RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 NDRG4Q9ULP0 352 aaKnown RBP12.79□□□□□ -0.36
PNKP-221ENST00000627317 RNF115Q9Y4L5 304 aa12.79□□□□□ -0.36
PNKP-221ENST00000627317 COMMD3-BMI1R4GMX3 469 aa12.79□□□□□ -0.36
PNKP-221ENST00000627317 FLNAP21333 2647 aaKnown RBP12.78□□□□□ -0.36
PNKP-221ENST00000627317 LOC100130705A0A1B0GUX0 176 aa12.78□□□□□ -0.36
PNKP-221ENST00000627317 IQCMA0A1B0GVH7 501 aa12.78□□□□□ -0.36
PNKP-221ENST00000627317 DPRXA6NFQ7 191 aa12.78□□□□□ -0.36
PNKP-221ENST00000627317 DLGAP1O14490 977 aa12.78□□□□□ -0.36
PNKP-221ENST00000627317 PTHP01270 115 aa12.78□□□□□ -0.36
PNKP-221ENST00000627317 IGLV1-44P01699 117 aa12.78□□□□□ -0.36
PNKP-221ENST00000627317 CELA3BP08861 270 aa12.78□□□□□ -0.36
PNKP-221ENST00000627317 MMP7P09237 267 aaPredicted RBP12.78□□□□□ -0.36
PNKP-221ENST00000627317 CECR9P0C854 216 aa12.78□□□□□ -0.36
PNKP-221ENST00000627317 DNASE1P24855 282 aa12.78□□□□□ -0.36
PNKP-221ENST00000627317 CD40P25942 277 aa12.78□□□□□ -0.36
PNKP-221ENST00000627317 RAB39AQ14964 217 aa12.78□□□□□ -0.36
PNKP-221ENST00000627317 DEFB113Q30KQ7 82 aa12.78□□□□□ -0.36
PNKP-221ENST00000627317 PABPC1L2AQ5JQF8 200 aa12.78□□□□□ -0.36
PNKP-221ENST00000627317 SYT9Q86SS6 491 aa12.78□□□□□ -0.36
PNKP-221ENST00000627317 KRTAP1-3Q8IUG1 177 aa12.78□□□□□ -0.36
PNKP-221ENST00000627317 GID4Q8IVV7 300 aa12.78□□□□□ -0.36
PNKP-221ENST00000627317 PIAS4Q8N2W9 510 aaPredicted RBP12.78□□□□□ -0.36
PNKP-221ENST00000627317 DHRSXQ8N5I4 330 aa12.78□□□□□ -0.36
PNKP-221ENST00000627317 ZNF511Q8NB15 262 aa12.78□□□□□ -0.36
PNKP-221ENST00000627317 NRG4Q8WWG1 115 aa12.78□□□□□ -0.36
PNKP-221ENST00000627317 IGFBPL1Q8WX77 278 aa12.78□□□□□ -0.36
PNKP-221ENST00000627317 ZMYND19Q96E35 227 aaPredicted RBP12.78□□□□□ -0.36
PNKP-221ENST00000627317 CDADC1Q9BWV3 514 aa12.78□□□□□ -0.36
PNKP-221ENST00000627317 OR2H1Q9GZK4 316 aa12.78□□□□□ -0.36
PNKP-221ENST00000627317 C1orf198Q9H425 327 aa12.78□□□□□ -0.36
PNKP-221ENST00000627317 MRPL22Q9NWU5 206 aaKnown RBP12.78□□□□□ -0.36
PNKP-221ENST00000627317 TIMM10BQ9Y5J6 103 aa12.78□□□□□ -0.36
PNKP-221ENST00000627317 CADP27708 2225 aa12.77□□□□□ -0.36
PNKP-221ENST00000627317 E9PQ18 207 aa12.77□□□□□ -0.37
PNKP-221ENST00000627317 ABCD4O14678 606 aa12.77□□□□□ -0.37
PNKP-221ENST00000627317 SLC16A6O15403 523 aa12.77□□□□□ -0.37
PNKP-221ENST00000627317 DOK2O60496 412 aa12.77□□□□□ -0.37
PNKP-221ENST00000627317 CRYAAP02489 173 aa12.77□□□□□ -0.37
PNKP-221ENST00000627317 SERPINA5P05154 406 aa12.77□□□□□ -0.37
PNKP-221ENST00000627317 SPARCP09486 303 aa12.77□□□□□ -0.37
PNKP-221ENST00000627317 ZNF14P17017 642 aaPredicted RBP12.77□□□□□ -0.37
PNKP-221ENST00000627317 SLC2A5P22732 501 aa12.77□□□□□ -0.37
PNKP-221ENST00000627317 ENTPD1P49961 510 aa12.77□□□□□ -0.37
PNKP-221ENST00000627317 SPOCK1Q08629 439 aa12.77□□□□□ -0.37
PNKP-221ENST00000627317 KEAP1Q14145 624 aa12.77□□□□□ -0.37
PNKP-221ENST00000627317 LINC01590Q5TEZ4 76 aa12.77□□□□□ -0.37
PNKP-221ENST00000627317 NXNL2Q5VZ03 156 aa12.77□□□□□ -0.37
PNKP-221ENST00000627317 TTC23Q5W5X9 447 aa12.77□□□□□ -0.37
PNKP-221ENST00000627317 ADAM5Q6NVV9 412 aa12.77□□□□□ -0.37
PNKP-221ENST00000627317 BCDIN3DQ7Z5W3 292 aaKnown RBP12.77□□□□□ -0.37
PNKP-221ENST00000627317 MYPOPQ86VE0 399 aaPredicted RBP12.77□□□□□ -0.37
PNKP-221ENST00000627317 ERI1Q8IV48 349 aaKnown RBP12.77□□□□□ -0.37
PNKP-221ENST00000627317 LINC00346Q8IVM7 164 aa12.77□□□□□ -0.37
PNKP-221ENST00000627317 ALDH16A1Q8IZ83 802 aa12.77□□□□□ -0.37
PNKP-221ENST00000627317 OR6N2Q8NGY6 317 aa12.77□□□□□ -0.37
PNKP-221ENST00000627317 OR2AJ1Q8NGZ0 328 aa12.77□□□□□ -0.37
PNKP-221ENST00000627317 AKR7LQ8NHP1 331 aa12.77□□□□□ -0.37
PNKP-221ENST00000627317 TRUB1Q8WWH5 349 aaKnown RBP12.77□□□□□ -0.37
PNKP-221ENST00000627317 MS4A3Q96HJ5 214 aa12.77□□□□□ -0.37
PNKP-221ENST00000627317 INTS14Q96SY0 518 aa12.77□□□□□ -0.37
PNKP-221ENST00000627317 APOL4Q9BPW4 351 aa12.77□□□□□ -0.37
PNKP-221ENST00000627317 ADI1Q9BV57 179 aa12.77□□□□□ -0.37
PNKP-221ENST00000627317 WDR76Q9H967 626 aa12.77□□□□□ -0.37
PNKP-221ENST00000627317 DNAJC27Q9NZQ0 273 aa12.77□□□□□ -0.37
PNKP-221ENST00000627317 EDARQ9UNE0 448 aa12.77□□□□□ -0.37
PNKP-221ENST00000627317 LHFPL6Q9Y693 200 aa12.77□□□□□ -0.37
PNKP-221ENST00000627317 RAI1Q7Z5J4 1906 aaPredicted RBP12.77□□□□□ -0.37
PNKP-221ENST00000627317 CCDC182A6NF36 153 aa12.76□□□□□ -0.37
PNKP-221ENST00000627317 SLC22A31A6NKX4 558 aa12.76□□□□□ -0.37
PNKP-221ENST00000627317 SGCEO43556 437 aa12.76□□□□□ -0.37
PNKP-221ENST00000627317 MPZL2O60487 215 aa12.76□□□□□ -0.37
PNKP-221ENST00000627317 TMCC2O75069 709 aa12.76□□□□□ -0.37
PNKP-221ENST00000627317 APLNRP35414 380 aa12.76□□□□□ -0.37
PNKP-221ENST00000627317 HTR5AP47898 357 aa12.76□□□□□ -0.37
PNKP-221ENST00000627317 CDH11P55287 796 aa12.76□□□□□ -0.37
PNKP-221ENST00000627317 EFNB1P98172 346 aa12.76□□□□□ -0.37
PNKP-221ENST00000627317 PSG4Q00888 419 aa12.76□□□□□ -0.37
PNKP-221ENST00000627317 NAAAQ02083 359 aa12.76□□□□□ -0.37
PNKP-221ENST00000627317 AADACL4Q5VUY2 407 aa12.76□□□□□ -0.37
PNKP-221ENST00000627317 SLC18B1Q6NT16 456 aa12.76□□□□□ -0.37
PNKP-221ENST00000627317 ZNF774Q6NX45 483 aa12.76□□□□□ -0.37
PNKP-221ENST00000627317 CORO6Q6QEF8 472 aa12.76□□□□□ -0.37
PNKP-221ENST00000627317 SLC22A25Q6T423 547 aa12.76□□□□□ -0.37
PNKP-221ENST00000627317 ZNF704Q6ZNC4 412 aaPredicted RBP12.76□□□□□ -0.37
PNKP-221ENST00000627317 MEPCEQ7L2J0 689 aaKnown RBP12.76□□□□□ -0.37
PNKP-221ENST00000627317 SLC30A7Q8NEW0 376 aa12.76□□□□□ -0.37
PNKP-221ENST00000627317 GJC3Q8NFK1 279 aa12.76□□□□□ -0.37
PNKP-221ENST00000627317 IL17RDQ8NFM7 739 aa12.76□□□□□ -0.37
PNKP-221ENST00000627317 RFKQ969G6 155 aa12.76□□□□□ -0.37
PNKP-221ENST00000627317 RADILQ96JH8 1075 aa12.76□□□□□ -0.37
PNKP-221ENST00000627317 WNT5BQ9H1J7 359 aa12.76□□□□□ -0.37
PNKP-221ENST00000627317 CDH20Q9HBT6 801 aa12.76□□□□□ -0.37
PNKP-221ENST00000627317 PLEK2Q9NYT0 353 aa12.76□□□□□ -0.37
PNKP-221ENST00000627317 CYB5R1Q9UHQ9 305 aa12.76□□□□□ -0.37
PNKP-221ENST00000627317 GDF2Q9UK05 429 aaPredicted RBP12.76□□□□□ -0.37
PNKP-221ENST00000627317 POU2F3Q9UKI9 436 aa12.76□□□□□ -0.37
PNKP-221ENST00000627317 IGHV2OR16-5A0A0B4J2B6 119 aa12.75□□□□□ -0.37
PNKP-221ENST00000627317 RER1O15258 196 aa12.75□□□□□ -0.37
PNKP-221ENST00000627317 ROS1P08922 2347 aa12.75□□□□□ -0.37
PNKP-221ENST00000627317 APEX1P27695 318 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms