RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 B3GAT1Q9P2W7 334 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 ATXN7L1Q9ULK2 861 aaPredicted RBP8.43□□□□□ -1.06
PDPN-212ENST00000621990 EMC9Q9Y3B6 208 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 CACNA1CQ13936 2221 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 CABIN1Q9Y6J0 2220 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 KIF26BQ2KJY2 2108 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 IGKV1D-43A0A0B4J1Z2 117 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 TRBV11-1A0A0K0K1C0 115 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 A0A1W2PQM1 296 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 C2orf72A6NCS6 295 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 EFNA2O43921 213 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 RAD1O60671 282 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 SCRG1O75711 98 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 DKK1O94907 266 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 MPC2O95563 127 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 UBCP0CG48 685 aaKnown RBP8.43□□□□□ -1.06
PDPN-212ENST00000621990 ZNF823P16415 610 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 EPHA8P29322 1005 aaPredicted RBP8.43□□□□□ -1.06
PDPN-212ENST00000621990 PRSS3P35030 304 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 CXCL12P48061 93 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 RAP2BP61225 183 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 TLE3Q04726 772 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 PLPPR5Q32ZL2 321 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 C1orf100Q5SVJ3 147 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 PAPD4Q6PIY7 484 aaKnown RBP8.43□□□□□ -1.06
PDPN-212ENST00000621990 TMEM205Q6UW68 189 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 ZNF704Q6ZNC4 412 aaPredicted RBP8.43□□□□□ -1.06
PDPN-212ENST00000621990 CDH26Q8IXH8 852 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 NKAIN3Q8N8D7 197 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 OR5L2Q8NGL0 311 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 ANGPTL6Q8NI99 470 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 PIGKQ92643 395 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 MRPL13Q9BYD1 178 aaKnown RBP8.43□□□□□ -1.06
PDPN-212ENST00000621990 KCNK15Q9H427 330 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 SCPEP1Q9HB40 452 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 MGAT4CQ9UBM8 478 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 ZNF107Q9UII5 783 aaPredicted RBP8.43□□□□□ -1.06
PDPN-212ENST00000621990 OR52A1Q9UKL2 312 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 WDFY3Q8IZQ1 3526 aa8.43□□□□□ -1.06
PDPN-212ENST00000621990 TRAV18A0A075B6X5 111 aa8.42□□□□□ -1.06
PDPN-212ENST00000621990 LOC107986453A0A1B0GWG9 222 aa8.42□□□□□ -1.06
PDPN-212ENST00000621990 PLSCR5A0PG75 271 aa8.42□□□□□ -1.06
PDPN-212ENST00000621990 NOS1APO75052 506 aaPredicted RBP8.42□□□□□ -1.06
PDPN-212ENST00000621990 AKAIN1P0CW23 69 aa8.42□□□□□ -1.06
PDPN-212ENST00000621990 VSIG10L2P0DP72 767 aa8.42□□□□□ -1.06
PDPN-212ENST00000621990 ACTBP60709 375 aa8.42□□□□□ -1.06
PDPN-212ENST00000621990 GPR85P60893 370 aa8.42□□□□□ -1.06
PDPN-212ENST00000621990 ACTG1P63261 375 aa8.42□□□□□ -1.06
PDPN-212ENST00000621990 POU3F1Q03052 451 aaPredicted RBP8.42□□□□□ -1.06
PDPN-212ENST00000621990 NR0B2Q15466 257 aa8.42□□□□□ -1.06
PDPN-212ENST00000621990 ESCO2Q56NI9 601 aa8.42□□□□□ -1.06
PDPN-212ENST00000621990 GLYATL3Q5SZD4 288 aa8.42□□□□□ -1.06
PDPN-212ENST00000621990 GUSBP11Q6P575 273 aa8.42□□□□□ -1.06
PDPN-212ENST00000621990 FAM198BQ6UWH4 519 aa8.42□□□□□ -1.06
PDPN-212ENST00000621990 ADGRE4PQ86SQ3 457 aa8.42□□□□□ -1.06
PDPN-212ENST00000621990 OR4D10Q8NGI6 311 aa8.42□□□□□ -1.06
PDPN-212ENST00000621990 MARVELD3Q96A59 401 aa8.42□□□□□ -1.06
PDPN-212ENST00000621990 SLC25A44Q96H78 314 aaPredicted RBP8.42□□□□□ -1.06
PDPN-212ENST00000621990 SPSB2Q99619 263 aa8.42□□□□□ -1.06
PDPN-212ENST00000621990 FAM206AQ9NX38 181 aa8.42□□□□□ -1.06
PDPN-212ENST00000621990 ZNF69Q9UC07 566 aa8.42□□□□□ -1.06
PDPN-212ENST00000621990 CYB5R1Q9UHQ9 305 aa8.42□□□□□ -1.06
PDPN-212ENST00000621990 GTF2A1LQ9UNN4 478 aa8.42□□□□□ -1.06
PDPN-212ENST00000621990 MRPS18BQ9Y676 258 aaKnown RBP8.42□□□□□ -1.06
PDPN-212ENST00000621990 IGHV5-10-1A0A0J9YXX1 117 aa8.42□□□□□ -1.06
PDPN-212ENST00000621990 LEUTXA8MZ59 168 aa8.42□□□□□ -1.06
PDPN-212ENST00000621990 TSC22D2O75157 780 aa8.42□□□□□ -1.06
PDPN-212ENST00000621990 LPLP06858 475 aa8.42□□□□□ -1.06
PDPN-212ENST00000621990 FBXO45P0C2W1 286 aa8.42□□□□□ -1.06
PDPN-212ENST00000621990 ZNF81P51508 661 aa8.42□□□□□ -1.06
PDPN-212ENST00000621990 P2RY4P51582 365 aa8.42□□□□□ -1.06
PDPN-212ENST00000621990 CAPZA1P52907 286 aa8.42□□□□□ -1.06
PDPN-212ENST00000621990 GUCA2AQ02747 115 aa8.42□□□□□ -1.06
PDPN-212ENST00000621990 SNTA1Q13424 505 aa8.42□□□□□ -1.06
PDPN-212ENST00000621990 CLPPQ16740 277 aaPredicted RBP8.42□□□□□ -1.06
PDPN-212ENST00000621990 TMEM244Q5VVB8 128 aa8.42□□□□□ -1.06
PDPN-212ENST00000621990 CPEB2Q7Z5Q1 589 aaKnown RBP8.42□□□□□ -1.06
PDPN-212ENST00000621990 MEIOBQ8N635 442 aa8.42□□□□□ -1.06
PDPN-212ENST00000621990 OR13C3Q8NGS6 347 aa8.42□□□□□ -1.06
PDPN-212ENST00000621990 POC1BQ8TC44 478 aa8.42□□□□□ -1.06
PDPN-212ENST00000621990 THAP3Q8WTV1 239 aaPredicted RBP8.42□□□□□ -1.06
PDPN-212ENST00000621990 SEH1LQ96EE3 360 aa8.42□□□□□ -1.06
PDPN-212ENST00000621990 ALX4Q9H161 411 aaPredicted RBP8.42□□□□□ -1.06
PDPN-212ENST00000621990 ATG5Q9H1Y0 275 aa8.42□□□□□ -1.06
PDPN-212ENST00000621990 SLCO5A1Q9H2Y9 848 aa8.42□□□□□ -1.06
PDPN-212ENST00000621990 C1orf198Q9H425 327 aa8.42□□□□□ -1.06
PDPN-212ENST00000621990 SERINC1Q9NRX5 453 aa8.42□□□□□ -1.06
PDPN-212ENST00000621990 MED29Q9NX70 200 aa8.42□□□□□ -1.06
PDPN-212ENST00000621990 MYOTQ9UBF9 498 aa8.42□□□□□ -1.06
PDPN-212ENST00000621990 EIF3KQ9UBQ5 218 aaKnown RBP8.42□□□□□ -1.06
PDPN-212ENST00000621990 VDAC3Q9Y277 283 aa8.42□□□□□ -1.06
PDPN-212ENST00000621990 RPH3AQ9Y2J0 694 aaPredicted RBP8.42□□□□□ -1.06
PDPN-212ENST00000621990 CFAP54Q96N23 3096 aa8.41□□□□□ -1.06
PDPN-212ENST00000621990 TMEM269A0A1B0GVZ9 245 aa8.41□□□□□ -1.06
PDPN-212ENST00000621990 RPS10-NUDT3A0A1W2PQS6 291 aa8.41□□□□□ -1.06
PDPN-212ENST00000621990 RAB6AP20340 208 aa8.41□□□□□ -1.06
PDPN-212ENST00000621990 ZNF41P51814 821 aaPredicted RBP8.41□□□□□ -1.06
PDPN-212ENST00000621990 EMP2P54851 167 aa8.41□□□□□ -1.06
PDPN-212ENST00000621990 P2RX3P56373 397 aa8.41□□□□□ -1.06
PDPN-212ENST00000621990 ZNF239Q16600 458 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms