 aa8.39□□□□□ -1.07
PDLIM5-223ENST00000627587 CCDC120Q96HB5 630 aa8.39□□□□□ -1.07
PDLIM5-223ENST00000627587 LURAP1Q96LR2 239 aa8.39□□□□□ -1.07
PDLIM5-223ENST00000627587 TTYH2Q9BSA4 534 aa8.39□□□□□ -1.07
PDLIM5-223ENST00000627587 DEFB127Q9H1M4 99 aa8.39□□□□□ -1.07
PDLIM5-223ENST00000627587 PPIL3Q9H2H8 161 aaKnown RBP8.39□□□□□ -1.07
PDLIM5-223ENST00000627587 GLTPQ9NZD2 209 aa8.39□□□□□ -1.07
PDLIM5-223ENST00000627587 SPRR3Q9UBC9 169 aa8.39□□□□□ -1.07
PDLIM5-223ENST00000627587 FOXD3Q9UJU5 478 aaPredicted RBP8.39□□□□□ -1.07
PDLIM5-223ENST00000627587 GSTK1Q9Y2Q3 226 aa8.39□□□□□ -1.07
PDLIM5-223ENST00000627587 UGT2A1Q9Y4X1 527 aa8.39□□□□□ -1.07
PDLIM5-223ENST00000627587 FLVCR1Q9Y5Y0 555 aa8.39□□□□□ -1.07
PDLIM5-223ENST00000627587 MYO7BQ6PIF6 2116 aa8.39□□□□□ -1.07
PDLIM5-223ENST00000627587 SVILO95425 2214 aa8.39□□□□□ -1.07
PDLIM5-223ENST00000627587 TRDV1A0A1B0GX56 115 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 A0A1W2PPL8 197 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 METTL15A6NJ78 407 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 CYTIPO60759 359 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 TMCC2O75069 709 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 SYNGR4O95473 234 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 QDPRP09417 244 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 OR8G3PP0DMU2 310 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 GALP22466 123 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 GRNP28799 593 aaKnown RBP8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 LAP3P28838 519 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 FGF9P31371 208 aaPredicted RBP8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 PSMB10P40306 273 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 SELENOPP49908 381 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 RPS11P62280 158 aaKnown RBP eCLIP8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 SLC3A1Q07837 685 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 RASGEF1BQ0VAM2 473 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 MRPL28Q13084 256 aaKnown RBP8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 CDK5R1Q15078 307 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 TRAM1Q15629 374 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 C3AR1Q16581 482 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 RPL22L1Q6P5R6 122 aaKnown RBP8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 KCTD18Q6PI47 426 aaPredicted RBP8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 CHMP1BQ7LBR1 199 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 YIPF7Q8N8F6 280 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 ST7LQ8TDW4 575 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 ABHD3Q8WU67 409 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 HTRA1Q92743 480 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 TMEM54Q969K7 222 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 INTS12Q96CB8 462 aaKnown RBP8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 CDADC1Q9BWV3 514 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 MCTS1Q9ULC4 181 aaKnown RBP8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 RCE1Q9Y256 329 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 HSPB2A8KAH6 182 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 GABRPO00591 440 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 CLPXO76031 633 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 AQP8O94778 261 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 INHBBP09529 407 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 EDNRAP25101 427 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 RPS19P39019 145 aaKnown RBP8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 GUCA1AP43080 201 aaPredicted RBP8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 TGM4P49221 684 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 EIF2B1Q14232 305 aaKnown RBP8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 HSPB2Q16082 182 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 TEX30Q5JUR7 227 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 LIPNQ5VXI9 398 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 C22orf42Q6IC83 251 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 MS4A15Q8N5U1 240 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 OR13C5Q8NGS8 318 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 C11orf40Q8WZ69 217 aa8.38□□□□□ -1.07
PDLIM5-223ENST00000627587 ZNF775Q96BV0 537 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms