RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 SNAP29O95721 258 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 MT-ND5P03915 603 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 CST2P09228 141 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 CCL2P13500 99 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 DAOP14920 347 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 ZNF32P17041 273 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 MSR1P21757 451 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 USF1P22415 310 aaPredicted RBP5.5□□□□□ -1.53
TCF4-249ENST00000625716 STOMP27105 288 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 APEX1P27695 318 aaKnown RBP5.5□□□□□ -1.53
TCF4-249ENST00000625716 LAP3P28838 519 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 GCH1P30793 250 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 SDHAP31040 664 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 RRM2P31350 389 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 SLC6A6P31641 620 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 OMPP47874 163 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 CENPAP49450 140 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 ZNF133P52736 654 aaPredicted RBP5.5□□□□□ -1.53
TCF4-249ENST00000625716 UCP2P55851 309 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 LCN6P62502 163 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 MVKQ03426 396 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 GGTLC2Q14390 218 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 MTX3Q5HYI7 312 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 PABPC1L2AQ5JQF8 200 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 FAM27BQ5VT28 67 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 TMEM154Q6P9G4 183 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 DNM1P34Q6PK57 102 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 SMARCD3Q6STE5 483 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 ARL9Q6T311 187 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 CYP2R1Q6VVX0 501 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 DPY19L2P2Q6ZN68 376 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 DNM1P46Q6ZS02 220 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 TSEN54Q7Z6J9 526 aaKnown RBP5.5□□□□□ -1.53
TCF4-249ENST00000625716 ADCK1Q86TW2 530 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 JAZF1Q86VZ6 243 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 DHFR2Q86XF0 187 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 ZDHHC21Q8IVQ6 265 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 LINC00471Q8N535 108 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 FAM86B1Q8N7N1 296 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 CLDN22Q8N7P3 220 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 LRRC75AQ8NAA5 344 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 FGFBP3Q8TAT2 258 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 ZNF519Q8TB69 540 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 SYNPRQ8TBG9 265 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 FANK1Q8TC84 345 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 C10orf105Q8TEF2 133 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 SNX33Q8WV41 574 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 LRGUKQ96M69 825 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 Q96M85 177 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 ZNF75AQ96N20 296 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 DOK1Q99704 481 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 WACQ9BTA9 647 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 IFT27Q9BW83 186 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 MRPL37Q9BZE1 423 aaKnown RBP5.5□□□□□ -1.53
TCF4-249ENST00000625716 OR51B6Q9H340 312 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 MUC13Q9H3R2 512 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 SLCO1C1Q9NYB5 712 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 ACTR3BQ9P1U1 418 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 IL20RAQ9UHF4 553 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 ADAM21Q9UKJ8 722 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 FZR1Q9UM11 496 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 ADAM18Q9Y3Q7 739 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 UGT2A1Q9Y4X1 527 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 IER3IP1Q9Y5U9 82 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 HIVEP1P15822 2718 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 ITPR3Q14573 2671 aa5.5□□□□□ -1.53
TCF4-249ENST00000625716 IGKV1D-43A0A0B4J1Z2 117 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 TMEM129A0AVI4 362 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 PRSS37A4D1T9 235 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 C5orf49A4QMS7 147 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 INAFM1C9JVW0 142 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 TNFRSF11BO00300 401 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 SOCS2O14508 198 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 TPD52L2O43399 206 aaKnown RBP5.49□□□□□ -1.53
TCF4-249ENST00000625716 SLC16A7O60669 478 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 KHDRBS3O75525 346 aaKnown RBP5.49□□□□□ -1.53
TCF4-249ENST00000625716 RENP00797 406 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 MMP7P09237 267 aaPredicted RBP5.49□□□□□ -1.53
TCF4-249ENST00000625716 CRABP1P29762 137 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 ALDH3B1P43353 468 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 NR4A2P43354 598 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 LIMS1P48059 325 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 ARHGDIAP52565 204 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 KLF3P57682 345 aaPredicted RBP5.49□□□□□ -1.53
TCF4-249ENST00000625716 PSG4Q00888 419 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 LOXL1Q08397 574 aaPredicted RBP5.49□□□□□ -1.53
TCF4-249ENST00000625716 SCRN3Q0VDG4 424 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 KRR1Q13601 381 aaKnown RBP5.49□□□□□ -1.53
TCF4-249ENST00000625716 FHL1Q13642 323 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 TRIM25Q14258 630 aaKnown RBP5.49□□□□□ -1.53
TCF4-249ENST00000625716 SEC23BQ15437 767 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 FXNQ16595 210 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 RFX4Q33E94 735 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 ZNF718Q3SXZ3 478 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 FAM98BQ52LJ0 330 aaKnown RBP5.49□□□□□ -1.53
TCF4-249ENST00000625716 MESTQ5EB52 335 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 CYB5R2Q6BCY4 276 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 RINLQ6ZS11 566 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 ZNF584Q8IVC4 421 aa5.49□□□□□ -1.53
TCF4-249ENST00000625716 GLB1L2Q8IW92 636 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms