RNA–Protein interactions for RNA: ENST00000625778.2

UBE3A-209, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-209ENST00000625778 SLC17A9Q9BYT1 436 aa12.53□□□□□ -0.4
UBE3A-209ENST00000625778 CKLFQ9UBR5 152 aa12.53□□□□□ -0.4
UBE3A-209ENST00000625778 KIAA0100Q14667 2235 aaKnown RBP12.53□□□□□ -0.4
UBE3A-209ENST00000625778 TMEM212A6NML5 194 aa12.52□□□□□ -0.4
UBE3A-209ENST00000625778 PNPP00491 289 aa12.52□□□□□ -0.4
UBE3A-209ENST00000625778 NR2C1P13056 603 aa12.52□□□□□ -0.4
UBE3A-209ENST00000625778 HTR2CP28335 458 aa12.52□□□□□ -0.4
UBE3A-209ENST00000625778 PRPS1P60891 318 aa12.52□□□□□ -0.4
UBE3A-209ENST00000625778 ZNF542PQ5EBM4 170 aa12.52□□□□□ -0.4
UBE3A-209ENST00000625778 EXOSC6Q5RKV6 272 aaKnown RBP12.52□□□□□ -0.4
UBE3A-209ENST00000625778 PAPD4Q6PIY7 484 aaKnown RBP12.52□□□□□ -0.4
UBE3A-209ENST00000625778 STX12Q86Y82 276 aa12.52□□□□□ -0.4
UBE3A-209ENST00000625778 GPX8Q8TED1 209 aa12.52□□□□□ -0.4
UBE3A-209ENST00000625778 FOXRED1Q96CU9 486 aaPredicted RBP12.52□□□□□ -0.4
UBE3A-209ENST00000625778 VWCEQ96DN2 955 aa12.52□□□□□ -0.4
UBE3A-209ENST00000625778 HHIPL1Q96JK4 782 aa12.52□□□□□ -0.4
UBE3A-209ENST00000625778 C4orf45Q96LM5 186 aa12.52□□□□□ -0.4
UBE3A-209ENST00000625778 APOOQ9BUR5 198 aa12.52□□□□□ -0.4
UBE3A-209ENST00000625778 HDAC8Q9BY41 377 aa12.52□□□□□ -0.4
UBE3A-209ENST00000625778 FAM117AQ9C073 453 aa12.52□□□□□ -0.4
UBE3A-209ENST00000625778 KLK13Q9UKR3 277 aa12.52□□□□□ -0.4
UBE3A-209ENST00000625778 B9D1Q9UPM9 204 aa12.52□□□□□ -0.4
UBE3A-209ENST00000625778 TRBV5-5A0A0J9YX44 114 aa12.52□□□□□ -0.41
UBE3A-209ENST00000625778 SULT2B1O00204 365 aa12.52□□□□□ -0.41
UBE3A-209ENST00000625778 RENP00797 406 aa12.52□□□□□ -0.41
UBE3A-209ENST00000625778 FOSL2P15408 326 aa12.52□□□□□ -0.41
UBE3A-209ENST00000625778 GNALP38405 381 aa12.52□□□□□ -0.41
UBE3A-209ENST00000625778 RFC3P40938 356 aa12.52□□□□□ -0.41
UBE3A-209ENST00000625778 EIF1AXP47813 144 aaKnown RBP12.52□□□□□ -0.41
UBE3A-209ENST00000625778 FABP9Q0Z7S8 132 aa12.52□□□□□ -0.41
UBE3A-209ENST00000625778 SLC9A3R2Q15599 337 aa12.52□□□□□ -0.41
UBE3A-209ENST00000625778 INPP5JQ15735 1006 aaPredicted RBP12.52□□□□□ -0.41
UBE3A-209ENST00000625778 ZNF585AQ6P3V2 769 aa12.52□□□□□ -0.41
UBE3A-209ENST00000625778 RTN4RL2Q86UN3 420 aa12.52□□□□□ -0.41
UBE3A-209ENST00000625778 OR13C8Q8NGS7 320 aa12.52□□□□□ -0.41
UBE3A-209ENST00000625778 KTI12Q96EK9 354 aaPredicted RBP12.52□□□□□ -0.41
UBE3A-209ENST00000625778 LPAR4Q99677 370 aa12.52□□□□□ -0.41
UBE3A-209ENST00000625778 ZFYVE21Q9BQ24 234 aa12.52□□□□□ -0.41
UBE3A-209ENST00000625778 NMNAT2Q9BZQ4 307 aa12.52□□□□□ -0.41
UBE3A-209ENST00000625778 GSKIPQ9P0R6 139 aa12.52□□□□□ -0.41
UBE3A-209ENST00000625778 LMX1BO60663 402 aa12.52□□□□□ -0.41
UBE3A-209ENST00000625778 TXNDC12O95881 172 aa12.52□□□□□ -0.41
UBE3A-209ENST00000625778 AK1P00568 194 aa12.52□□□□□ -0.41
UBE3A-209ENST00000625778 IFNA6P05013 189 aa12.52□□□□□ -0.41
UBE3A-209ENST00000625778 ERCC1P07992 297 aaPredicted RBP12.52□□□□□ -0.41
UBE3A-209ENST00000625778 BTF3P20290 206 aaKnown RBP12.52□□□□□ -0.41
UBE3A-209ENST00000625778 OR2B8PP59922 312 aa12.52□□□□□ -0.41
UBE3A-209ENST00000625778 MGAT2Q10469 447 aa12.52□□□□□ -0.41
UBE3A-209ENST00000625778 PMPCAQ10713 525 aa12.52□□□□□ -0.41
UBE3A-209ENST00000625778 MESTQ5EB52 335 aa12.52□□□□□ -0.41
UBE3A-209ENST00000625778 ZNF684Q5T5D7 378 aa12.52□□□□□ -0.41
UBE3A-209ENST00000625778 C1QL3Q5VWW1 255 aa12.52□□□□□ -0.41
UBE3A-209ENST00000625778 TRAPPC6BQ86SZ2 158 aa12.52□□□□□ -0.41
UBE3A-209ENST00000625778 MRPL43Q8N983 215 aaKnown RBP12.52□□□□□ -0.41
UBE3A-209ENST00000625778 STOML3Q8TAV4 291 aa12.52□□□□□ -0.41
UBE3A-209ENST00000625778 EDARADDQ8WWZ3 215 aa12.52□□□□□ -0.41
UBE3A-209ENST00000625778 OR2M4Q96R27 311 aa12.52□□□□□ -0.41
UBE3A-209ENST00000625778 Q9N2J8 555 aa12.52□□□□□ -0.41
UBE3A-209ENST00000625778 EFCAB7A8K855 629 aa12.51□□□□□ -0.41
UBE3A-209ENST00000625778 SLC17A2O00624 439 aa12.51□□□□□ -0.41
UBE3A-209ENST00000625778 XKRYO14609 159 aa12.51□□□□□ -0.41
UBE3A-209ENST00000625778 ARPC3O15145 178 aa12.51□□□□□ -0.41
UBE3A-209ENST00000625778 NKX2-2O95096 273 aa12.51□□□□□ -0.41
UBE3A-209ENST00000625778 ABHD16AO95870 558 aa12.51□□□□□ -0.41
UBE3A-209ENST00000625778 PMP2P02689 132 aa12.51□□□□□ -0.41
UBE3A-209ENST00000625778 SERPINF1P36955 418 aa12.51□□□□□ -0.41
UBE3A-209ENST00000625778 MFGE8Q08431 387 aaPredicted RBP12.51□□□□□ -0.41
UBE3A-209ENST00000625778 FAM78AQ5JUQ0 283 aa12.51□□□□□ -0.41
UBE3A-209ENST00000625778 KRBOX4Q5JUW0 171 aa12.51□□□□□ -0.41
UBE3A-209ENST00000625778 NCMAPQ5T1S8 102 aa12.51□□□□□ -0.41
UBE3A-209ENST00000625778 KDM8Q8N371 416 aa12.51□□□□□ -0.41
UBE3A-209ENST00000625778 BHLHE23Q8NDY6 225 aa12.51□□□□□ -0.41
UBE3A-209ENST00000625778 OR4K17Q8NGC6 315 aa12.51□□□□□ -0.41
UBE3A-209ENST00000625778 OR1E3Q8WZA6 343 aa12.51□□□□□ -0.41
UBE3A-209ENST00000625778 DCBLD2Q96PD2 775 aa12.51□□□□□ -0.41
UBE3A-209ENST00000625778 PHB2Q99623 299 aa12.51□□□□□ -0.41
UBE3A-209ENST00000625778 SLC25A21Q9BQT8 299 aaPredicted RBP12.51□□□□□ -0.41
UBE3A-209ENST00000625778 MRPS18BQ9Y676 258 aaKnown RBP12.51□□□□□ -0.41
UBE3A-209ENST00000625778 PRSS38A1L453 326 aa12.51□□□□□ -0.41
UBE3A-209ENST00000625778 SERINC4A6NH21 518 aa12.51□□□□□ -0.41
UBE3A-209ENST00000625778 SLC16A7O60669 478 aa12.51□□□□□ -0.41
UBE3A-209ENST00000625778 KAT7O95251 611 aa12.51□□□□□ -0.41
UBE3A-209ENST00000625778 HOXB1P14653 301 aaPredicted RBP12.51□□□□□ -0.41
UBE3A-209ENST00000625778 NME2P22392 152 aa12.51□□□□□ -0.41
UBE3A-209ENST00000625778 PNLIPRP2P54317 469 aa12.51□□□□□ -0.41
UBE3A-209ENST00000625778 S100A10P60903 97 aa12.51□□□□□ -0.41
UBE3A-209ENST00000625778 BTG2P78543 158 aa12.51□□□□□ -0.41
UBE3A-209ENST00000625778 ZNF528Q3MIS6 628 aa12.51□□□□□ -0.41
UBE3A-209ENST00000625778 NPSR1Q6W5P4 371 aa12.51□□□□□ -0.41
UBE3A-209ENST00000625778 SLC29A4Q7RTT9 530 aa12.51□□□□□ -0.41
UBE3A-209ENST00000625778 WDSUB1Q8N9V3 476 aa12.51□□□□□ -0.41
UBE3A-209ENST00000625778 RBM14Q96PK6 669 aaKnown RBP12.51□□□□□ -0.41
UBE3A-209ENST00000625778 TSPAN32Q96QS1 320 aa12.51□□□□□ -0.41
UBE3A-209ENST00000625778 SUCNR1Q9BXA5 334 aa12.51□□□□□ -0.41
UBE3A-209ENST00000625778 SEMA6CQ9H3T2 930 aa12.51□□□□□ -0.41
UBE3A-209ENST00000625778 PILRAQ9UKJ1 303 aa12.51□□□□□ -0.41
UBE3A-209ENST00000625778 ARHGEF17Q96PE2 2063 aaPredicted RBP12.51□□□□□ -0.41
UBE3A-209ENST00000625778 IGKV1D-42A0A075B6H8 117 aa12.5□□□□□ -0.41
UBE3A-209ENST00000625778 CYR61O00622 381 aa12.5□□□□□ -0.41
UBE3A-209ENST00000625778 FBXO24O75426 580 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms