RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 M0R129 80 aa16.08■□□□□ 0.16
CIRBP-245ENST00000621399 RER1O15258 196 aa16.08■□□□□ 0.16
CIRBP-245ENST00000621399 GLCEO94923 617 aa16.08■□□□□ 0.16
CIRBP-245ENST00000621399 CCNOP22674 350 aa16.08■□□□□ 0.16
CIRBP-245ENST00000621399 GSTT1P30711 240 aa16.08■□□□□ 0.16
CIRBP-245ENST00000621399 GGT2P36268 569 aa16.08■□□□□ 0.16
CIRBP-245ENST00000621399 GDI2P50395 445 aaKnown RBP16.08■□□□□ 0.16
CIRBP-245ENST00000621399 RPS7P62081 194 aaKnown RBP16.08■□□□□ 0.16
CIRBP-245ENST00000621399 HGFACQ04756 655 aa16.08■□□□□ 0.16
CIRBP-245ENST00000621399 KEAP1Q14145 624 aa16.08■□□□□ 0.16
CIRBP-245ENST00000621399 LINC01590Q5TEZ4 76 aa16.08■□□□□ 0.16
CIRBP-245ENST00000621399 CORO6Q6QEF8 472 aa16.08■□□□□ 0.16
CIRBP-245ENST00000621399 PAMR1Q6UXH9 720 aa16.08■□□□□ 0.16
CIRBP-245ENST00000621399 LINC00346Q8IVM7 164 aa16.08■□□□□ 0.16
CIRBP-245ENST00000621399 GALNT4Q8N4A0 578 aa16.08■□□□□ 0.16
CIRBP-245ENST00000621399 BBS1Q8NFJ9 593 aa16.08■□□□□ 0.16
CIRBP-245ENST00000621399 SMAP2Q8WU79 429 aaPredicted RBP16.08■□□□□ 0.16
CIRBP-245ENST00000621399 IL4I1Q96RQ9 567 aa16.08■□□□□ 0.16
CIRBP-245ENST00000621399 MBOAT4Q96T53 435 aa16.08■□□□□ 0.16
CIRBP-245ENST00000621399 DHRS9Q9BPW9 319 aa16.08■□□□□ 0.16
CIRBP-245ENST00000621399 WDR76Q9H967 626 aa16.08■□□□□ 0.16
CIRBP-245ENST00000621399 PLEK2Q9NYT0 353 aa16.08■□□□□ 0.16
CIRBP-245ENST00000621399 CYB5R1Q9UHQ9 305 aa16.08■□□□□ 0.16
CIRBP-245ENST00000621399 ST6GALNAC2Q9UJ37 374 aa16.08■□□□□ 0.16
CIRBP-245ENST00000621399 SPEF1Q9Y4P9 236 aa16.08■□□□□ 0.16
CIRBP-245ENST00000621399 C5orf49A4QMS7 147 aa16.07■□□□□ 0.16
CIRBP-245ENST00000621399 PRODHO43272 600 aa16.07■□□□□ 0.16
CIRBP-245ENST00000621399 DOK2O60496 412 aa16.07■□□□□ 0.16
CIRBP-245ENST00000621399 TMCC2O75069 709 aa16.07■□□□□ 0.16
CIRBP-245ENST00000621399 SNAP29O95721 258 aa16.07■□□□□ 0.16
CIRBP-245ENST00000621399 RAF1P04049 648 aa16.07■□□□□ 0.16
CIRBP-245ENST00000621399 NR4A1P22736 598 aa16.07■□□□□ 0.16
CIRBP-245ENST00000621399 FABP6P51161 128 aa16.07■□□□□ 0.16
CIRBP-245ENST00000621399 CDC42P60953 191 aa16.07■□□□□ 0.16
CIRBP-245ENST00000621399 EFNB1P98172 346 aa16.07■□□□□ 0.16
CIRBP-245ENST00000621399 CCDC92Q53HC0 331 aaPredicted RBP16.07■□□□□ 0.16
CIRBP-245ENST00000621399 SLC35D3Q5M8T2 416 aa16.07■□□□□ 0.16
CIRBP-245ENST00000621399 KRT80Q6KB66 452 aa16.07■□□□□ 0.16
CIRBP-245ENST00000621399 SLC18B1Q6NT16 456 aa16.07■□□□□ 0.16
CIRBP-245ENST00000621399 VHLLQ6RSH7 139 aa16.07■□□□□ 0.16
CIRBP-245ENST00000621399 VASH1Q7L8A9 365 aaPredicted RBP16.07■□□□□ 0.16
CIRBP-245ENST00000621399 CDH24Q86UP0 819 aa16.07■□□□□ 0.16
CIRBP-245ENST00000621399 PAQR4Q8N4S7 273 aaPredicted RBP16.07■□□□□ 0.16
CIRBP-245ENST00000621399 NUP37Q8NFH4 326 aa16.07■□□□□ 0.16
CIRBP-245ENST00000621399 TMEM163Q8TC26 289 aa16.07■□□□□ 0.16
CIRBP-245ENST00000621399 ZMYND19Q96E35 227 aaPredicted RBP16.07■□□□□ 0.16
CIRBP-245ENST00000621399 POM121L2Q96KW2 1035 aa16.07■□□□□ 0.16
CIRBP-245ENST00000621399 CA10Q9NS85 328 aa16.07■□□□□ 0.16
CIRBP-245ENST00000621399 FAIMQ9NVQ4 179 aa16.07■□□□□ 0.16
CIRBP-245ENST00000621399 H2AFY2Q9P0M6 372 aaPredicted RBP16.07■□□□□ 0.16
CIRBP-245ENST00000621399 NDRG4Q9ULP0 352 aaKnown RBP16.07■□□□□ 0.16
CIRBP-245ENST00000621399 PLEKHA6Q9Y2H5 1048 aa16.07■□□□□ 0.16
CIRBP-245ENST00000621399 COMMD3-BMI1R4GMX3 469 aa16.07■□□□□ 0.16
CIRBP-245ENST00000621399 CADP27708 2225 aa16.07■□□□□ 0.16
CIRBP-245ENST00000621399 SPG11Q96JI7 2443 aa16.06■□□□□ 0.16
CIRBP-245ENST00000621399 LOC100509620A0A075B734 347 aa16.06■□□□□ 0.16
CIRBP-245ENST00000621399 ZNF593O00488 134 aaPredicted RBP16.06■□□□□ 0.16
CIRBP-245ENST00000621399 SPARCP09486 303 aa16.06■□□□□ 0.16
CIRBP-245ENST00000621399 COX5BP10606 129 aa16.06■□□□□ 0.16
CIRBP-245ENST00000621399 DNASE1P24855 282 aa16.06■□□□□ 0.16
CIRBP-245ENST00000621399 PEX2P28328 305 aa16.06■□□□□ 0.16
CIRBP-245ENST00000621399 RPS27P42677 84 aaKnown RBP16.06■□□□□ 0.16
CIRBP-245ENST00000621399 HTR5AP47898 357 aa16.06■□□□□ 0.16
CIRBP-245ENST00000621399 ENTPD1P49961 510 aa16.06■□□□□ 0.16
CIRBP-245ENST00000621399 HIST1H3AP68431 136 aa16.06■□□□□ 0.16
CIRBP-245ENST00000621399 SLC34A1Q06495 639 aa16.06■□□□□ 0.16
CIRBP-245ENST00000621399 SNTB2Q13425 540 aaKnown RBP16.06■□□□□ 0.16
CIRBP-245ENST00000621399 APOFQ13790 326 aa16.06■□□□□ 0.16
CIRBP-245ENST00000621399 RAB35Q15286 201 aa16.06■□□□□ 0.16
CIRBP-245ENST00000621399 HIST2H3PS2Q5TEC6 136 aa16.06■□□□□ 0.16
CIRBP-245ENST00000621399 TMEM154Q6P9G4 183 aa16.06■□□□□ 0.16
CIRBP-245ENST00000621399 HIST2H3AQ71DI3 136 aa16.06■□□□□ 0.16
CIRBP-245ENST00000621399 ERI1Q8IV48 349 aaKnown RBP16.06■□□□□ 0.16
CIRBP-245ENST00000621399 OR1F12Q8NHA8 337 aa16.06■□□□□ 0.16
CIRBP-245ENST00000621399 HRASLS5Q96KN8 279 aa16.06■□□□□ 0.16
CIRBP-245ENST00000621399 INTS14Q96SY0 518 aa16.06■□□□□ 0.16
CIRBP-245ENST00000621399 CCL19Q99731 98 aa16.06■□□□□ 0.16
CIRBP-245ENST00000621399 C8orf4Q9NR00 106 aa16.06■□□□□ 0.16
CIRBP-245ENST00000621399 IMPAD1Q9NX62 359 aa16.06■□□□□ 0.16
CIRBP-245ENST00000621399 NKX1-2Q9UD57 310 aaPredicted RBP16.06■□□□□ 0.16
CIRBP-245ENST00000621399 GDF2Q9UK05 429 aaPredicted RBP16.06■□□□□ 0.16
CIRBP-245ENST00000621399 ROS1P08922 2347 aa16.06■□□□□ 0.16
CIRBP-245ENST00000621399 VSTM5A8MXK1 200 aa16.05■□□□□ 0.16
CIRBP-245ENST00000621399 ATE1O95260 518 aa16.05■□□□□ 0.16
CIRBP-245ENST00000621399 FAM157BP0CG42 384 aa16.05■□□□□ 0.16
CIRBP-245ENST00000621399 SLC2A5P22732 501 aa16.05■□□□□ 0.16
CIRBP-245ENST00000621399 APOBEC3AP31941 199 aaPredicted RBP16.05■□□□□ 0.16
CIRBP-245ENST00000621399 TTKP33981 857 aa16.05■□□□□ 0.16
CIRBP-245ENST00000621399 THBS4P35443 961 aa16.05■□□□□ 0.16
CIRBP-245ENST00000621399 NKX6-1P78426 367 aaPredicted RBP16.05■□□□□ 0.16
CIRBP-245ENST00000621399 TEX30Q5JUR7 227 aa16.05■□□□□ 0.16
CIRBP-245ENST00000621399 ELFN2Q5R3F8 820 aa16.05■□□□□ 0.16
CIRBP-245ENST00000621399 ZNF544Q6NX49 715 aa16.05■□□□□ 0.16
CIRBP-245ENST00000621399 CFAP77Q6ZQR2 320 aa16.05■□□□□ 0.16
CIRBP-245ENST00000621399 BCDIN3DQ7Z5W3 292 aaKnown RBP16.05■□□□□ 0.16
CIRBP-245ENST00000621399 FBXL14Q8N1E6 418 aa16.05■□□□□ 0.16
CIRBP-245ENST00000621399 PACRGLQ8N7B6 248 aa16.05■□□□□ 0.16
CIRBP-245ENST00000621399 OR8J1Q8NGP2 316 aa16.05■□□□□ 0.16
CIRBP-245ENST00000621399 FAM81AQ8TBF8 368 aa16.05■□□□□ 0.16
CIRBP-245ENST00000621399 PITX2Q99697 317 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms